EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000020032 (Gene tree)
Gene ID: 101604389
Gene Symbol: Stau1
Alias: 5830401L18Rik
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 20477 bases
Position: chrJH725503.1:7652054-7672530
Accession: 101604389
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000018926	dsrm	PF00035.26	3.3e-30	1	2
ENSJJAP00000018926	dsrm	PF00035.26	3.3e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000025459	-	1733	XM_004663878	ENSJJAP00000018926	489 (aa)	XP_004663935	-

Gene Model

Click here to download ENSJJAG00000020032's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000020032's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000020032	Stau1	96	47.531	ENSJJAG00000020228	Stau2	99	50.473
ENSJJAG00000020032	Stau1	51	32.738	ENSJJAG00000013031	Prkra	88	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000020032	Stau1	100	94.070	ENSG00000124214	STAU1	99	94.070	Homo_sapiens
ENSJJAG00000020032	Stau1	99	72.267	ENSAPOG00000017260	stau1	71	72.267	Acanthochromis_polyacanthus
ENSJJAG00000020032	Stau1	99	91.959	ENSAMEG00000013681	STAU1	69	91.959	Ailuropoda_melanoleuca
ENSJJAG00000020032	Stau1	99	73.824	ENSACIG00000015918	stau1	71	74.490	Amphilophus_citrinellus
ENSJJAG00000020032	Stau1	99	73.279	ENSAOCG00000012224	stau1	71	73.279	Amphiprion_ocellaris
ENSJJAG00000020032	Stau1	99	73.482	ENSAPEG00000012308	stau1	71	73.482	Amphiprion_percula
ENSJJAG00000020032	Stau1	99	73.469	ENSATEG00000024600	stau1	73	73.469	Anabas_testudineus
ENSJJAG00000020032	Stau1	99	85.132	ENSAPLG00000010527	STAU1	69	85.132	Anas_platyrhynchos
ENSJJAG00000020032	Stau1	99	84.756	ENSACAG00000015909	STAU1	70	84.756	Anolis_carolinensis
ENSJJAG00000020032	Stau1	100	92.929	ENSANAG00000032714	STAU1	99	88.548	Aotus_nancymaae
ENSJJAG00000020032	Stau1	99	72.267	ENSACLG00000012270	stau1	71	72.267	Astatotilapia_calliptera
ENSJJAG00000020032	Stau1	100	71.341	ENSAMXG00000016812	stau1	84	71.341	Astyanax_mexicanus
ENSJJAG00000020032	Stau1	100	91.820	ENSBTAG00000000241	STAU1	85	91.820	Bos_taurus
ENSJJAG00000020032	Stau1	100	94.070	ENSCJAG00000016233	STAU1	85	94.070	Callithrix_jacchus
ENSJJAG00000020032	Stau1	100	92.434	ENSCAFG00000011347	STAU1	83	92.434	Canis_familiaris
ENSJJAG00000020032	Stau1	100	91.129	ENSCAFG00020017123	STAU1	82	91.129	Canis_lupus_dingo
ENSJJAG00000020032	Stau1	100	91.616	ENSCHIG00000001799	-	100	84.381	Capra_hircus
ENSJJAG00000020032	Stau1	100	91.207	ENSTSYG00000036179	-	85	91.207	Carlito_syrichta
ENSJJAG00000020032	Stau1	100	91.616	ENSCAPG00000017041	STAU1	99	91.411	Cavia_aperea
ENSJJAG00000020032	Stau1	100	89.697	ENSCPOG00000005566	STAU1	100	89.697	Cavia_porcellus
ENSJJAG00000020032	Stau1	100	92.929	ENSCCAG00000034339	STAU1	85	92.929	Cebus_capucinus
ENSJJAG00000020032	Stau1	100	93.865	ENSCATG00000028474	STAU1	99	92.727	Cercocebus_atys
ENSJJAG00000020032	Stau1	100	76.375	ENSCLAG00000002784	-	98	76.375	Chinchilla_lanigera
ENSJJAG00000020032	Stau1	100	94.141	ENSCLAG00000006516	-	100	94.141	Chinchilla_lanigera
ENSJJAG00000020032	Stau1	100	94.070	ENSCSAG00000014986	STAU1	99	94.070	Chlorocebus_sabaeus
ENSJJAG00000020032	Stau1	100	92.653	ENSCHOG00000001511	STAU1	85	92.449	Choloepus_hoffmanni
ENSJJAG00000020032	Stau1	99	85.163	ENSCPBG00000026741	STAU1	71	85.163	Chrysemys_picta_bellii
ENSJJAG00000020032	Stau1	100	93.661	ENSCANG00000039220	STAU1	99	83.878	Colobus_angolensis_palliatus
ENSJJAG00000020032	Stau1	100	90.707	ENSCGRG00001013453	Stau1	100	90.707	Cricetulus_griseus_chok1gshd
ENSJJAG00000020032	Stau1	100	90.707	ENSCGRG00000007216	Stau1	100	90.707	Cricetulus_griseus_crigri
ENSJJAG00000020032	Stau1	99	67.008	ENSCSEG00000000792	stau1	68	67.755	Cynoglossus_semilaevis
ENSJJAG00000020032	Stau1	99	70.576	ENSCVAG00000005906	stau1	86	71.253	Cyprinodon_variegatus
ENSJJAG00000020032	Stau1	99	71.717	ENSDARG00000044182	stau1	78	71.717	Danio_rerio
ENSJJAG00000020032	Stau1	100	92.653	ENSDNOG00000014933	STAU1	83	91.633	Dasypus_novemcinctus
ENSJJAG00000020032	Stau1	100	90.184	ENSDORG00000030220	Stau1	100	90.184	Dipodomys_ordii
ENSJJAG00000020032	Stau1	85	90.728	ENSETEG00000018235	STAU1	72	90.728	Echinops_telfairi
ENSJJAG00000020032	Stau1	100	92.843	ENSEASG00005023343	STAU1	88	89.459	Equus_asinus_asinus
ENSJJAG00000020032	Stau1	100	92.843	ENSECAG00000012894	STAU1	85	92.843	Equus_caballus
ENSJJAG00000020032	Stau1	81	92.405	ENSEEUG00000014344	STAU1	68	92.405	Erinaceus_europaeus
ENSJJAG00000020032	Stau1	99	71.514	ENSELUG00000002529	stau1	77	71.315	Esox_lucius
ENSJJAG00000020032	Stau1	100	93.661	ENSFCAG00000001447	STAU1	99	86.503	Felis_catus
ENSJJAG00000020032	Stau1	99	84.156	ENSFALG00000012940	STAU1	70	84.156	Ficedula_albicollis
ENSJJAG00000020032	Stau1	99	71.224	ENSFDAG00000020837	-	98	71.370	Fukomys_damarensis
ENSJJAG00000020032	Stau1	100	92.929	ENSFDAG00000014119	-	100	92.929	Fukomys_damarensis
ENSJJAG00000020032	Stau1	99	72.267	ENSFHEG00000013517	stau1	85	72.188	Fundulus_heteroclitus
ENSJJAG00000020032	Stau1	99	61.765	ENSGMOG00000016850	stau1	71	61.765	Gadus_morhua
ENSJJAG00000020032	Stau1	99	86.626	ENSGALG00000004736	STAU1	70	86.626	Gallus_gallus
ENSJJAG00000020032	Stau1	99	72.617	ENSGAFG00000010437	stau1	71	72.617	Gambusia_affinis
ENSJJAG00000020032	Stau1	99	72.525	ENSGACG00000001352	stau1	72	72.525	Gasterosteus_aculeatus
ENSJJAG00000020032	Stau1	99	85.802	ENSGAGG00000009825	STAU1	70	85.802	Gopherus_agassizii
ENSJJAG00000020032	Stau1	100	93.131	ENSGGOG00000025351	STAU1	100	94.521	Gorilla_gorilla
ENSJJAG00000020032	Stau1	99	72.470	ENSHBUG00000023668	stau1	71	72.470	Haplochromis_burtoni
ENSJJAG00000020032	Stau1	100	94.888	ENSHGLG00000008730	STAU1	100	94.888	Heterocephalus_glaber_female
ENSJJAG00000020032	Stau1	100	94.888	ENSHGLG00100000098	STAU1	100	94.888	Heterocephalus_glaber_male
ENSJJAG00000020032	Stau1	99	70.061	ENSHCOG00000018461	stau1	70	70.061	Hippocampus_comes
ENSJJAG00000020032	Stau1	94	71.490	ENSIPUG00000023725	stau1	70	71.490	Ictalurus_punctatus
ENSJJAG00000020032	Stau1	100	94.683	ENSSTOG00000003634	STAU1	100	94.683	Ictidomys_tridecemlineatus
ENSJJAG00000020032	Stau1	99	70.287	ENSKMAG00000007135	stau1	71	70.961	Kryptolebias_marmoratus
ENSJJAG00000020032	Stau1	99	70.741	ENSLBEG00000020172	stau1	71	70.741	Labrus_bergylta
ENSJJAG00000020032	Stau1	99	80.982	ENSLACG00000016157	STAU1	70	79.678	Latimeria_chalumnae
ENSJJAG00000020032	Stau1	99	77.143	ENSLOCG00000003134	stau1	71	77.143	Lepisosteus_oculatus
ENSJJAG00000020032	Stau1	100	91.411	ENSLAFG00000003238	STAU1	96	91.411	Loxodonta_africana
ENSJJAG00000020032	Stau1	100	93.865	ENSMFAG00000040931	STAU1	99	96.679	Macaca_fascicularis
ENSJJAG00000020032	Stau1	100	92.727	ENSMMUG00000002302	STAU1	99	96.679	Macaca_mulatta
ENSJJAG00000020032	Stau1	100	93.865	ENSMNEG00000033821	STAU1	99	92.727	Macaca_nemestrina
ENSJJAG00000020032	Stau1	100	93.865	ENSMLEG00000031383	STAU1	85	93.865	Mandrillus_leucophaeus
ENSJJAG00000020032	Stau1	99	74.082	ENSMAMG00000017586	stau1	74	74.082	Mastacembelus_armatus
ENSJJAG00000020032	Stau1	99	72.267	ENSMZEG00005015605	stau1	82	72.267	Maylandia_zebra
ENSJJAG00000020032	Stau1	99	85.336	ENSMGAG00000004719	STAU1	69	85.336	Meleagris_gallopavo
ENSJJAG00000020032	Stau1	100	90.505	ENSMAUG00000013846	Stau1	100	90.505	Mesocricetus_auratus
ENSJJAG00000020032	Stau1	100	91.717	ENSMICG00000001995	STAU1	85	91.717	Microcebus_murinus
ENSJJAG00000020032	Stau1	100	91.820	ENSMOCG00000018743	Stau1	100	91.515	Microtus_ochrogaster
ENSJJAG00000020032	Stau1	100	71.429	ENSMMOG00000015455	stau1	98	71.487	Mola_mola
ENSJJAG00000020032	Stau1	100	89.571	ENSMODG00000016276	STAU1	73	89.571	Monodelphis_domestica
ENSJJAG00000020032	Stau1	99	73.279	ENSMALG00000000045	stau1	71	73.279	Monopterus_albus
ENSJJAG00000020032	Stau1	100	91.411	MGP_CAROLIEiJ_G0024699	Stau1	100	91.411	Mus_caroli
ENSJJAG00000020032	Stau1	100	91.002	ENSMUSG00000039536	Stau1	100	91.002	Mus_musculus
ENSJJAG00000020032	Stau1	100	91.002	MGP_PahariEiJ_G0026141	Stau1	100	91.002	Mus_pahari
ENSJJAG00000020032	Stau1	100	90.593	MGP_SPRETEiJ_G0025619	Stau1	100	90.593	Mus_spretus
ENSJJAG00000020032	Stau1	99	92.990	ENSMPUG00000017581	STAU1	72	92.990	Mustela_putorius_furo
ENSJJAG00000020032	Stau1	100	92.434	ENSMLUG00000008407	STAU1	83	92.434	Myotis_lucifugus
ENSJJAG00000020032	Stau1	100	92.929	ENSNGAG00000007108	Stau1	100	92.929	Nannospalax_galili
ENSJJAG00000020032	Stau1	99	72.470	ENSNBRG00000017596	stau1	71	72.470	Neolamprologus_brichardi
ENSJJAG00000020032	Stau1	100	93.865	ENSNLEG00000006955	STAU1	99	92.727	Nomascus_leucogenys
ENSJJAG00000020032	Stau1	94	89.610	ENSMEUG00000003263	STAU1	80	89.610	Notamacropus_eugenii
ENSJJAG00000020032	Stau1	100	91.633	ENSOPRG00000014569	STAU1	86	91.633	Ochotona_princeps
ENSJJAG00000020032	Stau1	100	94.274	ENSODEG00000006523	STAU1	99	94.274	Octodon_degus
ENSJJAG00000020032	Stau1	99	72.672	ENSONIG00000004152	stau1	68	72.672	Oreochromis_niloticus
ENSJJAG00000020032	Stau1	99	84.959	ENSOANG00000006394	STAU1	70	84.959	Ornithorhynchus_anatinus
ENSJJAG00000020032	Stau1	100	92.434	ENSOCUG00000006214	STAU1	85	92.434	Oryctolagus_cuniculus
ENSJJAG00000020032	Stau1	99	70.935	ENSOMEG00000002388	stau1	71	70.935	Oryzias_melastigma
ENSJJAG00000020032	Stau1	100	93.252	ENSOGAG00000002127	STAU1	83	93.252	Otolemur_garnettii
ENSJJAG00000020032	Stau1	100	64.056	ENSOGAG00000028222	-	98	62.978	Otolemur_garnettii
ENSJJAG00000020032	Stau1	100	91.616	ENSOARG00000012204	STAU1	83	91.616	Ovis_aries
ENSJJAG00000020032	Stau1	100	93.131	ENSPPAG00000032023	STAU1	100	94.521	Pan_paniscus
ENSJJAG00000020032	Stau1	100	93.661	ENSPPRG00000003436	STAU1	99	93.661	Panthera_pardus
ENSJJAG00000020032	Stau1	100	93.661	ENSPTIG00000011768	STAU1	99	92.339	Panthera_tigris_altaica
ENSJJAG00000020032	Stau1	100	93.131	ENSPTRG00000023130	STAU1	100	94.521	Pan_troglodytes
ENSJJAG00000020032	Stau1	100	93.865	ENSPANG00000020560	STAU1	99	87.551	Papio_anubis
ENSJJAG00000020032	Stau1	99	72.874	ENSPKIG00000024588	stau1	71	72.874	Paramormyrops_kingsleyae
ENSJJAG00000020032	Stau1	99	85.597	ENSPSIG00000010731	STAU1	70	85.597	Pelodiscus_sinensis
ENSJJAG00000020032	Stau1	99	73.171	ENSPMGG00000018553	stau1	98	70.637	Periophthalmus_magnuspinnatus
ENSJJAG00000020032	Stau1	100	90.707	ENSPEMG00000022045	Stau1	100	90.707	Peromyscus_maniculatus_bairdii
ENSJJAG00000020032	Stau1	100	89.571	ENSPCIG00000023269	STAU1	99	84.663	Phascolarctos_cinereus
ENSJJAG00000020032	Stau1	99	72.874	ENSPFOG00000017253	stau1	71	72.874	Poecilia_formosa
ENSJJAG00000020032	Stau1	63	65.705	ENSPLAG00000014829	stau1	78	66.026	Poecilia_latipinna
ENSJJAG00000020032	Stau1	93	72.078	ENSPMEG00000007495	stau1	67	72.078	Poecilia_mexicana
ENSJJAG00000020032	Stau1	99	72.267	ENSPREG00000003477	stau1	71	72.267	Poecilia_reticulata
ENSJJAG00000020032	Stau1	100	94.070	ENSPPYG00000011111	STAU1	85	94.070	Pongo_abelii
ENSJJAG00000020032	Stau1	93	82.895	ENSPCAG00000002459	STAU1	84	82.895	Procavia_capensis
ENSJJAG00000020032	Stau1	100	93.047	ENSPCOG00000027746	STAU1	99	91.919	Propithecus_coquereli
ENSJJAG00000020032	Stau1	84	94.702	ENSPVAG00000015019	STAU1	71	94.702	Pteropus_vampyrus
ENSJJAG00000020032	Stau1	99	72.470	ENSPNYG00000014436	stau1	71	72.470	Pundamilia_nyererei
ENSJJAG00000020032	Stau1	99	70.624	ENSPNAG00000011323	stau1	77	70.020	Pygocentrus_nattereri
ENSJJAG00000020032	Stau1	100	90.303	ENSRNOG00000007781	Stau1	100	90.303	Rattus_norvegicus
ENSJJAG00000020032	Stau1	100	92.727	ENSRBIG00000037345	STAU1	99	92.727	Rhinopithecus_bieti
ENSJJAG00000020032	Stau1	100	93.865	ENSRROG00000039008	STAU1	99	92.683	Rhinopithecus_roxellana
ENSJJAG00000020032	Stau1	100	94.070	ENSSBOG00000034448	STAU1	99	90.020	Saimiri_boliviensis_boliviensis
ENSJJAG00000020032	Stau1	100	89.571	ENSSHAG00000009492	STAU1	83	89.571	Sarcophilus_harrisii
ENSJJAG00000020032	Stau1	99	74.490	ENSSFOG00015021497	stau1	85	71.373	Scleropages_formosus
ENSJJAG00000020032	Stau1	99	72.672	ENSSMAG00000017410	stau1	71	72.672	Scophthalmus_maximus
ENSJJAG00000020032	Stau1	99	74.089	ENSSDUG00000019439	stau1	71	74.089	Seriola_dumerili
ENSJJAG00000020032	Stau1	99	74.089	ENSSLDG00000025040	stau1	71	74.089	Seriola_lalandi_dorsalis
ENSJJAG00000020032	Stau1	99	84.553	ENSSPUG00000017983	STAU1	73	84.521	Sphenodon_punctatus
ENSJJAG00000020032	Stau1	99	73.482	ENSSPAG00000019275	stau1	71	73.482	Stegastes_partitus
ENSJJAG00000020032	Stau1	100	93.047	ENSSSCG00000027444	STAU1	99	93.047	Sus_scrofa
ENSJJAG00000020032	Stau1	99	83.943	ENSTGUG00000008784	STAU1	69	83.943	Taeniopygia_guttata
ENSJJAG00000020032	Stau1	99	73.265	ENSTRUG00000005837	stau1	70	73.931	Takifugu_rubripes
ENSJJAG00000020032	Stau1	99	72.323	ENSTNIG00000014732	stau1	73	72.323	Tetraodon_nigroviridis
ENSJJAG00000020032	Stau1	100	78.571	ENSTBEG00000009404	STAU1	85	78.571	Tupaia_belangeri
ENSJJAG00000020032	Stau1	94	89.394	ENSTTRG00000004285	STAU1	80	89.394	Tursiops_truncatus
ENSJJAG00000020032	Stau1	100	90.726	ENSUAMG00000025449	STAU1	99	90.726	Ursus_americanus
ENSJJAG00000020032	Stau1	74	87.871	ENSUMAG00000024475	STAU1	87	87.871	Ursus_maritimus
ENSJJAG00000020032	Stau1	100	92.843	ENSVPAG00000001313	STAU1	85	92.843	Vicugna_pacos
ENSJJAG00000020032	Stau1	100	91.331	ENSVVUG00000022325	STAU1	73	91.331	Vulpes_vulpes
ENSJJAG00000020032	Stau1	99	79.218	ENSXETG00000001783	stau1	70	79.424	Xenopus_tropicalis
ENSJJAG00000020032	Stau1	54	68.657	ENSXCOG00000008804	stau1	72	66.549	Xiphophorus_couchianus
ENSJJAG00000020032	Stau1	99	72.617	ENSXMAG00000016175	stau1	71	72.617	Xiphophorus_maculatus