EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000020069 (Gene tree)
Gene ID: 101610404
Gene Symbol: Fubp1
Alias: 9530027K12Rik|FBP|Fubp|Fubp4
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 37073 bases
Position: chrJH725448.1:26363077-26400149
Accession: 101610404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000019008	KH_1	PF00013.29	2.3e-69	1	4
ENSJJAP00000019008	KH_1	PF00013.29	2.3e-69	2	4
ENSJJAP00000019008	KH_1	PF00013.29	2.3e-69	3	4
ENSJJAP00000019008	KH_1	PF00013.29	2.3e-69	4	4
ENSJJAP00000019000	KH_1	PF00013.29	2.4e-69	1	4
ENSJJAP00000019000	KH_1	PF00013.29	2.4e-69	2	4
ENSJJAP00000019000	KH_1	PF00013.29	2.4e-69	3	4
ENSJJAP00000019000	KH_1	PF00013.29	2.4e-69	4	4
ENSJJAP00000018985	KH_1	PF00013.29	5.9e-17	1	1
ENSJJAP00000019008	KH_2	PF07650.17	1.5e-22	1	2
ENSJJAP00000019008	KH_2	PF07650.17	1.5e-22	2	2
ENSJJAP00000019000	KH_2	PF07650.17	1.7e-22	1	2
ENSJJAP00000019000	KH_2	PF07650.17	1.7e-22	2	2
ENSJJAP00000018985	KH_2	PF07650.17	1.9e-06	1	1
ENSJJAP00000019008	DUF1897	PF09005.10	7.9e-12	1	2
ENSJJAP00000019008	DUF1897	PF09005.10	7.9e-12	2	2
ENSJJAP00000019000	DUF1897	PF09005.10	8e-12	1	2
ENSJJAP00000019000	DUF1897	PF09005.10	8e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000025519	-	2807	-	ENSJJAP00000018985	146 (aa)	-	-
ENSJJAT00000025534	-	2694	XM_004653638	ENSJJAP00000019000	646 (aa)	XP_004653695	UPI000332EC76
ENSJJAT00000025542	-	1938	XM_004653639	ENSJJAP00000019008	645 (aa)	XP_004653696	-

Gene Model

Click here to download ENSJJAG00000020069's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000020069's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000020069	Fubp1	53	30.857	ENSJJAG00000000944	Nova2	95	36.765
ENSJJAG00000020069	Fubp1	96	52.778	ENSJJAG00000009992	Fubp3	73	65.534
ENSJJAG00000020069	Fubp1	56	34.524	ENSJJAG00000016235	Pcbp4	74	34.524
ENSJJAG00000020069	Fubp1	53	40.625	ENSJJAG00000021192	Pcbp3	58	40.625
ENSJJAG00000020069	Fubp1	55	30.357	ENSJJAG00000011174	Igf2bp3	65	30.357
ENSJJAG00000020069	Fubp1	93	59.624	ENSJJAG00000006370	Khsrp	57	66.514
ENSJJAG00000020069	Fubp1	56	36.364	ENSJJAG00000012915	Nova1	56	36.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000020069	Fubp1	100	100.000	ENSG00000162613	FUBP1	100	98.145	Homo_sapiens
ENSJJAG00000020069	Fubp1	100	70.270	ENSAPOG00000014845	fubp1	70	76.211	Acanthochromis_polyacanthus
ENSJJAG00000020069	Fubp1	100	100.000	ENSAMEG00000007372	FUBP1	100	94.925	Ailuropoda_melanoleuca
ENSJJAG00000020069	Fubp1	100	70.270	ENSACIG00000020024	fubp1	69	74.099	Amphilophus_citrinellus
ENSJJAG00000020069	Fubp1	100	70.270	ENSAPEG00000012232	fubp1	72	78.667	Amphiprion_percula
ENSJJAG00000020069	Fubp1	99	72.488	ENSATEG00000018619	fubp1	70	78.366	Anabas_testudineus
ENSJJAG00000020069	Fubp1	100	95.918	ENSAPLG00000005965	FUBP1	100	97.190	Anas_platyrhynchos
ENSJJAG00000020069	Fubp1	95	92.086	ENSACAG00000006310	FUBP1	96	86.880	Anolis_carolinensis
ENSJJAG00000020069	Fubp1	99	71.692	ENSACLG00000006708	fubp1	72	79.505	Astatotilapia_calliptera
ENSJJAG00000020069	Fubp1	100	78.912	ENSAMXG00000005525	fubp1	64	86.047	Astyanax_mexicanus
ENSJJAG00000020069	Fubp1	100	100.000	ENSCJAG00000007062	FUBP1	100	98.452	Callithrix_jacchus
ENSJJAG00000020069	Fubp1	100	100.000	ENSCAFG00000020361	FUBP1	100	98.300	Canis_familiaris
ENSJJAG00000020069	Fubp1	100	99.315	ENSTSYG00000000148	FUBP1	100	98.188	Carlito_syrichta
ENSJJAG00000020069	Fubp1	57	98.168	ENSCAPG00000011052	-	67	98.168	Cavia_aperea
ENSJJAG00000020069	Fubp1	100	99.315	ENSCPOG00000002757	FUBP1	100	97.987	Cavia_porcellus
ENSJJAG00000020069	Fubp1	100	98.496	ENSCCAG00000036537	FUBP1	100	84.104	Cebus_capucinus
ENSJJAG00000020069	Fubp1	100	100.000	ENSCATG00000042126	FUBP1	100	98.145	Cercocebus_atys
ENSJJAG00000020069	Fubp1	100	100.000	ENSCLAG00000005621	FUBP1	100	100.000	Chinchilla_lanigera
ENSJJAG00000020069	Fubp1	100	100.000	ENSCSAG00000001402	FUBP1	100	98.145	Chlorocebus_sabaeus
ENSJJAG00000020069	Fubp1	100	98.630	ENSCHOG00000008177	FUBP1	100	96.336	Choloepus_hoffmanni
ENSJJAG00000020069	Fubp1	100	100.000	ENSCGRG00001007103	Fubp1	100	97.836	Cricetulus_griseus_chok1gshd
ENSJJAG00000020069	Fubp1	100	100.000	ENSCGRG00000003372	Fubp1	100	98.517	Cricetulus_griseus_crigri
ENSJJAG00000020069	Fubp1	100	70.579	ENSCSEG00000021412	fubp1	70	77.042	Cynoglossus_semilaevis
ENSJJAG00000020069	Fubp1	100	70.270	ENSCVAG00000014487	fubp1	60	84.703	Cyprinodon_variegatus
ENSJJAG00000020069	Fubp1	100	72.603	ENSDARG00000029248	fubp1	99	69.863	Danio_rerio
ENSJJAG00000020069	Fubp1	85	67.901	ENSDNOG00000034565	-	83	70.732	Dasypus_novemcinctus
ENSJJAG00000020069	Fubp1	100	99.315	ENSDORG00000016534	Fubp1	100	96.031	Dipodomys_ordii
ENSJJAG00000020069	Fubp1	76	97.688	ENSETEG00000000948	-	62	96.199	Echinops_telfairi
ENSJJAG00000020069	Fubp1	84	47.350	ENSEBUG00000016143	fubp1	67	58.462	Eptatretus_burgeri
ENSJJAG00000020069	Fubp1	100	100.000	ENSEEUG00000001287	FUBP1	89	97.917	Erinaceus_europaeus
ENSJJAG00000020069	Fubp1	100	76.190	ENSELUG00000007990	fubp1	70	74.459	Esox_lucius
ENSJJAG00000020069	Fubp1	100	95.918	ENSFALG00000005768	FUBP1	97	96.124	Ficedula_albicollis
ENSJJAG00000020069	Fubp1	100	100.000	ENSFDAG00000014210	FUBP1	100	100.000	Fukomys_damarensis
ENSJJAG00000020069	Fubp1	100	71.450	ENSFHEG00000005230	fubp1	70	79.018	Fundulus_heteroclitus
ENSJJAG00000020069	Fubp1	100	65.854	ENSGMOG00000003370	fubp1	70	70.628	Gadus_morhua
ENSJJAG00000020069	Fubp1	100	96.451	ENSGALG00000008939	FUBP1	100	96.451	Gallus_gallus
ENSJJAG00000020069	Fubp1	100	70.270	ENSGAFG00000020972	fubp1	91	79.582	Gambusia_affinis
ENSJJAG00000020069	Fubp1	100	70.167	ENSGACG00000016563	fubp1	70	76.770	Gasterosteus_aculeatus
ENSJJAG00000020069	Fubp1	100	70.431	ENSHBUG00000009835	fubp1	85	77.852	Haplochromis_burtoni
ENSJJAG00000020069	Fubp1	86	93.600	ENSHGLG00000002808	-	72	91.429	Heterocephalus_glaber_female
ENSJJAG00000020069	Fubp1	100	100.000	ENSHGLG00000008415	-	100	100.000	Heterocephalus_glaber_female
ENSJJAG00000020069	Fubp1	86	93.600	ENSHGLG00100001414	-	72	92.088	Heterocephalus_glaber_male
ENSJJAG00000020069	Fubp1	100	100.000	ENSHGLG00100003417	-	100	98.918	Heterocephalus_glaber_male
ENSJJAG00000020069	Fubp1	100	69.595	ENSHCOG00000000910	fubp1	70	75.271	Hippocampus_comes
ENSJJAG00000020069	Fubp1	100	78.912	ENSIPUG00000009896	fubp1	70	78.125	Ictalurus_punctatus
ENSJJAG00000020069	Fubp1	100	100.000	ENSSTOG00000014312	FUBP1	100	98.300	Ictidomys_tridecemlineatus
ENSJJAG00000020069	Fubp1	100	70.795	ENSKMAG00000018897	fubp1	69	78.153	Kryptolebias_marmoratus
ENSJJAG00000020069	Fubp1	100	69.595	ENSLBEG00000012700	fubp1	72	75.322	Labrus_bergylta
ENSJJAG00000020069	Fubp1	96	81.560	ENSLOCG00000003745	fubp1	92	73.975	Lepisosteus_oculatus
ENSJJAG00000020069	Fubp1	100	100.000	ENSLAFG00000003273	FUBP1	100	97.297	Loxodonta_africana
ENSJJAG00000020069	Fubp1	100	100.000	ENSMFAG00000031825	FUBP1	100	98.297	Macaca_fascicularis
ENSJJAG00000020069	Fubp1	100	100.000	ENSMMUG00000002899	FUBP1	100	98.145	Macaca_mulatta
ENSJJAG00000020069	Fubp1	100	100.000	ENSMNEG00000045212	FUBP1	100	98.145	Macaca_nemestrina
ENSJJAG00000020069	Fubp1	100	71.779	ENSMZEG00005024298	fubp1	70	79.018	Maylandia_zebra
ENSJJAG00000020069	Fubp1	100	95.918	ENSMGAG00000009424	FUBP1	100	96.711	Meleagris_gallopavo
ENSJJAG00000020069	Fubp1	100	99.315	ENSMAUG00000016428	Fubp1	98	99.315	Mesocricetus_auratus
ENSJJAG00000020069	Fubp1	100	100.000	ENSMOCG00000014751	Fubp1	100	98.658	Microtus_ochrogaster
ENSJJAG00000020069	Fubp1	100	68.919	ENSMMOG00000019463	fubp1	64	82.535	Mola_mola
ENSJJAG00000020069	Fubp1	100	86.747	ENSMODG00000020804	FUBP1	100	89.812	Monodelphis_domestica
ENSJJAG00000020069	Fubp1	100	71.057	ENSMALG00000015173	fubp1	70	77.455	Monopterus_albus
ENSJJAG00000020069	Fubp1	100	100.000	MGP_CAROLIEiJ_G0025740	Fubp1	100	98.142	Mus_caroli
ENSJJAG00000020069	Fubp1	100	99.315	ENSMUSG00000028034	Fubp1	100	97.833	Mus_musculus
ENSJJAG00000020069	Fubp1	100	100.000	MGP_PahariEiJ_G0027191	Fubp1	100	98.297	Mus_pahari
ENSJJAG00000020069	Fubp1	100	100.000	MGP_SPRETEiJ_G0026693	Fubp1	98	100.000	Mus_spretus
ENSJJAG00000020069	Fubp1	100	98.630	ENSMLUG00000014802	FUBP1	100	94.188	Myotis_lucifugus
ENSJJAG00000020069	Fubp1	100	100.000	ENSNGAG00000014302	Fubp1	98	100.000	Nannospalax_galili
ENSJJAG00000020069	Fubp1	100	70.270	ENSNBRG00000015099	fubp1	72	79.505	Neolamprologus_brichardi
ENSJJAG00000020069	Fubp1	100	100.000	ENSNLEG00000009772	FUBP1	100	94.368	Nomascus_leucogenys
ENSJJAG00000020069	Fubp1	92	100.000	ENSMEUG00000007917	-	79	100.000	Notamacropus_eugenii
ENSJJAG00000020069	Fubp1	91	97.260	ENSOPRG00000001175	FUBP1	91	97.260	Ochotona_princeps
ENSJJAG00000020069	Fubp1	100	100.000	ENSODEG00000002600	-	100	100.000	Octodon_degus
ENSJJAG00000020069	Fubp1	100	69.178	ENSODEG00000003657	-	99	66.139	Octodon_degus
ENSJJAG00000020069	Fubp1	100	70.270	ENSONIG00000018381	fubp1	69	79.018	Oreochromis_niloticus
ENSJJAG00000020069	Fubp1	100	98.630	ENSOANG00000009777	FUBP1	99	91.790	Ornithorhynchus_anatinus
ENSJJAG00000020069	Fubp1	99	70.078	ENSORLG00000003540	fubp1	71	78.652	Oryzias_latipes
ENSJJAG00000020069	Fubp1	100	68.925	ENSORLG00020005908	fubp1	70	78.604	Oryzias_latipes_hni
ENSJJAG00000020069	Fubp1	98	72.038	ENSORLG00015008779	fubp1	70	78.604	Oryzias_latipes_hsok
ENSJJAG00000020069	Fubp1	100	69.706	ENSOMEG00000021943	fubp1	70	77.027	Oryzias_melastigma
ENSJJAG00000020069	Fubp1	100	100.000	ENSOGAG00000014233	FUBP1	100	94.643	Otolemur_garnettii
ENSJJAG00000020069	Fubp1	100	100.000	ENSOARG00000013259	FUBP1	100	95.195	Ovis_aries
ENSJJAG00000020069	Fubp1	100	100.000	ENSPPRG00000000413	FUBP1	100	98.300	Panthera_pardus
ENSJJAG00000020069	Fubp1	100	100.000	ENSPTIG00000019450	FUBP1	100	98.300	Panthera_tigris_altaica
ENSJJAG00000020069	Fubp1	100	96.599	ENSPSIG00000012965	FUBP1	100	96.303	Pelodiscus_sinensis
ENSJJAG00000020069	Fubp1	98	72.571	ENSPMGG00000009060	fubp1	71	76.471	Periophthalmus_magnuspinnatus
ENSJJAG00000020069	Fubp1	100	99.315	ENSPEMG00000021802	Fubp1	100	99.315	Peromyscus_maniculatus_bairdii
ENSJJAG00000020069	Fubp1	57	61.966	ENSPMAG00000001644	-	90	63.063	Petromyzon_marinus
ENSJJAG00000020069	Fubp1	100	70.270	ENSPLAG00000021170	fubp1	72	79.018	Poecilia_latipinna
ENSJJAG00000020069	Fubp1	99	72.488	ENSPMEG00000004747	fubp1	73	79.018	Poecilia_mexicana
ENSJJAG00000020069	Fubp1	99	71.516	ENSPREG00000017911	fubp1	70	79.018	Poecilia_reticulata
ENSJJAG00000020069	Fubp1	71	99.349	ENSPPYG00000001219	-	70	99.349	Pongo_abelii
ENSJJAG00000020069	Fubp1	100	100.000	ENSPCAG00000012617	FUBP1	100	96.330	Procavia_capensis
ENSJJAG00000020069	Fubp1	100	100.000	ENSPCOG00000024974	FUBP1	100	98.300	Propithecus_coquereli
ENSJJAG00000020069	Fubp1	99	93.808	ENSPVAG00000014637	FUBP1	100	92.061	Pteropus_vampyrus
ENSJJAG00000020069	Fubp1	100	71.779	ENSPNYG00000004552	fubp1	73	79.642	Pundamilia_nyererei
ENSJJAG00000020069	Fubp1	100	79.592	ENSPNAG00000016207	fubp1	87	77.681	Pygocentrus_nattereri
ENSJJAG00000020069	Fubp1	100	100.000	ENSRNOG00000043370	Fubp1	100	98.297	Rattus_norvegicus
ENSJJAG00000020069	Fubp1	100	100.000	ENSRBIG00000042950	FUBP1	100	98.145	Rhinopithecus_bieti
ENSJJAG00000020069	Fubp1	100	100.000	ENSRROG00000043534	FUBP1	100	98.145	Rhinopithecus_roxellana
ENSJJAG00000020069	Fubp1	100	100.000	ENSSBOG00000027299	FUBP1	100	98.300	Saimiri_boliviensis_boliviensis
ENSJJAG00000020069	Fubp1	100	98.630	ENSSHAG00000005367	FUBP1	100	97.297	Sarcophilus_harrisii
ENSJJAG00000020069	Fubp1	100	77.551	ENSSFOG00015010213	fubp1	70	79.379	Scleropages_formosus
ENSJJAG00000020069	Fubp1	100	70.270	ENSSDUG00000007383	fubp1	68	76.906	Seriola_dumerili
ENSJJAG00000020069	Fubp1	100	70.376	ENSSLDG00000022863	fubp1	72	77.181	Seriola_lalandi_dorsalis
ENSJJAG00000020069	Fubp1	99	96.774	ENSSARG00000011730	FUBP1	57	100.000	Sorex_araneus
ENSJJAG00000020069	Fubp1	99	88.253	ENSSPUG00000008389	FUBP1	100	85.735	Sphenodon_punctatus
ENSJJAG00000020069	Fubp1	98	73.585	ENSSPAG00000010161	fubp1	69	79.279	Stegastes_partitus
ENSJJAG00000020069	Fubp1	100	92.157	ENSTGUG00000006841	FUBP1	100	96.072	Taeniopygia_guttata
ENSJJAG00000020069	Fubp1	100	69.863	ENSTRUG00000004615	fubp1	65	78.300	Takifugu_rubripes
ENSJJAG00000020069	Fubp1	50	84.459	ENSTNIG00000019815	-	88	84.459	Tetraodon_nigroviridis
ENSJJAG00000020069	Fubp1	82	99.405	ENSTBEG00000017333	FUBP1	67	99.405	Tupaia_belangeri
ENSJJAG00000020069	Fubp1	100	100.000	ENSTTRG00000000096	FUBP1	100	96.336	Tursiops_truncatus
ENSJJAG00000020069	Fubp1	100	100.000	ENSVPAG00000004709	FUBP1	99	98.142	Vicugna_pacos
ENSJJAG00000020069	Fubp1	100	68.721	ENSXCOG00000019354	fubp1	72	78.348	Xiphophorus_couchianus
ENSJJAG00000020069	Fubp1	100	70.270	ENSXMAG00000007168	fubp1	73	78.795	Xiphophorus_maculatus