EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000020168 (Gene tree)
Gene ID: 101601897
Gene Symbol: Synj1
Alias: A930006D20Rik
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 92004 bases
Position: chrJH725450.1:28816940-28908943
Accession: 101601897
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000019155	Exo_endo_phos	PF03372.23	7.2e-15	1	1
ENSJJAP00000019155	DUF1866	PF08952.11	5.8e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000025691	-	4587	XM_012947904	ENSJJAP00000019155	1528 (aa)	XP_012803358	-

Gene Model

Click here to download ENSJJAG00000020168's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000020168's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000020168	Synj1	81	45.482	ENSJJAG00000014436	Synj2	83	53.014

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000020168	Synj1	100	85.660	ENSG00000159082	SYNJ1	98	88.066	Homo_sapiens
ENSJJAG00000020168	Synj1	76	68.208	ENSAPOG00000002809	synj1	92	66.331	Acanthochromis_polyacanthus
ENSJJAG00000020168	Synj1	100	84.397	ENSAMEG00000015028	SYNJ1	98	84.460	Ailuropoda_melanoleuca
ENSJJAG00000020168	Synj1	85	62.288	ENSACIG00000008857	synj1	97	62.949	Amphilophus_citrinellus
ENSJJAG00000020168	Synj1	89	66.833	ENSAOCG00000009835	synj1	96	63.362	Amphiprion_ocellaris
ENSJJAG00000020168	Synj1	69	70.347	ENSAPEG00000021010	synj1	91	57.543	Amphiprion_percula
ENSJJAG00000020168	Synj1	92	59.907	ENSATEG00000002306	synj1	89	58.094	Anabas_testudineus
ENSJJAG00000020168	Synj1	100	73.325	ENSAPLG00000011832	SYNJ1	100	73.029	Anas_platyrhynchos
ENSJJAG00000020168	Synj1	82	78.407	ENSACAG00000003006	-	98	78.132	Anolis_carolinensis
ENSJJAG00000020168	Synj1	100	85.714	ENSANAG00000027325	SYNJ1	98	88.075	Aotus_nancymaae
ENSJJAG00000020168	Synj1	81	65.298	ENSACLG00000002255	synj1	98	62.676	Astatotilapia_calliptera
ENSJJAG00000020168	Synj1	68	72.136	ENSAMXG00000008208	synj1	95	57.233	Astyanax_mexicanus
ENSJJAG00000020168	Synj1	100	83.133	ENSBTAG00000003063	SYNJ1	98	87.132	Bos_taurus
ENSJJAG00000020168	Synj1	100	85.913	ENSCJAG00000009187	SYNJ1	98	88.153	Callithrix_jacchus
ENSJJAG00000020168	Synj1	100	85.206	ENSCAFG00000009041	SYNJ1	100	85.206	Canis_familiaris
ENSJJAG00000020168	Synj1	100	82.650	ENSCAFG00020025776	SYNJ1	100	81.496	Canis_lupus_dingo
ENSJJAG00000020168	Synj1	100	81.778	ENSCHIG00000005095	SYNJ1	100	81.749	Capra_hircus
ENSJJAG00000020168	Synj1	100	85.461	ENSTSYG00000014541	SYNJ1	98	87.754	Carlito_syrichta
ENSJJAG00000020168	Synj1	93	71.366	ENSCAPG00000014483	SYNJ1	99	72.750	Cavia_aperea
ENSJJAG00000020168	Synj1	100	84.747	ENSCPOG00000012182	SYNJ1	99	88.006	Cavia_porcellus
ENSJJAG00000020168	Synj1	100	81.254	ENSCCAG00000020825	SYNJ1	98	87.841	Cebus_capucinus
ENSJJAG00000020168	Synj1	100	85.471	ENSCATG00000033891	SYNJ1	98	87.988	Cercocebus_atys
ENSJJAG00000020168	Synj1	100	86.104	ENSCLAG00000009796	SYNJ1	100	86.869	Chinchilla_lanigera
ENSJJAG00000020168	Synj1	82	88.812	ENSCSAG00000009654	SYNJ1	98	89.002	Chlorocebus_sabaeus
ENSJJAG00000020168	Synj1	84	91.531	ENSCHOG00000012390	SYNJ1	87	91.531	Choloepus_hoffmanni
ENSJJAG00000020168	Synj1	78	82.439	ENSCPBG00000006402	SYNJ1	97	82.195	Chrysemys_picta_bellii
ENSJJAG00000020168	Synj1	100	85.471	ENSCANG00000031359	SYNJ1	98	88.066	Colobus_angolensis_palliatus
ENSJJAG00000020168	Synj1	100	83.481	ENSCGRG00001010861	Synj1	99	88.159	Cricetulus_griseus_chok1gshd
ENSJJAG00000020168	Synj1	82	88.159	ENSCGRG00000015749	Synj1	99	88.159	Cricetulus_griseus_crigri
ENSJJAG00000020168	Synj1	69	70.481	ENSCSEG00000019614	synj1	99	63.253	Cynoglossus_semilaevis
ENSJJAG00000020168	Synj1	68	68.182	ENSCVAG00000019250	synj1	96	61.859	Cyprinodon_variegatus
ENSJJAG00000020168	Synj1	68	71.494	ENSDARG00000025011	synj1	98	63.346	Danio_rerio
ENSJJAG00000020168	Synj1	100	80.202	ENSDNOG00000010732	SYNJ1	99	80.454	Dasypus_novemcinctus
ENSJJAG00000020168	Synj1	76	93.841	ENSETEG00000018674	SYNJ1	75	93.841	Echinops_telfairi
ENSJJAG00000020168	Synj1	100	83.019	ENSEASG00005006287	SYNJ1	98	88.377	Equus_asinus_asinus
ENSJJAG00000020168	Synj1	100	84.237	ENSECAG00000004829	SYNJ1	100	84.741	Equus_caballus
ENSJJAG00000020168	Synj1	87	93.583	ENSEEUG00000005150	SYNJ1	87	93.583	Erinaceus_europaeus
ENSJJAG00000020168	Synj1	92	57.985	ENSELUG00000009731	synj1	82	65.893	Esox_lucius
ENSJJAG00000020168	Synj1	100	82.360	ENSFCAG00000012498	SYNJ1	98	87.285	Felis_catus
ENSJJAG00000020168	Synj1	81	70.438	ENSFALG00000004680	SYNJ1	100	69.102	Ficedula_albicollis
ENSJJAG00000020168	Synj1	82	88.966	ENSFDAG00000016818	SYNJ1	98	89.002	Fukomys_damarensis
ENSJJAG00000020168	Synj1	84	59.859	ENSFHEG00000017689	synj1	97	57.079	Fundulus_heteroclitus
ENSJJAG00000020168	Synj1	62	66.534	ENSGMOG00000014852	synj1	77	66.340	Gadus_morhua
ENSJJAG00000020168	Synj1	100	72.083	ENSGALG00000034317	SYNJ1	100	70.238	Gallus_gallus
ENSJJAG00000020168	Synj1	68	69.644	ENSGAFG00000019466	synj1	96	60.410	Gambusia_affinis
ENSJJAG00000020168	Synj1	82	58.115	ENSGACG00000020575	synj1	92	59.397	Gasterosteus_aculeatus
ENSJJAG00000020168	Synj1	100	73.424	ENSGAGG00000022523	SYNJ1	98	79.016	Gopherus_agassizii
ENSJJAG00000020168	Synj1	100	85.407	ENSGGOG00000015945	SYNJ1	98	87.676	Gorilla_gorilla
ENSJJAG00000020168	Synj1	81	65.298	ENSHBUG00000007774	synj1	98	62.676	Haplochromis_burtoni
ENSJJAG00000020168	Synj1	100	85.914	ENSHGLG00000006420	SYNJ1	98	88.768	Heterocephalus_glaber_female
ENSJJAG00000020168	Synj1	100	85.914	ENSHGLG00100012591	SYNJ1	100	86.580	Heterocephalus_glaber_male
ENSJJAG00000020168	Synj1	82	59.740	ENSHCOG00000012774	synj1	94	60.812	Hippocampus_comes
ENSJJAG00000020168	Synj1	95	60.183	ENSIPUG00000010691	SYNJ1	95	59.574	Ictalurus_punctatus
ENSJJAG00000020168	Synj1	100	87.080	ENSSTOG00000015806	SYNJ1	99	90.392	Ictidomys_tridecemlineatus
ENSJJAG00000020168	Synj1	69	70.191	ENSKMAG00000004221	synj1	87	71.316	Kryptolebias_marmoratus
ENSJJAG00000020168	Synj1	89	61.654	ENSLBEG00000015081	synj1	95	61.195	Labrus_bergylta
ENSJJAG00000020168	Synj1	100	63.965	ENSLACG00000005928	SYNJ1	96	65.677	Latimeria_chalumnae
ENSJJAG00000020168	Synj1	95	66.645	ENSLOCG00000009230	synj1	100	65.580	Lepisosteus_oculatus
ENSJJAG00000020168	Synj1	100	82.754	ENSLAFG00000011806	SYNJ1	100	86.084	Loxodonta_africana
ENSJJAG00000020168	Synj1	98	84.482	ENSMFAG00000018883	SYNJ1	97	88.647	Macaca_fascicularis
ENSJJAG00000020168	Synj1	100	85.534	ENSMMUG00000004624	SYNJ1	98	88.872	Macaca_mulatta
ENSJJAG00000020168	Synj1	100	85.660	ENSMNEG00000040077	SYNJ1	98	85.904	Macaca_nemestrina
ENSJJAG00000020168	Synj1	100	85.534	ENSMLEG00000037029	SYNJ1	98	88.066	Mandrillus_leucophaeus
ENSJJAG00000020168	Synj1	85	61.588	ENSMAMG00000013404	synj1	89	58.263	Mastacembelus_armatus
ENSJJAG00000020168	Synj1	69	70.310	ENSMZEG00005024358	synj1	98	62.482	Maylandia_zebra
ENSJJAG00000020168	Synj1	100	72.938	ENSMGAG00000014522	SYNJ1	100	72.517	Meleagris_gallopavo
ENSJJAG00000020168	Synj1	82	88.388	ENSMAUG00000009743	Synj1	99	88.388	Mesocricetus_auratus
ENSJJAG00000020168	Synj1	100	84.965	ENSMICG00000034953	SYNJ1	98	87.910	Microcebus_murinus
ENSJJAG00000020168	Synj1	71	67.845	ENSMMOG00000010203	synj1	97	62.963	Mola_mola
ENSJJAG00000020168	Synj1	82	74.981	ENSMODG00000021073	SYNJ1	98	74.593	Monodelphis_domestica
ENSJJAG00000020168	Synj1	85	63.570	ENSMALG00000014015	synj1	88	58.921	Monopterus_albus
ENSJJAG00000020168	Synj1	100	85.136	MGP_CAROLIEiJ_G0020951	Synj1	99	88.931	Mus_caroli
ENSJJAG00000020168	Synj1	100	85.262	ENSMUSG00000022973	Synj1	99	88.855	Mus_musculus
ENSJJAG00000020168	Synj1	100	85.136	MGP_PahariEiJ_G0016656	Synj1	99	89.084	Mus_pahari
ENSJJAG00000020168	Synj1	100	85.262	MGP_SPRETEiJ_G0021857	Synj1	99	88.855	Mus_spretus
ENSJJAG00000020168	Synj1	100	84.330	ENSMPUG00000001153	SYNJ1	100	84.330	Mustela_putorius_furo
ENSJJAG00000020168	Synj1	67	75.169	ENSMLUG00000005764	-	99	74.235	Myotis_lucifugus
ENSJJAG00000020168	Synj1	82	89.840	ENSNGAG00000000453	Synj1	98	89.813	Nannospalax_galili
ENSJJAG00000020168	Synj1	69	67.183	ENSNBRG00000011936	synj1	95	56.474	Neolamprologus_brichardi
ENSJJAG00000020168	Synj1	93	85.703	ENSNLEG00000003734	SYNJ1	100	85.345	Nomascus_leucogenys
ENSJJAG00000020168	Synj1	72	90.244	ENSMEUG00000004158	-	66	90.244	Notamacropus_eugenii
ENSJJAG00000020168	Synj1	93	83.293	ENSOPRG00000013602	SYNJ1	93	83.293	Ochotona_princeps
ENSJJAG00000020168	Synj1	90	62.726	ENSONIG00000004667	synj1	100	63.257	Oreochromis_niloticus
ENSJJAG00000020168	Synj1	97	71.310	ENSOANG00000006929	SYNJ1	100	71.246	Ornithorhynchus_anatinus
ENSJJAG00000020168	Synj1	100	81.841	ENSOCUG00000001420	SYNJ1	100	81.922	Oryctolagus_cuniculus
ENSJJAG00000020168	Synj1	86	69.909	ENSORLG00000004320	synj1	96	62.707	Oryzias_latipes
ENSJJAG00000020168	Synj1	68	68.273	ENSORLG00020011994	synj1	96	63.154	Oryzias_latipes_hni
ENSJJAG00000020168	Synj1	86	70.513	ENSORLG00015018077	synj1	93	57.654	Oryzias_latipes_hsok
ENSJJAG00000020168	Synj1	68	70.604	ENSOMEG00000014322	synj1	97	63.457	Oryzias_melastigma
ENSJJAG00000020168	Synj1	100	82.212	ENSOGAG00000006010	SYNJ1	98	82.516	Otolemur_garnettii
ENSJJAG00000020168	Synj1	100	82.390	ENSOARG00000013414	SYNJ1	97	82.704	Ovis_aries
ENSJJAG00000020168	Synj1	100	85.786	ENSPPAG00000026784	SYNJ1	98	88.144	Pan_paniscus
ENSJJAG00000020168	Synj1	100	84.513	ENSPPRG00000023469	SYNJ1	98	87.441	Panthera_pardus
ENSJJAG00000020168	Synj1	100	84.576	ENSPTIG00000007930	SYNJ1	98	87.363	Panthera_tigris_altaica
ENSJJAG00000020168	Synj1	100	85.850	ENSPTRG00000023787	SYNJ1	98	88.144	Pan_troglodytes
ENSJJAG00000020168	Synj1	100	83.260	ENSPTRG00000048135	-	98	85.290	Pan_troglodytes
ENSJJAG00000020168	Synj1	100	85.534	ENSPANG00000022531	SYNJ1	98	89.158	Papio_anubis
ENSJJAG00000020168	Synj1	73	71.886	ENSPKIG00000022603	synj1	95	70.284	Paramormyrops_kingsleyae
ENSJJAG00000020168	Synj1	68	71.024	ENSPMGG00000016831	synj1	93	71.642	Periophthalmus_magnuspinnatus
ENSJJAG00000020168	Synj1	82	89.076	ENSPEMG00000018767	Synj1	99	89.076	Peromyscus_maniculatus_bairdii
ENSJJAG00000020168	Synj1	64	57.774	ENSPMAG00000002887	synj1	96	50.531	Petromyzon_marinus
ENSJJAG00000020168	Synj1	100	75.156	ENSPCIG00000016372	SYNJ1	98	81.542	Phascolarctos_cinereus
ENSJJAG00000020168	Synj1	68	70.118	ENSPFOG00000016886	synj1	97	64.361	Poecilia_formosa
ENSJJAG00000020168	Synj1	82	59.696	ENSPLAG00000017559	synj1	97	60.054	Poecilia_latipinna
ENSJJAG00000020168	Synj1	84	60.299	ENSPMEG00000007643	synj1	89	60.175	Poecilia_mexicana
ENSJJAG00000020168	Synj1	83	61.459	ENSPREG00000012412	synj1	98	61.880	Poecilia_reticulata
ENSJJAG00000020168	Synj1	84	87.836	ENSPPYG00000011365	SYNJ1	96	88.060	Pongo_abelii
ENSJJAG00000020168	Synj1	92	92.857	ENSPCAG00000009906	SYNJ1	84	92.857	Procavia_capensis
ENSJJAG00000020168	Synj1	100	73.701	ENSPCOG00000024841	SYNJ1	100	75.955	Propithecus_coquereli
ENSJJAG00000020168	Synj1	100	80.468	ENSPVAG00000000892	SYNJ1	100	80.468	Pteropus_vampyrus
ENSJJAG00000020168	Synj1	69	69.315	ENSPNYG00000022989	synj1	97	62.285	Pundamilia_nyererei
ENSJJAG00000020168	Synj1	68	72.114	ENSPNAG00000021119	synj1	89	72.311	Pygocentrus_nattereri
ENSJJAG00000020168	Synj1	100	84.839	ENSRNOG00000002051	Synj1	98	88.518	Rattus_norvegicus
ENSJJAG00000020168	Synj1	100	85.471	ENSRBIG00000034477	SYNJ1	98	87.988	Rhinopithecus_bieti
ENSJJAG00000020168	Synj1	100	85.534	ENSRROG00000039256	SYNJ1	98	88.066	Rhinopithecus_roxellana
ENSJJAG00000020168	Synj1	100	86.095	ENSSBOG00000021001	SYNJ1	100	86.222	Saimiri_boliviensis_boliviensis
ENSJJAG00000020168	Synj1	99	72.260	ENSSHAG00000008538	SYNJ1	99	71.788	Sarcophilus_harrisii
ENSJJAG00000020168	Synj1	96	61.702	ENSSFOG00015006095	synj1	95	58.734	Scleropages_formosus
ENSJJAG00000020168	Synj1	82	61.319	ENSSMAG00000018066	synj1	95	61.618	Scophthalmus_maximus
ENSJJAG00000020168	Synj1	69	70.641	ENSSDUG00000013058	synj1	88	58.788	Seriola_dumerili
ENSJJAG00000020168	Synj1	82	63.636	ENSSLDG00000021406	synj1	96	63.150	Seriola_lalandi_dorsalis
ENSJJAG00000020168	Synj1	67	94.808	ENSSARG00000009490	SYNJ1	69	94.808	Sorex_araneus
ENSJJAG00000020168	Synj1	99	69.592	ENSSPUG00000012552	SYNJ1	94	72.200	Sphenodon_punctatus
ENSJJAG00000020168	Synj1	61	75.000	ENSSPAG00000006812	SYNJ1	82	63.511	Stegastes_partitus
ENSJJAG00000020168	Synj1	85	70.438	ENSSPAG00000017029	synj1	97	61.224	Stegastes_partitus
ENSJJAG00000020168	Synj1	100	77.729	ENSSSCG00000012035	SYNJ1	98	87.132	Sus_scrofa
ENSJJAG00000020168	Synj1	100	71.973	ENSTGUG00000013445	SYNJ1	100	70.867	Taeniopygia_guttata
ENSJJAG00000020168	Synj1	71	67.867	ENSTRUG00000006907	synj1	94	62.886	Takifugu_rubripes
ENSJJAG00000020168	Synj1	89	61.272	ENSTNIG00000009940	synj1	100	61.260	Tetraodon_nigroviridis
ENSJJAG00000020168	Synj1	92	79.051	ENSTBEG00000016298	SYNJ1	92	79.051	Tupaia_belangeri
ENSJJAG00000020168	Synj1	100	76.043	ENSTTRG00000002222	SYNJ1	100	75.727	Tursiops_truncatus
ENSJJAG00000020168	Synj1	100	82.700	ENSUAMG00000018606	SYNJ1	99	88.021	Ursus_americanus
ENSJJAG00000020168	Synj1	95	89.172	ENSUMAG00000018419	SYNJ1	99	92.039	Ursus_maritimus
ENSJJAG00000020168	Synj1	89	98.571	ENSVPAG00000001241	SYNJ1	87	98.571	Vicugna_pacos
ENSJJAG00000020168	Synj1	100	84.981	ENSVVUG00000023125	SYNJ1	98	89.158	Vulpes_vulpes
ENSJJAG00000020168	Synj1	100	65.742	ENSXETG00000009899	synj1	95	66.039	Xenopus_tropicalis
ENSJJAG00000020168	Synj1	68	70.182	ENSXCOG00000011896	synj1	97	63.936	Xiphophorus_couchianus
ENSJJAG00000020168	Synj1	84	59.603	ENSXMAG00000017524	synj1	97	62.885	Xiphophorus_maculatus