EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000020480 (Gene tree)
Gene ID: 101610772
Gene Symbol: Scaf8
Alias: A630086M08Rik|A930036P18Rik|Rbm16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 64845 bases
Position: chrJH725440.1:12006438-12071282
Accession: 101610772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000019588	RRM_1	PF00076.22	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000026124	-	3795	XM_012951151	ENSJJAP00000019588	1264 (aa)	XP_012806605	-

Gene Model

Click here to download ENSJJAG00000020480's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000020480's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000020480	Scaf8	100	92.925	ENSG00000213079	SCAF8	100	92.925	Homo_sapiens
ENSJJAG00000020480	Scaf8	86	68.894	ENSAPOG00000015527	SCAF8	76	68.408	Acanthochromis_polyacanthus
ENSJJAG00000020480	Scaf8	99	92.704	ENSAMEG00000007583	SCAF8	95	92.704	Ailuropoda_melanoleuca
ENSJJAG00000020480	Scaf8	86	68.894	ENSAOCG00000002421	SCAF8	75	68.408	Amphiprion_ocellaris
ENSJJAG00000020480	Scaf8	87	65.937	ENSATEG00000006959	SCAF8	96	65.652	Anabas_testudineus
ENSJJAG00000020480	Scaf8	99	77.440	ENSAPLG00000005765	SCAF8	99	77.283	Anas_platyrhynchos
ENSJJAG00000020480	Scaf8	99	72.956	ENSACAG00000005282	SCAF8	99	72.841	Anolis_carolinensis
ENSJJAG00000020480	Scaf8	100	92.767	ENSANAG00000036184	SCAF8	100	92.767	Aotus_nancymaae
ENSJJAG00000020480	Scaf8	86	69.175	ENSACLG00000018828	SCAF8	78	68.568	Astatotilapia_calliptera
ENSJJAG00000020480	Scaf8	100	91.654	ENSBTAG00000031917	SCAF8	100	91.654	Bos_taurus
ENSJJAG00000020480	Scaf8	100	92.296	ENSCJAG00000012631	SCAF8	94	92.789	Callithrix_jacchus
ENSJJAG00000020480	Scaf8	99	92.948	ENSCAFG00000000570	SCAF8	99	92.948	Canis_familiaris
ENSJJAG00000020480	Scaf8	99	92.948	ENSCAFG00020015048	SCAF8	99	92.587	Canis_lupus_dingo
ENSJJAG00000020480	Scaf8	100	91.496	ENSCHIG00000025041	SCAF8	100	91.779	Capra_hircus
ENSJJAG00000020480	Scaf8	99	93.185	ENSTSYG00000010991	SCAF8	97	93.185	Carlito_syrichta
ENSJJAG00000020480	Scaf8	65	97.414	ENSCAPG00000003300	SCAF8	87	97.368	Cavia_aperea
ENSJJAG00000020480	Scaf8	99	84.834	ENSCPOG00000022216	-	99	84.111	Cavia_porcellus
ENSJJAG00000020480	Scaf8	100	92.453	ENSCCAG00000024952	SCAF8	100	92.453	Cebus_capucinus
ENSJJAG00000020480	Scaf8	100	92.925	ENSCATG00000035361	SCAF8	100	92.925	Cercocebus_atys
ENSJJAG00000020480	Scaf8	99	93.175	ENSCLAG00000004910	SCAF8	100	93.175	Chinchilla_lanigera
ENSJJAG00000020480	Scaf8	99	93.423	ENSCSAG00000013430	SCAF8	98	93.423	Chlorocebus_sabaeus
ENSJJAG00000020480	Scaf8	99	73.871	ENSCPBG00000016330	SCAF8	99	79.935	Chrysemys_picta_bellii
ENSJJAG00000020480	Scaf8	100	92.846	ENSCANG00000039499	SCAF8	99	93.344	Colobus_angolensis_palliatus
ENSJJAG00000020480	Scaf8	100	91.654	ENSCGRG00001020167	Scaf8	100	91.654	Cricetulus_griseus_chok1gshd
ENSJJAG00000020480	Scaf8	99	92.143	ENSCGRG00000004120	Scaf8	99	91.924	Cricetulus_griseus_crigri
ENSJJAG00000020480	Scaf8	86	66.585	ENSCSEG00000000043	-	75	68.049	Cynoglossus_semilaevis
ENSJJAG00000020480	Scaf8	82	66.710	ENSCVAG00000000925	SCAF8	76	66.057	Cyprinodon_variegatus
ENSJJAG00000020480	Scaf8	96	86.628	ENSDNOG00000025271	SCAF8	100	90.238	Dasypus_novemcinctus
ENSJJAG00000020480	Scaf8	99	91.943	ENSDORG00000006391	Scaf8	99	92.101	Dipodomys_ordii
ENSJJAG00000020480	Scaf8	100	92.531	ENSEASG00005018879	SCAF8	100	92.531	Equus_asinus_asinus
ENSJJAG00000020480	Scaf8	100	92.683	ENSECAG00000005540	SCAF8	100	92.683	Equus_caballus
ENSJJAG00000020480	Scaf8	85	67.528	ENSELUG00000002779	SCAF8	74	66.913	Esox_lucius
ENSJJAG00000020480	Scaf8	100	92.604	ENSFCAG00000023424	SCAF8	100	92.604	Felis_catus
ENSJJAG00000020480	Scaf8	99	77.020	ENSFALG00000012433	SCAF8	99	77.194	Ficedula_albicollis
ENSJJAG00000020480	Scaf8	99	92.948	ENSFDAG00000010335	SCAF8	99	92.948	Fukomys_damarensis
ENSJJAG00000020480	Scaf8	90	68.414	ENSFHEG00000008284	SCAF8	76	70.526	Fundulus_heteroclitus
ENSJJAG00000020480	Scaf8	80	57.411	ENSGMOG00000018812	SCAF8	82	58.638	Gadus_morhua
ENSJJAG00000020480	Scaf8	99	77.596	ENSGALG00000013635	SCAF8	98	77.205	Gallus_gallus
ENSJJAG00000020480	Scaf8	50	59.259	ENSGAFG00000018033	SCAF8	77	64.969	Gambusia_affinis
ENSJJAG00000020480	Scaf8	92	53.560	ENSGACG00000006909	SCAF8	92	69.934	Gasterosteus_aculeatus
ENSJJAG00000020480	Scaf8	63	69.951	ENSGAGG00000017820	-	88	69.951	Gopherus_agassizii
ENSJJAG00000020480	Scaf8	100	92.925	ENSGGOG00000008645	SCAF8	100	92.925	Gorilla_gorilla
ENSJJAG00000020480	Scaf8	86	69.053	ENSHBUG00000019537	SCAF8	78	68.447	Haplochromis_burtoni
ENSJJAG00000020480	Scaf8	100	91.745	ENSHGLG00000003619	SCAF8	100	91.745	Heterocephalus_glaber_female
ENSJJAG00000020480	Scaf8	100	91.654	ENSHGLG00100004708	SCAF8	100	92.235	Heterocephalus_glaber_male
ENSJJAG00000020480	Scaf8	99	93.978	ENSSTOG00000026043	SCAF8	99	93.978	Ictidomys_tridecemlineatus
ENSJJAG00000020480	Scaf8	86	68.537	ENSKMAG00000012767	SCAF8	77	68.049	Kryptolebias_marmoratus
ENSJJAG00000020480	Scaf8	67	76.296	ENSLBEG00000012484	-	63	75.887	Labrus_bergylta
ENSJJAG00000020480	Scaf8	82	79.790	ENSLACG00000001394	SCAF8	93	77.953	Latimeria_chalumnae
ENSJJAG00000020480	Scaf8	99	60.549	ENSLOCG00000016856	SCAF8	99	59.686	Lepisosteus_oculatus
ENSJJAG00000020480	Scaf8	100	90.188	ENSLAFG00000000022	SCAF8	100	90.738	Loxodonta_africana
ENSJJAG00000020480	Scaf8	100	92.925	ENSMFAG00000032738	SCAF8	100	92.925	Macaca_fascicularis
ENSJJAG00000020480	Scaf8	100	92.925	ENSMMUG00000015163	SCAF8	100	92.925	Macaca_mulatta
ENSJJAG00000020480	Scaf8	100	92.925	ENSMNEG00000043466	SCAF8	100	92.925	Macaca_nemestrina
ENSJJAG00000020480	Scaf8	99	93.582	ENSMLEG00000034845	SCAF8	99	93.582	Mandrillus_leucophaeus
ENSJJAG00000020480	Scaf8	83	66.199	ENSMAMG00000009457	SCAF8	76	65.306	Mastacembelus_armatus
ENSJJAG00000020480	Scaf8	86	69.053	ENSMZEG00005005698	SCAF8	78	68.447	Maylandia_zebra
ENSJJAG00000020480	Scaf8	99	76.366	ENSMGAG00000012762	SCAF8	100	76.923	Meleagris_gallopavo
ENSJJAG00000020480	Scaf8	99	91.429	ENSMAUG00000009513	Scaf8	100	91.429	Mesocricetus_auratus
ENSJJAG00000020480	Scaf8	100	92.380	ENSMICG00000028965	SCAF8	100	92.302	Microcebus_murinus
ENSJJAG00000020480	Scaf8	100	91.969	ENSMOCG00000014950	Scaf8	100	91.969	Microtus_ochrogaster
ENSJJAG00000020480	Scaf8	85	64.030	ENSMMOG00000002216	SCAF8	77	63.041	Mola_mola
ENSJJAG00000020480	Scaf8	99	84.719	ENSMODG00000008301	SCAF8	99	84.244	Monodelphis_domestica
ENSJJAG00000020480	Scaf8	51	58.760	ENSMALG00000011584	SCAF8	77	67.715	Monopterus_albus
ENSJJAG00000020480	Scaf8	100	91.024	MGP_CAROLIEiJ_G0021016	Scaf8	100	91.024	Mus_caroli
ENSJJAG00000020480	Scaf8	100	91.102	ENSMUSG00000046201	Scaf8	100	91.102	Mus_musculus
ENSJJAG00000020480	Scaf8	100	91.811	MGP_PahariEiJ_G0023334	Scaf8	100	91.811	Mus_pahari
ENSJJAG00000020480	Scaf8	99	92.625	ENSMPUG00000001974	SCAF8	98	92.625	Mustela_putorius_furo
ENSJJAG00000020480	Scaf8	99	91.673	ENSMLUG00000029190	SCAF8	99	91.673	Myotis_lucifugus
ENSJJAG00000020480	Scaf8	100	92.598	ENSNGAG00000012332	Scaf8	100	92.598	Nannospalax_galili
ENSJJAG00000020480	Scaf8	89	69.282	ENSNBRG00000009067	SCAF8	94	68.750	Neolamprologus_brichardi
ENSJJAG00000020480	Scaf8	100	91.608	ENSNLEG00000015509	SCAF8	99	91.805	Nomascus_leucogenys
ENSJJAG00000020480	Scaf8	70	93.750	ENSOPRG00000018413	-	77	94.059	Ochotona_princeps
ENSJJAG00000020480	Scaf8	100	92.302	ENSODEG00000007296	SCAF8	100	92.302	Octodon_degus
ENSJJAG00000020480	Scaf8	99	54.864	ENSONIG00000008119	SCAF8	99	54.241	Oreochromis_niloticus
ENSJJAG00000020480	Scaf8	99	94.136	ENSOCUG00000026063	SCAF8	99	94.136	Oryctolagus_cuniculus
ENSJJAG00000020480	Scaf8	92	55.760	ENSORLG00000017358	SCAF8	77	68.193	Oryzias_latipes
ENSJJAG00000020480	Scaf8	92	55.927	ENSORLG00020002214	SCAF8	77	68.317	Oryzias_latipes_hni
ENSJJAG00000020480	Scaf8	92	55.917	ENSORLG00015015779	SCAF8	77	68.642	Oryzias_latipes_hsok
ENSJJAG00000020480	Scaf8	92	55.853	ENSOMEG00000015471	SCAF8	76	68.519	Oryzias_melastigma
ENSJJAG00000020480	Scaf8	99	92.710	ENSOGAG00000034223	SCAF8	94	92.710	Otolemur_garnettii
ENSJJAG00000020480	Scaf8	99	91.905	ENSOARG00000004159	SCAF8	99	91.905	Ovis_aries
ENSJJAG00000020480	Scaf8	100	92.846	ENSPPAG00000039826	SCAF8	100	92.846	Pan_paniscus
ENSJJAG00000020480	Scaf8	100	92.683	ENSPPRG00000023175	SCAF8	100	92.683	Panthera_pardus
ENSJJAG00000020480	Scaf8	99	93.106	ENSPTIG00000014836	SCAF8	99	93.106	Panthera_tigris_altaica
ENSJJAG00000020480	Scaf8	100	92.925	ENSPTRG00000018727	SCAF8	100	92.925	Pan_troglodytes
ENSJJAG00000020480	Scaf8	100	92.925	ENSPANG00000017489	SCAF8	99	92.003	Papio_anubis
ENSJJAG00000020480	Scaf8	91	60.465	ENSPKIG00000021212	SCAF8	99	56.611	Paramormyrops_kingsleyae
ENSJJAG00000020480	Scaf8	89	73.162	ENSPSIG00000008614	SCAF8	95	76.081	Pelodiscus_sinensis
ENSJJAG00000020480	Scaf8	99	92.302	ENSPEMG00000010531	Scaf8	100	92.302	Peromyscus_maniculatus_bairdii
ENSJJAG00000020480	Scaf8	100	84.760	ENSPCIG00000001141	SCAF8	100	84.760	Phascolarctos_cinereus
ENSJJAG00000020480	Scaf8	50	59.091	ENSPFOG00000004176	SCAF8	99	54.469	Poecilia_formosa
ENSJJAG00000020480	Scaf8	85	68.867	ENSPLAG00000021432	SCAF8	77	68.244	Poecilia_latipinna
ENSJJAG00000020480	Scaf8	50	59.375	ENSPMEG00000007591	SCAF8	84	68.082	Poecilia_mexicana
ENSJJAG00000020480	Scaf8	85	68.742	ENSPREG00000000652	SCAF8	77	68.120	Poecilia_reticulata
ENSJJAG00000020480	Scaf8	100	91.523	ENSPPYG00000017121	SCAF8	100	91.209	Pongo_abelii
ENSJJAG00000020480	Scaf8	85	95.812	ENSPCAG00000013044	SCAF8	90	95.812	Procavia_capensis
ENSJJAG00000020480	Scaf8	100	93.009	ENSPCOG00000002067	SCAF8	99	93.360	Propithecus_coquereli
ENSJJAG00000020480	Scaf8	98	89.448	ENSPVAG00000005582	SCAF8	100	89.448	Pteropus_vampyrus
ENSJJAG00000020480	Scaf8	86	69.175	ENSPNYG00000007277	SCAF8	78	68.568	Pundamilia_nyererei
ENSJJAG00000020480	Scaf8	86	68.015	ENSPNAG00000024740	SCAF8	81	68.260	Pygocentrus_nattereri
ENSJJAG00000020480	Scaf8	100	91.102	ENSRNOG00000016919	Scaf8	100	91.102	Rattus_norvegicus
ENSJJAG00000020480	Scaf8	100	92.846	ENSRBIG00000035769	SCAF8	100	92.846	Rhinopithecus_bieti
ENSJJAG00000020480	Scaf8	100	92.767	ENSRROG00000013580	SCAF8	100	92.767	Rhinopithecus_roxellana
ENSJJAG00000020480	Scaf8	100	92.531	ENSSBOG00000027023	SCAF8	100	92.531	Saimiri_boliviensis_boliviensis
ENSJJAG00000020480	Scaf8	100	83.987	ENSSHAG00000009915	SCAF8	100	83.987	Sarcophilus_harrisii
ENSJJAG00000020480	Scaf8	99	54.147	ENSSFOG00015009481	SCAF8	86	69.189	Scleropages_formosus
ENSJJAG00000020480	Scaf8	86	68.370	ENSSMAG00000008275	SCAF8	76	67.762	Scophthalmus_maximus
ENSJJAG00000020480	Scaf8	100	75.716	ENSSPUG00000015219	SCAF8	100	75.641	Sphenodon_punctatus
ENSJJAG00000020480	Scaf8	100	92.290	ENSSSCG00000004070	SCAF8	100	92.697	Sus_scrofa
ENSJJAG00000020480	Scaf8	99	77.909	ENSTGUG00000011151	SCAF8	99	78.066	Taeniopygia_guttata
ENSJJAG00000020480	Scaf8	84	67.284	ENSTRUG00000009243	SCAF8	76	67.037	Takifugu_rubripes
ENSJJAG00000020480	Scaf8	91	65.403	ENSTNIG00000016885	SCAF8	99	65.732	Tetraodon_nigroviridis
ENSJJAG00000020480	Scaf8	99	91.990	ENSTTRG00000014538	SCAF8	100	91.990	Tursiops_truncatus
ENSJJAG00000020480	Scaf8	100	91.975	ENSUAMG00000024736	SCAF8	99	92.399	Ursus_americanus
ENSJJAG00000020480	Scaf8	98	92.456	ENSUMAG00000013404	SCAF8	100	92.456	Ursus_maritimus
ENSJJAG00000020480	Scaf8	68	85.465	ENSVPAG00000012465	SCAF8	99	82.759	Vicugna_pacos
ENSJJAG00000020480	Scaf8	100	92.435	ENSVVUG00000007532	SCAF8	100	92.937	Vulpes_vulpes
ENSJJAG00000020480	Scaf8	99	60.938	ENSXETG00000013132	scaf8	99	60.846	Xenopus_tropicalis
ENSJJAG00000020480	Scaf8	85	68.742	ENSXMAG00000019192	SCAF8	77	68.244	Xiphophorus_maculatus