EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000020549 (Gene tree)
Gene ID: 101608298
Gene Symbol: -
Alias: -
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 22257 bases
Position: chrJH725454.1:5407583-5429839
Accession: 101608298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000019645	SLBP_RNA_bind	PF15247.6	4e-29	1	1
ENSJJAP00000019653	SLBP_RNA_bind	PF15247.6	4.6e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000026182	-	998	XM_012948224	ENSJJAP00000019645	255 (aa)	XP_012803678	UPI00064CDCBE
ENSJJAT00000026190	-	828	XM_004656038	ENSJJAP00000019653	275 (aa)	XP_004656095	UPI000333410A

Gene Model

Click here to download ENSJJAG00000020549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000020549's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000020549	-	100	97.818	ENSJJAG00000002394	-	100	97.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000020549	-	100	86.545	ENSG00000163950	SLBP	100	85.818	Homo_sapiens
ENSJJAG00000020549	-	85	49.425	ENSAPOG00000004953	slbp	90	50.195	Acanthochromis_polyacanthus
ENSJJAG00000020549	-	79	93.548	ENSAMEG00000016915	SLBP	100	93.548	Ailuropoda_melanoleuca
ENSJJAG00000020549	-	69	59.113	ENSACIG00000022308	slbp	76	57.286	Amphilophus_citrinellus
ENSJJAG00000020549	-	90	50.000	ENSAOCG00000024545	slbp	88	50.190	Amphiprion_ocellaris
ENSJJAG00000020549	-	85	50.958	ENSAPEG00000017629	slbp	88	50.190	Amphiprion_percula
ENSJJAG00000020549	-	85	51.145	ENSATEG00000016358	slbp	74	58.294	Anabas_testudineus
ENSJJAG00000020549	-	79	78.636	ENSAPLG00000015989	-	100	78.182	Anas_platyrhynchos
ENSJJAG00000020549	-	100	83.688	ENSANAG00000034769	SLBP	100	82.979	Aotus_nancymaae
ENSJJAG00000020549	-	82	51.793	ENSACLG00000007036	-	78	52.074	Astatotilapia_calliptera
ENSJJAG00000020549	-	83	56.148	ENSAMXG00000014527	slbp	76	63.592	Astyanax_mexicanus
ENSJJAG00000020549	-	100	86.545	ENSBTAG00000001328	SLBP	100	86.545	Bos_taurus
ENSJJAG00000020549	-	100	81.915	ENSCJAG00000001790	SLBP	100	81.915	Callithrix_jacchus
ENSJJAG00000020549	-	100	86.545	ENSCAFG00000015016	SLBP	100	86.545	Canis_familiaris
ENSJJAG00000020549	-	100	86.545	ENSCAFG00020012334	SLBP	100	86.545	Canis_lupus_dingo
ENSJJAG00000020549	-	100	85.818	ENSCHIG00000019364	SLBP	100	85.818	Capra_hircus
ENSJJAG00000020549	-	100	89.455	ENSTSYG00000000376	SLBP	100	88.364	Carlito_syrichta
ENSJJAG00000020549	-	66	90.608	ENSCAPG00000016340	SLBP	100	90.608	Cavia_aperea
ENSJJAG00000020549	-	100	84.588	ENSCPOG00000000031	SLBP	100	84.588	Cavia_porcellus
ENSJJAG00000020549	-	67	82.857	ENSCCAG00000026134	SLBP	87	80.952	Cebus_capucinus
ENSJJAG00000020549	-	100	87.273	ENSCATG00000029173	SLBP	100	86.545	Cercocebus_atys
ENSJJAG00000020549	-	100	85.818	ENSCLAG00000008157	SLBP	100	85.818	Chinchilla_lanigera
ENSJJAG00000020549	-	100	72.857	ENSCSAG00000015628	SLBP	100	72.857	Chlorocebus_sabaeus
ENSJJAG00000020549	-	100	69.504	ENSCPBG00000000746	SLBP	100	71.631	Chrysemys_picta_bellii
ENSJJAG00000020549	-	79	89.815	ENSCANG00000041008	SLBP	100	88.889	Colobus_angolensis_palliatus
ENSJJAG00000020549	-	100	89.091	ENSCGRG00001012991	-	100	89.091	Cricetulus_griseus_chok1gshd
ENSJJAG00000020549	-	100	92.000	ENSCGRG00001009760	-	100	92.000	Cricetulus_griseus_chok1gshd
ENSJJAG00000020549	-	100	92.000	ENSCGRG00000004506	Slbp	100	92.000	Cricetulus_griseus_crigri
ENSJJAG00000020549	-	83	52.988	ENSCSEG00000020337	-	76	58.768	Cynoglossus_semilaevis
ENSJJAG00000020549	-	83	49.200	ENSCVAG00000019592	-	86	47.699	Cyprinodon_variegatus
ENSJJAG00000020549	-	83	57.202	ENSDARG00000100558	slbp	66	63.000	Danio_rerio
ENSJJAG00000020549	-	100	77.739	ENSDNOG00000047539	SLBP	100	77.739	Dasypus_novemcinctus
ENSJJAG00000020549	-	79	92.130	ENSDORG00000003028	Slbp	100	92.347	Dipodomys_ordii
ENSJJAG00000020549	-	86	78.661	ENSETEG00000004641	SLBP	99	78.661	Echinops_telfairi
ENSJJAG00000020549	-	70	91.667	ENSEASG00005022714	SLBP	100	91.667	Equus_asinus_asinus
ENSJJAG00000020549	-	85	81.545	ENSECAG00000011689	SLBP	69	88.571	Equus_caballus
ENSJJAG00000020549	-	93	49.462	ENSELUG00000012854	slbp	99	49.458	Esox_lucius
ENSJJAG00000020549	-	100	88.364	ENSFCAG00000000169	SLBP	100	88.364	Felis_catus
ENSJJAG00000020549	-	100	69.395	ENSFALG00000010003	-	100	69.039	Ficedula_albicollis
ENSJJAG00000020549	-	92	90.551	ENSFDAG00000007592	SLBP	99	90.551	Fukomys_damarensis
ENSJJAG00000020549	-	82	50.607	ENSFHEG00000007497	slbp	77	51.923	Fundulus_heteroclitus
ENSJJAG00000020549	-	53	71.053	ENSGMOG00000015352	slbp	97	71.053	Gadus_morhua
ENSJJAG00000020549	-	100	68.327	ENSGALG00000015712	SLBP	100	70.463	Gallus_gallus
ENSJJAG00000020549	-	82	53.036	ENSGAFG00000019577	slbp	89	47.826	Gambusia_affinis
ENSJJAG00000020549	-	86	50.000	ENSGACG00000019596	slbp	82	56.098	Gasterosteus_aculeatus
ENSJJAG00000020549	-	86	68.033	ENSGAGG00000012096	SLBP	91	71.806	Gopherus_agassizii
ENSJJAG00000020549	-	100	86.545	ENSGGOG00000003167	SLBP	100	85.818	Gorilla_gorilla
ENSJJAG00000020549	-	82	51.575	ENSHBUG00000003338	-	78	52.074	Haplochromis_burtoni
ENSJJAG00000020549	-	89	85.965	ENSHGLG00000008313	-	100	81.569	Heterocephalus_glaber_female
ENSJJAG00000020549	-	84	85.388	ENSHGLG00000010461	-	98	82.716	Heterocephalus_glaber_female
ENSJJAG00000020549	-	100	77.091	ENSHGLG00000005955	-	100	77.091	Heterocephalus_glaber_female
ENSJJAG00000020549	-	84	85.388	ENSHGLG00100014906	-	98	82.716	Heterocephalus_glaber_male
ENSJJAG00000020549	-	89	86.842	ENSHGLG00100010510	-	100	82.353	Heterocephalus_glaber_male
ENSJJAG00000020549	-	100	88.000	ENSHGLG00100014018	-	100	88.000	Heterocephalus_glaber_male
ENSJJAG00000020549	-	92	43.431	ENSHCOG00000013425	slbp	99	47.601	Hippocampus_comes
ENSJJAG00000020549	-	70	65.657	ENSIPUG00000016780	slbp	74	66.162	Ictalurus_punctatus
ENSJJAG00000020549	-	100	90.182	ENSSTOG00000003262	SLBP	100	90.182	Ictidomys_tridecemlineatus
ENSJJAG00000020549	-	82	50.593	ENSKMAG00000008187	slbp	80	54.222	Kryptolebias_marmoratus
ENSJJAG00000020549	-	84	51.953	ENSLBEG00000024709	slbp	76	53.333	Labrus_bergylta
ENSJJAG00000020549	-	95	56.985	ENSLACG00000014623	SLBP	96	56.618	Latimeria_chalumnae
ENSJJAG00000020549	-	100	50.167	ENSLOCG00000011027	slbp	99	50.167	Lepisosteus_oculatus
ENSJJAG00000020549	-	86	83.128	ENSLAFG00000012933	SLBP	100	83.128	Loxodonta_africana
ENSJJAG00000020549	-	91	88.446	ENSMFAG00000030130	SLBP	97	72.862	Macaca_fascicularis
ENSJJAG00000020549	-	93	86.260	ENSMMUG00000032303	SLBP	96	89.401	Macaca_mulatta
ENSJJAG00000020549	-	100	68.085	ENSMNEG00000008082	SLBP	100	67.376	Macaca_nemestrina
ENSJJAG00000020549	-	94	79.457	ENSMLEG00000024639	SLBP	99	78.682	Mandrillus_leucophaeus
ENSJJAG00000020549	-	82	49.603	ENSMAMG00000001046	-	90	48.828	Mastacembelus_armatus
ENSJJAG00000020549	-	82	51.575	ENSMZEG00005017261	-	78	52.074	Maylandia_zebra
ENSJJAG00000020549	-	79	76.959	ENSMGAG00000013085	SLBP	100	76.959	Meleagris_gallopavo
ENSJJAG00000020549	-	100	92.000	ENSMAUG00000009490	Slbp	100	92.000	Mesocricetus_auratus
ENSJJAG00000020549	-	100	86.909	ENSMICG00000014244	SLBP	100	85.818	Microcebus_murinus
ENSJJAG00000020549	-	100	91.273	ENSMOCG00000015826	Slbp	99	91.273	Microtus_ochrogaster
ENSJJAG00000020549	-	85	52.282	ENSMMOG00000010181	slbp	93	50.211	Mola_mola
ENSJJAG00000020549	-	92	82.558	ENSMODG00000004304	SLBP	100	81.992	Monodelphis_domestica
ENSJJAG00000020549	-	84	49.231	ENSMALG00000013883	-	54	55.981	Monopterus_albus
ENSJJAG00000020549	-	100	91.636	MGP_CAROLIEiJ_G0027117	Slbp	100	91.636	Mus_caroli
ENSJJAG00000020549	-	100	92.000	ENSMUSG00000004642	Slbp	100	92.000	Mus_musculus
ENSJJAG00000020549	-	100	92.000	MGP_PahariEiJ_G0016901	Slbp	100	92.000	Mus_pahari
ENSJJAG00000020549	-	100	92.000	MGP_SPRETEiJ_G0028113	Slbp	100	92.000	Mus_spretus
ENSJJAG00000020549	-	70	87.692	ENSMPUG00000011139	SLBP	100	87.692	Mustela_putorius_furo
ENSJJAG00000020549	-	79	87.156	ENSMLUG00000004425	SLBP	93	87.156	Myotis_lucifugus
ENSJJAG00000020549	-	100	90.182	ENSNGAG00000020799	Slbp	100	90.182	Nannospalax_galili
ENSJJAG00000020549	-	76	53.247	ENSNBRG00000006044	-	82	53.881	Neolamprologus_brichardi
ENSJJAG00000020549	-	100	84.397	ENSNLEG00000000048	SLBP	100	83.688	Nomascus_leucogenys
ENSJJAG00000020549	-	65	88.764	ENSMEUG00000002501	SLBP	100	88.764	Notamacropus_eugenii
ENSJJAG00000020549	-	100	85.455	ENSODEG00000012641	SLBP	100	85.455	Octodon_degus
ENSJJAG00000020549	-	82	52.362	ENSONIG00000017469	-	78	52.535	Oreochromis_niloticus
ENSJJAG00000020549	-	79	85.714	ENSOANG00000014243	SLBP	95	85.714	Ornithorhynchus_anatinus
ENSJJAG00000020549	-	84	51.852	ENSORLG00000024887	-	88	49.160	Oryzias_latipes
ENSJJAG00000020549	-	84	52.263	ENSORLG00020007798	slbp	89	49.372	Oryzias_latipes_hni
ENSJJAG00000020549	-	84	52.675	ENSORLG00015016656	slbp	88	50.000	Oryzias_latipes_hsok
ENSJJAG00000020549	-	83	52.479	ENSOMEG00000010818	slbp	90	50.204	Oryzias_melastigma
ENSJJAG00000020549	-	100	87.273	ENSOGAG00000009750	SLBP	100	86.545	Otolemur_garnettii
ENSJJAG00000020549	-	79	91.244	ENSOARG00000016090	SLBP	100	91.244	Ovis_aries
ENSJJAG00000020549	-	100	86.909	ENSPPAG00000033300	SLBP	100	86.182	Pan_paniscus
ENSJJAG00000020549	-	91	90.000	ENSPPRG00000016897	SLBP	100	90.000	Panthera_pardus
ENSJJAG00000020549	-	70	93.229	ENSPTIG00000015057	SLBP	100	93.229	Panthera_tigris_altaica
ENSJJAG00000020549	-	100	86.545	ENSPTRG00000015832	SLBP	100	85.818	Pan_troglodytes
ENSJJAG00000020549	-	100	82.746	ENSPANG00000004932	SLBP	100	82.042	Papio_anubis
ENSJJAG00000020549	-	94	52.143	ENSPKIG00000006183	slbp	94	52.747	Paramormyrops_kingsleyae
ENSJJAG00000020549	-	80	48.908	ENSPMGG00000017684	-	88	58.427	Periophthalmus_magnuspinnatus
ENSJJAG00000020549	-	100	92.000	ENSPEMG00000018369	Slbp	100	92.000	Peromyscus_maniculatus_bairdii
ENSJJAG00000020549	-	100	76.351	ENSPCIG00000013575	SLBP	86	76.351	Phascolarctos_cinereus
ENSJJAG00000020549	-	82	52.439	ENSPFOG00000000462	slbp	85	47.826	Poecilia_formosa
ENSJJAG00000020549	-	82	52.846	ENSPLAG00000008300	slbp	90	47.186	Poecilia_latipinna
ENSJJAG00000020549	-	82	52.439	ENSPMEG00000020807	slbp	85	47.826	Poecilia_mexicana
ENSJJAG00000020549	-	82	52.439	ENSPREG00000004561	slbp	85	47.826	Poecilia_reticulata
ENSJJAG00000020549	-	100	86.545	ENSPPYG00000014529	SLBP	100	85.818	Pongo_abelii
ENSJJAG00000020549	-	100	86.909	ENSPCOG00000017399	SLBP	100	85.818	Propithecus_coquereli
ENSJJAG00000020549	-	100	80.727	ENSPVAG00000002807	SLBP	100	80.727	Pteropus_vampyrus
ENSJJAG00000020549	-	82	51.575	ENSPNYG00000005451	-	78	52.074	Pundamilia_nyererei
ENSJJAG00000020549	-	82	57.500	ENSPNAG00000018503	slbp	89	57.917	Pygocentrus_nattereri
ENSJJAG00000020549	-	100	92.364	ENSRNOG00000037162	Slbp	100	92.364	Rattus_norvegicus
ENSJJAG00000020549	-	100	87.273	ENSRBIG00000039159	SLBP	100	86.545	Rhinopithecus_bieti
ENSJJAG00000020549	-	93	88.281	ENSRROG00000030081	SLBP	95	87.891	Rhinopithecus_roxellana
ENSJJAG00000020549	-	70	87.500	ENSSBOG00000033897	SLBP	100	86.458	Saimiri_boliviensis_boliviensis
ENSJJAG00000020549	-	100	75.251	ENSSHAG00000013939	SLBP	100	75.251	Sarcophilus_harrisii
ENSJJAG00000020549	-	92	54.710	ENSSFOG00015019429	slbp	99	51.636	Scleropages_formosus
ENSJJAG00000020549	-	76	51.724	ENSSMAG00000016028	-	80	52.402	Scophthalmus_maximus
ENSJJAG00000020549	-	75	56.696	ENSSDUG00000000855	-	79	57.014	Seriola_dumerili
ENSJJAG00000020549	-	73	44.500	ENSSLDG00000007554	-	68	44.500	Seriola_lalandi_dorsalis
ENSJJAG00000020549	-	50	54.000	ENSSLDG00000022893	-	87	54.730	Seriola_lalandi_dorsalis
ENSJJAG00000020549	-	100	65.217	ENSSPUG00000016007	SLBP	100	65.217	Sphenodon_punctatus
ENSJJAG00000020549	-	82	53.175	ENSSPAG00000004021	slbp	82	57.477	Stegastes_partitus
ENSJJAG00000020549	-	100	84.364	ENSSSCG00000008676	SLBP	100	84.364	Sus_scrofa
ENSJJAG00000020549	-	93	68.582	ENSTGUG00000010626	-	100	70.498	Taeniopygia_guttata
ENSJJAG00000020549	-	91	49.815	ENSTRUG00000000688	slbp	91	49.801	Takifugu_rubripes
ENSJJAG00000020549	-	88	47.308	ENSTNIG00000000484	-	82	49.545	Tetraodon_nigroviridis
ENSJJAG00000020549	-	68	94.118	ENSTBEG00000004085	SLBP	99	68.379	Tupaia_belangeri
ENSJJAG00000020549	-	79	92.593	ENSTTRG00000010901	-	100	92.593	Tursiops_truncatus
ENSJJAG00000020549	-	65	87.640	ENSTTRG00000004010	-	100	87.640	Tursiops_truncatus
ENSJJAG00000020549	-	100	88.087	ENSUAMG00000012990	SLBP	100	88.087	Ursus_americanus
ENSJJAG00000020549	-	70	91.667	ENSUMAG00000006119	SLBP	100	91.667	Ursus_maritimus
ENSJJAG00000020549	-	100	85.818	ENSVVUG00000015578	-	100	85.818	Vulpes_vulpes
ENSJJAG00000020549	-	97	55.636	ENSXETG00000003876	slbp	97	58.303	Xenopus_tropicalis
ENSJJAG00000020549	-	72	55.607	ENSXCOG00000008275	slbp	90	47.845	Xiphophorus_couchianus
ENSJJAG00000020549	-	82	52.439	ENSXMAG00000001331	-	84	47.826	Xiphophorus_maculatus