EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000021181 (Gene tree)
Gene ID: 101614956
Gene Symbol: Rab5c
Alias: -
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 28914 bases
Position: chrJH725452.1:25019541-25048454
Accession: 101614956
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000020547	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000027095	-	1658	XM_004655373	ENSJJAP00000020547	216 (aa)	XP_004655430	UPI0003330BAD

Gene Model

Click here to download ENSJJAG00000021181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000021181's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000021181	Rab5c	60	32.061	ENSJJAG00000020941	-	98	31.579
ENSJJAG00000021181	Rab5c	77	42.442	ENSJJAG00000014204	Rab7	79	48.000
ENSJJAG00000021181	Rab5c	89	35.354	ENSJJAG00000005838	Rab9	97	35.354
ENSJJAG00000021181	Rab5c	80	35.838	ENSJJAG00000020094	Rab23	73	35.838
ENSJJAG00000021181	Rab5c	100	86.111	ENSJJAG00000020190	Rab5a	100	86.111
ENSJJAG00000021181	Rab5c	81	33.702	ENSJJAG00000022529	-	94	33.702
ENSJJAG00000021181	Rab5c	73	31.250	ENSJJAG00000010285	Rab34	62	31.250
ENSJJAG00000021181	Rab5c	75	44.720	ENSJJAG00000000676	Rab2a	76	44.720
ENSJJAG00000021181	Rab5c	78	42.604	ENSJJAG00000020064	Rab30	83	42.604
ENSJJAG00000021181	Rab5c	75	36.585	ENSJJAG00000016977	Rab39b	77	36.585
ENSJJAG00000021181	Rab5c	90	41.748	ENSJJAG00000015445	Rab11a	94	41.748
ENSJJAG00000021181	Rab5c	90	41.748	ENSJJAG00000012036	-	94	41.748
ENSJJAG00000021181	Rab5c	78	35.196	ENSJJAG00000011100	Rab36	75	35.196
ENSJJAG00000021181	Rab5c	89	44.388	ENSJJAG00000014396	Rab1a	98	44.388
ENSJJAG00000021181	Rab5c	90	47.423	ENSJJAG00000011551	-	98	47.423
ENSJJAG00000021181	Rab5c	89	44.330	ENSJJAG00000016545	Rab1b	96	44.330
ENSJJAG00000021181	Rab5c	89	38.021	ENSJJAG00000010575	Rab13	95	38.021
ENSJJAG00000021181	Rab5c	90	42.857	ENSJJAG00000021013	Rab25	94	42.857
ENSJJAG00000021181	Rab5c	75	40.361	ENSJJAG00000007444	Rab33a	70	40.361
ENSJJAG00000021181	Rab5c	68	33.333	ENSJJAG00000011743	-	84	33.333
ENSJJAG00000021181	Rab5c	77	32.934	ENSJJAG00000016513	-	95	30.387
ENSJJAG00000021181	Rab5c	87	36.842	ENSJJAG00000019064	Rab12	97	33.632
ENSJJAG00000021181	Rab5c	91	45.918	ENSJJAG00000000852	Rab31	98	45.918
ENSJJAG00000021181	Rab5c	55	31.148	ENSJJAG00000023105	Arl8a	62	31.148
ENSJJAG00000021181	Rab5c	97	86.124	ENSJJAG00000019506	Rab5b	97	86.124
ENSJJAG00000021181	Rab5c	76	42.683	ENSJJAG00000012923	-	76	42.683
ENSJJAG00000021181	Rab5c	90	42.512	ENSJJAG00000018891	Rab11b	94	42.512
ENSJJAG00000021181	Rab5c	89	37.949	ENSJJAG00000010646	Rab35	96	37.949
ENSJJAG00000021181	Rab5c	71	35.948	ENSJJAG00000010792	Rabl2	67	35.948

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000021181	Rab5c	100	99.074	ENSG00000108774	RAB5C	100	100.000	Homo_sapiens
ENSJJAG00000021181	Rab5c	99	88.837	ENSAPOG00000016864	rab5c	98	91.163	Acanthochromis_polyacanthus
ENSJJAG00000021181	Rab5c	100	99.074	ENSAMEG00000006003	RAB5C	100	99.074	Ailuropoda_melanoleuca
ENSJJAG00000021181	Rab5c	99	88.426	ENSACIG00000010896	rab5c	98	90.741	Amphilophus_citrinellus
ENSJJAG00000021181	Rab5c	99	88.889	ENSAOCG00000016614	rab5c	98	91.204	Amphiprion_ocellaris
ENSJJAG00000021181	Rab5c	97	88.626	ENSAPEG00000017868	-	97	90.995	Amphiprion_percula
ENSJJAG00000021181	Rab5c	100	89.450	ENSATEG00000001937	rab5c	100	91.284	Anabas_testudineus
ENSJJAG00000021181	Rab5c	94	99.020	ENSANAG00000025390	RAB5C	100	99.020	Aotus_nancymaae
ENSJJAG00000021181	Rab5c	99	87.500	ENSACLG00000002706	rab5c	98	90.278	Astatotilapia_calliptera
ENSJJAG00000021181	Rab5c	96	90.047	ENSACLG00000008615	-	99	89.498	Astatotilapia_calliptera
ENSJJAG00000021181	Rab5c	99	89.401	ENSAMXG00000043717	rab5c	98	91.705	Astyanax_mexicanus
ENSJJAG00000021181	Rab5c	96	88.571	ENSAMXG00000037267	-	99	90.952	Astyanax_mexicanus
ENSJJAG00000021181	Rab5c	100	99.074	ENSBTAG00000006982	RAB5C	100	99.074	Bos_taurus
ENSJJAG00000021181	Rab5c	99	74.429	WBGene00004268	rab-5	99	74.429	Caenorhabditis_elegans
ENSJJAG00000021181	Rab5c	100	98.611	ENSCAFG00000015629	RAB5C	100	98.611	Canis_familiaris
ENSJJAG00000021181	Rab5c	100	98.611	ENSCAFG00020013537	RAB5C	100	98.611	Canis_lupus_dingo
ENSJJAG00000021181	Rab5c	100	99.074	ENSCHIG00000012960	RAB5C	100	99.074	Capra_hircus
ENSJJAG00000021181	Rab5c	100	99.537	ENSTSYG00000030531	RAB5C	100	99.537	Carlito_syrichta
ENSJJAG00000021181	Rab5c	100	98.611	ENSCCAG00000025940	RAB5C	100	98.611	Cebus_capucinus
ENSJJAG00000021181	Rab5c	100	99.074	ENSCATG00000040873	RAB5C	100	99.074	Cercocebus_atys
ENSJJAG00000021181	Rab5c	100	97.222	ENSCLAG00000016650	RAB5C	100	97.222	Chinchilla_lanigera
ENSJJAG00000021181	Rab5c	82	99.438	ENSCHOG00000009886	RAB5C	100	99.438	Choloepus_hoffmanni
ENSJJAG00000021181	Rab5c	99	76.636	ENSCING00000003340	-	99	76.636	Ciona_intestinalis
ENSJJAG00000021181	Rab5c	99	75.000	ENSCSAVG00000000613	-	99	83.333	Ciona_savignyi
ENSJJAG00000021181	Rab5c	100	98.611	ENSCGRG00001014226	Rab5c	100	98.611	Cricetulus_griseus_chok1gshd
ENSJJAG00000021181	Rab5c	100	98.611	ENSCGRG00000007534	Rab5c	100	98.611	Cricetulus_griseus_crigri
ENSJJAG00000021181	Rab5c	99	91.204	ENSCSEG00000017024	rab5c	98	91.204	Cynoglossus_semilaevis
ENSJJAG00000021181	Rab5c	99	88.889	ENSCVAG00000009550	rab5c	98	91.204	Cyprinodon_variegatus
ENSJJAG00000021181	Rab5c	100	99.537	ENSDNOG00000038853	RAB5C	100	99.537	Dasypus_novemcinctus
ENSJJAG00000021181	Rab5c	100	98.611	ENSDORG00000006819	Rab5c	100	98.611	Dipodomys_ordii
ENSJJAG00000021181	Rab5c	99	74.648	FBgn0014010	Rab5	95	74.648	Drosophila_melanogaster
ENSJJAG00000021181	Rab5c	99	79.535	ENSEBUG00000014794	rab5c	100	79.535	Eptatretus_burgeri
ENSJJAG00000021181	Rab5c	100	99.074	ENSEASG00005009281	RAB5C	100	99.074	Equus_asinus_asinus
ENSJJAG00000021181	Rab5c	100	99.537	ENSECAG00000025054	RAB5C	100	99.537	Equus_caballus
ENSJJAG00000021181	Rab5c	100	99.074	ENSEEUG00000002790	RAB5C	100	99.074	Erinaceus_europaeus
ENSJJAG00000021181	Rab5c	99	88.426	ENSELUG00000010439	-	98	88.426	Esox_lucius
ENSJJAG00000021181	Rab5c	99	87.500	ENSELUG00000018516	rab5c	99	90.278	Esox_lucius
ENSJJAG00000021181	Rab5c	100	99.074	ENSFCAG00000002148	RAB5C	100	99.074	Felis_catus
ENSJJAG00000021181	Rab5c	100	95.370	ENSFDAG00000021541	RAB5C	100	95.370	Fukomys_damarensis
ENSJJAG00000021181	Rab5c	99	88.889	ENSFHEG00000012117	rab5c	98	91.204	Fundulus_heteroclitus
ENSJJAG00000021181	Rab5c	99	91.244	ENSFHEG00000015268	-	99	91.244	Fundulus_heteroclitus
ENSJJAG00000021181	Rab5c	80	87.209	ENSGMOG00000001876	-	99	87.209	Gadus_morhua
ENSJJAG00000021181	Rab5c	99	87.500	ENSGMOG00000015096	rab5c	98	90.278	Gadus_morhua
ENSJJAG00000021181	Rab5c	99	89.352	ENSGAFG00000000884	rab5c	98	91.667	Gambusia_affinis
ENSJJAG00000021181	Rab5c	96	91.429	ENSGAFG00000003642	-	99	88.636	Gambusia_affinis
ENSJJAG00000021181	Rab5c	87	94.681	ENSGACG00000008659	rab5c	98	87.037	Gasterosteus_aculeatus
ENSJJAG00000021181	Rab5c	100	99.074	ENSGGOG00000005472	RAB5C	100	99.074	Gorilla_gorilla
ENSJJAG00000021181	Rab5c	99	87.500	ENSHBUG00000002014	rab5c	98	90.278	Haplochromis_burtoni
ENSJJAG00000021181	Rab5c	96	90.047	ENSHBUG00000006823	-	99	89.498	Haplochromis_burtoni
ENSJJAG00000021181	Rab5c	100	95.833	ENSHGLG00000012067	RAB5C	100	95.833	Heterocephalus_glaber_female
ENSJJAG00000021181	Rab5c	97	82.075	ENSHCOG00000020238	-	100	80.455	Hippocampus_comes
ENSJJAG00000021181	Rab5c	99	89.401	ENSHCOG00000004662	rab5c	97	91.244	Hippocampus_comes
ENSJJAG00000021181	Rab5c	96	87.619	ENSIPUG00000020082	rab5c	98	88.532	Ictalurus_punctatus
ENSJJAG00000021181	Rab5c	100	97.685	ENSSTOG00000006620	RAB5C	100	97.685	Ictidomys_tridecemlineatus
ENSJJAG00000021181	Rab5c	99	88.479	ENSKMAG00000017417	-	99	88.479	Kryptolebias_marmoratus
ENSJJAG00000021181	Rab5c	99	88.426	ENSKMAG00000020038	rab5c	98	91.204	Kryptolebias_marmoratus
ENSJJAG00000021181	Rab5c	100	88.073	ENSLBEG00000010408	-	99	88.073	Labrus_bergylta
ENSJJAG00000021181	Rab5c	99	89.815	ENSLBEG00000004128	rab5c	98	92.130	Labrus_bergylta
ENSJJAG00000021181	Rab5c	99	92.991	ENSLOCG00000012566	rab5c	100	92.991	Lepisosteus_oculatus
ENSJJAG00000021181	Rab5c	100	99.074	ENSMFAG00000039627	RAB5C	100	99.074	Macaca_fascicularis
ENSJJAG00000021181	Rab5c	100	99.074	ENSMNEG00000000355	RAB5C	100	99.074	Macaca_nemestrina
ENSJJAG00000021181	Rab5c	99	87.963	ENSMAMG00000022322	rab5c	98	90.741	Mastacembelus_armatus
ENSJJAG00000021181	Rab5c	99	88.479	ENSMAMG00000016207	-	99	88.479	Mastacembelus_armatus
ENSJJAG00000021181	Rab5c	99	87.500	ENSMZEG00005022735	rab5c	98	90.278	Maylandia_zebra
ENSJJAG00000021181	Rab5c	96	90.047	ENSMZEG00005021090	-	99	89.498	Maylandia_zebra
ENSJJAG00000021181	Rab5c	100	99.074	ENSMAUG00000015005	Rab5c	100	99.074	Mesocricetus_auratus
ENSJJAG00000021181	Rab5c	100	99.074	ENSMICG00000041608	RAB5C	100	99.074	Microcebus_murinus
ENSJJAG00000021181	Rab5c	100	98.611	ENSMOCG00000018531	-	100	98.611	Microtus_ochrogaster
ENSJJAG00000021181	Rab5c	100	89.908	ENSMMOG00000020621	rab5c	99	89.908	Mola_mola
ENSJJAG00000021181	Rab5c	97	84.360	ENSMALG00000006052	rab5c	96	84.186	Monopterus_albus
ENSJJAG00000021181	Rab5c	99	87.615	ENSMALG00000022348	-	99	87.615	Monopterus_albus
ENSJJAG00000021181	Rab5c	100	98.611	MGP_CAROLIEiJ_G0017184	Rab5c	100	98.611	Mus_caroli
ENSJJAG00000021181	Rab5c	100	98.611	ENSMUSG00000019173	Rab5c	100	98.611	Mus_musculus
ENSJJAG00000021181	Rab5c	100	98.611	MGP_PahariEiJ_G0018314	Rab5c	100	98.611	Mus_pahari
ENSJJAG00000021181	Rab5c	100	98.611	MGP_SPRETEiJ_G0018027	Rab5c	100	98.611	Mus_spretus
ENSJJAG00000021181	Rab5c	100	99.074	ENSMPUG00000010554	RAB5C	100	99.074	Mustela_putorius_furo
ENSJJAG00000021181	Rab5c	100	98.148	ENSNGAG00000010286	Rab5c	100	98.148	Nannospalax_galili
ENSJJAG00000021181	Rab5c	96	90.047	ENSNBRG00000016922	-	99	89.498	Neolamprologus_brichardi
ENSJJAG00000021181	Rab5c	99	88.426	ENSNBRG00000018165	rab5c	98	91.204	Neolamprologus_brichardi
ENSJJAG00000021181	Rab5c	82	92.697	ENSOPRG00000008255	RAB5C	100	92.697	Ochotona_princeps
ENSJJAG00000021181	Rab5c	100	96.296	ENSODEG00000017920	RAB5C	100	96.296	Octodon_degus
ENSJJAG00000021181	Rab5c	99	88.426	ENSONIG00000001113	rab5c	98	91.204	Oreochromis_niloticus
ENSJJAG00000021181	Rab5c	100	88.073	ENSORLG00000003882	rab5c	100	89.908	Oryzias_latipes
ENSJJAG00000021181	Rab5c	100	89.450	ENSORLG00020008388	rab5c	100	89.450	Oryzias_latipes_hni
ENSJJAG00000021181	Rab5c	100	88.073	ENSORLG00015021900	rab5c	100	89.908	Oryzias_latipes_hsok
ENSJJAG00000021181	Rab5c	100	88.073	ENSOMEG00000023078	rab5c	100	89.908	Oryzias_melastigma
ENSJJAG00000021181	Rab5c	100	99.074	ENSOGAG00000009456	RAB5C	100	99.074	Otolemur_garnettii
ENSJJAG00000021181	Rab5c	100	99.074	ENSOARG00000018768	RAB5C	100	99.074	Ovis_aries
ENSJJAG00000021181	Rab5c	100	99.074	ENSPPAG00000037206	RAB5C	100	99.074	Pan_paniscus
ENSJJAG00000021181	Rab5c	100	99.074	ENSPPRG00000005745	RAB5C	100	99.074	Panthera_pardus
ENSJJAG00000021181	Rab5c	100	99.074	ENSPTIG00000008177	RAB5C	100	99.074	Panthera_tigris_altaica
ENSJJAG00000021181	Rab5c	100	99.074	ENSPTRG00000009194	RAB5C	100	99.074	Pan_troglodytes
ENSJJAG00000021181	Rab5c	99	87.963	ENSPKIG00000020112	-	99	87.963	Paramormyrops_kingsleyae
ENSJJAG00000021181	Rab5c	99	89.302	ENSPKIG00000001237	-	99	89.302	Paramormyrops_kingsleyae
ENSJJAG00000021181	Rab5c	99	85.648	ENSPMGG00000010792	rab5c	97	90.047	Periophthalmus_magnuspinnatus
ENSJJAG00000021181	Rab5c	100	98.611	ENSPEMG00000017971	Rab5c	100	98.611	Peromyscus_maniculatus_bairdii
ENSJJAG00000021181	Rab5c	99	78.125	ENSPMAG00000000008	rab5c	100	78.125	Petromyzon_marinus
ENSJJAG00000021181	Rab5c	99	78.972	ENSPMAG00000007867	rab5c	99	78.972	Petromyzon_marinus
ENSJJAG00000021181	Rab5c	99	79.535	ENSPMAG00000001399	rab5c	100	79.535	Petromyzon_marinus
ENSJJAG00000021181	Rab5c	100	97.222	ENSPCIG00000020225	-	100	97.222	Phascolarctos_cinereus
ENSJJAG00000021181	Rab5c	99	89.352	ENSPLAG00000004790	rab5c	98	91.667	Poecilia_latipinna
ENSJJAG00000021181	Rab5c	99	90.323	ENSPLAG00000016333	-	99	90.323	Poecilia_latipinna
ENSJJAG00000021181	Rab5c	99	89.352	ENSPMEG00000011336	rab5c	98	91.667	Poecilia_mexicana
ENSJJAG00000021181	Rab5c	98	88.732	ENSPMEG00000012614	-	98	89.041	Poecilia_mexicana
ENSJJAG00000021181	Rab5c	87	92.593	ENSPREG00000022167	-	89	93.989	Poecilia_reticulata
ENSJJAG00000021181	Rab5c	99	89.352	ENSPREG00000010146	rab5c	98	91.667	Poecilia_reticulata
ENSJJAG00000021181	Rab5c	100	99.074	ENSPPYG00000008398	RAB5C	100	99.074	Pongo_abelii
ENSJJAG00000021181	Rab5c	100	98.148	ENSPCAG00000016412	RAB5C	100	98.148	Procavia_capensis
ENSJJAG00000021181	Rab5c	100	98.148	ENSPCOG00000026327	RAB5C	100	98.148	Propithecus_coquereli
ENSJJAG00000021181	Rab5c	100	99.537	ENSPVAG00000003867	RAB5C	100	99.537	Pteropus_vampyrus
ENSJJAG00000021181	Rab5c	99	87.500	ENSPNYG00000010615	rab5c	98	90.278	Pundamilia_nyererei
ENSJJAG00000021181	Rab5c	96	90.047	ENSPNYG00000015851	-	99	89.498	Pundamilia_nyererei
ENSJJAG00000021181	Rab5c	99	91.244	ENSPNAG00000028138	rab5c	98	91.244	Pygocentrus_nattereri
ENSJJAG00000021181	Rab5c	97	86.792	ENSPNAG00000002218	-	99	89.151	Pygocentrus_nattereri
ENSJJAG00000021181	Rab5c	100	99.074	ENSRNOG00000018568	Rab5c	100	99.074	Rattus_norvegicus
ENSJJAG00000021181	Rab5c	100	99.074	ENSRBIG00000031376	RAB5C	100	99.074	Rhinopithecus_bieti
ENSJJAG00000021181	Rab5c	100	99.074	ENSRROG00000032895	RAB5C	100	99.074	Rhinopithecus_roxellana
ENSJJAG00000021181	Rab5c	100	98.611	ENSSBOG00000032552	-	100	98.611	Saimiri_boliviensis_boliviensis
ENSJJAG00000021181	Rab5c	100	97.685	ENSSHAG00000005267	-	100	97.685	Sarcophilus_harrisii
ENSJJAG00000021181	Rab5c	99	87.558	ENSSFOG00015009988	-	99	87.558	Scleropages_formosus
ENSJJAG00000021181	Rab5c	96	92.308	ENSSMAG00000007323	rab5c	98	90.278	Scophthalmus_maximus
ENSJJAG00000021181	Rab5c	99	91.667	ENSSDUG00000023008	rab5c	98	91.667	Seriola_dumerili
ENSJJAG00000021181	Rab5c	99	91.204	ENSSLDG00000017771	rab5c	98	91.204	Seriola_lalandi_dorsalis
ENSJJAG00000021181	Rab5c	100	95.833	ENSSPUG00000012950	-	100	95.833	Sphenodon_punctatus
ENSJJAG00000021181	Rab5c	99	89.352	ENSSPAG00000006436	rab5c	98	92.130	Stegastes_partitus
ENSJJAG00000021181	Rab5c	100	99.074	ENSSSCG00000032467	RAB5C	100	99.074	Sus_scrofa
ENSJJAG00000021181	Rab5c	99	87.963	ENSTRUG00000015590	rab5c	98	90.278	Takifugu_rubripes
ENSJJAG00000021181	Rab5c	96	90.909	ENSTNIG00000011711	rab5c	95	90.909	Tetraodon_nigroviridis
ENSJJAG00000021181	Rab5c	100	99.074	ENSTBEG00000007092	RAB5C	100	99.074	Tupaia_belangeri
ENSJJAG00000021181	Rab5c	100	99.074	ENSTTRG00000006673	RAB5C	100	99.074	Tursiops_truncatus
ENSJJAG00000021181	Rab5c	100	99.074	ENSUAMG00000024343	RAB5C	100	99.074	Ursus_americanus
ENSJJAG00000021181	Rab5c	100	99.074	ENSUMAG00000023270	RAB5C	100	99.074	Ursus_maritimus
ENSJJAG00000021181	Rab5c	96	91.905	ENSXCOG00000006300	-	99	88.688	Xiphophorus_couchianus
ENSJJAG00000021181	Rab5c	99	88.889	ENSXCOG00000016788	rab5c	98	91.667	Xiphophorus_couchianus
ENSJJAG00000021181	Rab5c	99	90.783	ENSXMAG00000022179	-	99	90.783	Xiphophorus_maculatus
ENSJJAG00000021181	Rab5c	99	89.352	ENSXMAG00000003266	rab5c	98	91.667	Xiphophorus_maculatus