EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000021279 (Gene tree)
Gene ID: -
Gene Symbol: Rrp1b
Alias: 2600005C20Rik
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 27299 bases
Position: chrJH725450.1:38880122-38907420
Accession: 101617002
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000020677	Nop52	PF05997.12	5.3e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000027226	-	2190	XM_004654614	ENSJJAP00000020677	729 (aa)	XP_004654671	-

Gene Model

Click here to download ENSJJAG00000021279's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000021279's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000021279	Rrp1b	100	60.988	ENSG00000160208	RRP1B	100	60.598	Homo_sapiens
ENSJJAG00000021279	Rrp1b	72	75.758	ENSAMEG00000011401	RRP1B	65	76.866	Ailuropoda_melanoleuca
ENSJJAG00000021279	Rrp1b	54	52.113	ENSAOCG00000017894	-	88	54.000	Amphiprion_ocellaris
ENSJJAG00000021279	Rrp1b	94	40.775	ENSAPLG00000004310	RRP1B	100	41.744	Anas_platyrhynchos
ENSJJAG00000021279	Rrp1b	100	59.403	ENSANAG00000034889	RRP1B	100	59.144	Aotus_nancymaae
ENSJJAG00000021279	Rrp1b	100	54.868	ENSBTAG00000017418	RRP1B	100	54.796	Bos_taurus
ENSJJAG00000021279	Rrp1b	50	47.150	ENSCJAG00000043205	RRP1	66	49.552	Callithrix_jacchus
ENSJJAG00000021279	Rrp1b	100	57.032	ENSCJAG00000017077	RRP1B	100	56.645	Callithrix_jacchus
ENSJJAG00000021279	Rrp1b	94	56.328	ENSCAFG00000010621	RRP1B	99	56.128	Canis_familiaris
ENSJJAG00000021279	Rrp1b	100	57.405	ENSCAFG00020018901	RRP1B	100	57.480	Canis_lupus_dingo
ENSJJAG00000021279	Rrp1b	100	54.737	ENSCHIG00000021519	RRP1B	100	55.731	Capra_hircus
ENSJJAG00000021279	Rrp1b	100	56.974	ENSCPOG00000002396	RRP1B	100	56.168	Cavia_porcellus
ENSJJAG00000021279	Rrp1b	54	46.411	ENSCCAG00000029828	RRP1	70	49.851	Cebus_capucinus
ENSJJAG00000021279	Rrp1b	100	59.428	ENSCCAG00000029384	RRP1B	100	58.366	Cebus_capucinus
ENSJJAG00000021279	Rrp1b	100	60.677	ENSCATG00000017423	RRP1B	100	60.286	Cercocebus_atys
ENSJJAG00000021279	Rrp1b	52	43.717	ENSCLAG00000011639	RRP1	73	47.041	Chinchilla_lanigera
ENSJJAG00000021279	Rrp1b	100	60.338	ENSCSAG00000007961	RRP1B	100	59.948	Chlorocebus_sabaeus
ENSJJAG00000021279	Rrp1b	53	50.985	ENSCHOG00000002426	-	54	56.433	Choloepus_hoffmanni
ENSJJAG00000021279	Rrp1b	99	44.015	ENSCPBG00000010310	RRP1B	98	42.276	Chrysemys_picta_bellii
ENSJJAG00000021279	Rrp1b	100	60.208	ENSCANG00000040952	RRP1B	100	59.818	Colobus_angolensis_palliatus
ENSJJAG00000021279	Rrp1b	50	44.800	ENSCGRG00001011920	Rrp1	78	44.847	Cricetulus_griseus_chok1gshd
ENSJJAG00000021279	Rrp1b	100	65.086	ENSCGRG00001010889	-	100	64.559	Cricetulus_griseus_chok1gshd
ENSJJAG00000021279	Rrp1b	100	64.690	ENSCGRG00001023882	-	100	64.163	Cricetulus_griseus_chok1gshd
ENSJJAG00000021279	Rrp1b	94	63.547	ENSCGRG00000001553	Rrp1b	97	62.901	Cricetulus_griseus_crigri
ENSJJAG00000021279	Rrp1b	50	44.800	ENSCGRG00000008915	Rrp1	78	44.847	Cricetulus_griseus_crigri
ENSJJAG00000021279	Rrp1b	56	58.140	ENSCSEG00000020711	-	94	45.210	Cynoglossus_semilaevis
ENSJJAG00000021279	Rrp1b	51	38.601	ENSCVAG00000017568	-	87	40.456	Cyprinodon_variegatus
ENSJJAG00000021279	Rrp1b	100	55.065	ENSDNOG00000032774	RRP1B	100	54.334	Dasypus_novemcinctus
ENSJJAG00000021279	Rrp1b	59	42.694	ENSDNOG00000019880	RRP1	71	48.204	Dasypus_novemcinctus
ENSJJAG00000021279	Rrp1b	93	56.571	ENSDORG00000005496	Rrp1b	100	56.652	Dipodomys_ordii
ENSJJAG00000021279	Rrp1b	100	49.213	ENSETEG00000019489	RRP1B	100	49.605	Echinops_telfairi
ENSJJAG00000021279	Rrp1b	100	59.144	ENSEASG00005001687	RRP1B	100	59.583	Equus_asinus_asinus
ENSJJAG00000021279	Rrp1b	51	42.377	ENSEASG00005001673	RRP1	73	46.491	Equus_asinus_asinus
ENSJJAG00000021279	Rrp1b	100	59.014	ENSECAG00000018018	RRP1B	100	59.452	Equus_caballus
ENSJJAG00000021279	Rrp1b	54	40.049	ENSECAG00000015703	RRP1	73	46.921	Equus_caballus
ENSJJAG00000021279	Rrp1b	62	54.032	ENSELUG00000015885	-	90	42.274	Esox_lucius
ENSJJAG00000021279	Rrp1b	51	46.667	ENSFCAG00000008434	RRP1	71	49.091	Felis_catus
ENSJJAG00000021279	Rrp1b	100	57.162	ENSFCAG00000010272	RRP1B	100	58.026	Felis_catus
ENSJJAG00000021279	Rrp1b	63	38.841	ENSFDAG00000013728	RRP1	73	45.748	Fukomys_damarensis
ENSJJAG00000021279	Rrp1b	96	55.220	ENSFDAG00000010899	RRP1B	96	55.632	Fukomys_damarensis
ENSJJAG00000021279	Rrp1b	57	52.688	ENSFHEG00000016314	-	50	41.722	Fundulus_heteroclitus
ENSJJAG00000021279	Rrp1b	60	50.467	ENSGMOG00000001953	-	60	50.467	Gadus_morhua
ENSJJAG00000021279	Rrp1b	65	44.218	ENSGACG00000001438	rrp1	70	41.892	Gasterosteus_aculeatus
ENSJJAG00000021279	Rrp1b	100	42.857	ENSGAGG00000000375	RRP1B	100	42.697	Gopherus_agassizii
ENSJJAG00000021279	Rrp1b	100	61.248	ENSGGOG00000012069	RRP1B	100	60.858	Gorilla_gorilla
ENSJJAG00000021279	Rrp1b	99	57.180	ENSHGLG00000004968	RRP1B	100	56.901	Heterocephalus_glaber_female
ENSJJAG00000021279	Rrp1b	89	56.923	ENSHGLG00100002232	RRP1B	98	50.068	Heterocephalus_glaber_male
ENSJJAG00000021279	Rrp1b	67	45.312	ENSHCOG00000018388	-	55	45.312	Hippocampus_comes
ENSJJAG00000021279	Rrp1b	60	42.991	ENSIPUG00000000673	-	66	38.571	Ictalurus_punctatus
ENSJJAG00000021279	Rrp1b	99	60.743	ENSSTOG00000011790	RRP1B	96	60.367	Ictidomys_tridecemlineatus
ENSJJAG00000021279	Rrp1b	52	44.862	ENSSTOG00000011116	RRP1	73	49.848	Ictidomys_tridecemlineatus
ENSJJAG00000021279	Rrp1b	64	47.183	ENSKMAG00000005539	rrp1	70	47.183	Kryptolebias_marmoratus
ENSJJAG00000021279	Rrp1b	55	43.839	ENSLAFG00000022901	RRP1	74	48.246	Loxodonta_africana
ENSJJAG00000021279	Rrp1b	88	53.994	ENSLAFG00000000766	RRP1B	99	53.502	Loxodonta_africana
ENSJJAG00000021279	Rrp1b	100	60.728	ENSMFAG00000039152	RRP1B	100	59.818	Macaca_fascicularis
ENSJJAG00000021279	Rrp1b	100	58.464	ENSMMUG00000000104	RRP1B	100	57.552	Macaca_mulatta
ENSJJAG00000021279	Rrp1b	100	60.468	ENSMNEG00000034269	RRP1B	100	59.558	Macaca_nemestrina
ENSJJAG00000021279	Rrp1b	54	46.944	ENSMNEG00000031210	RRP1	70	51.198	Macaca_nemestrina
ENSJJAG00000021279	Rrp1b	100	57.458	ENSMLEG00000040044	RRP1B	99	59.034	Mandrillus_leucophaeus
ENSJJAG00000021279	Rrp1b	74	51.429	ENSMGAG00000014591	RRP1B	78	51.093	Meleagris_gallopavo
ENSJJAG00000021279	Rrp1b	50	39.305	ENSMAUG00000017653	Rrp1	72	39.766	Mesocricetus_auratus
ENSJJAG00000021279	Rrp1b	100	63.818	ENSMAUG00000021508	Rrp1b	100	63.279	Mesocricetus_auratus
ENSJJAG00000021279	Rrp1b	100	61.488	ENSMICG00000004686	RRP1B	100	60.966	Microcebus_murinus
ENSJJAG00000021279	Rrp1b	100	61.842	ENSMOCG00000001117	Rrp1b	100	60.586	Microtus_ochrogaster
ENSJJAG00000021279	Rrp1b	100	52.387	ENSMODG00000021033	RRP1B	100	53.282	Monodelphis_domestica
ENSJJAG00000021279	Rrp1b	100	60.453	MGP_CAROLIEiJ_G0021376	Rrp1b	100	59.521	Mus_caroli
ENSJJAG00000021279	Rrp1b	100	61.879	ENSMUSG00000058392	Rrp1b	100	61.104	Mus_musculus
ENSJJAG00000021279	Rrp1b	100	61.457	MGP_PahariEiJ_G0023695	Rrp1b	100	60.530	Mus_pahari
ENSJJAG00000021279	Rrp1b	100	59.205	MGP_SPRETEiJ_G0022290	Rrp1b	100	58.699	Mus_spretus
ENSJJAG00000021279	Rrp1b	83	50.235	ENSMPUG00000009810	RRP1B	99	49.922	Mustela_putorius_furo
ENSJJAG00000021279	Rrp1b	99	57.256	ENSMLUG00000007738	RRP1B	99	56.974	Myotis_lucifugus
ENSJJAG00000021279	Rrp1b	50	55.556	ENSMLUG00000017788	RRP1	59	65.000	Myotis_lucifugus
ENSJJAG00000021279	Rrp1b	100	63.915	ENSNGAG00000021073	Rrp1b	100	63.515	Nannospalax_galili
ENSJJAG00000021279	Rrp1b	100	60.447	ENSNLEG00000001490	RRP1B	100	60.053	Nomascus_leucogenys
ENSJJAG00000021279	Rrp1b	64	73.626	ENSMEUG00000003226	-	80	75.824	Notamacropus_eugenii
ENSJJAG00000021279	Rrp1b	100	56.568	ENSODEG00000013177	RRP1B	100	55.556	Octodon_degus
ENSJJAG00000021279	Rrp1b	99	45.335	ENSOANG00000006470	RRP1B	99	45.658	Ornithorhynchus_anatinus
ENSJJAG00000021279	Rrp1b	57	55.914	ENSORLG00020007199	-	50	55.914	Oryzias_latipes_hni
ENSJJAG00000021279	Rrp1b	61	43.902	ENSORLG00015004425	-	51	47.656	Oryzias_latipes_hsok
ENSJJAG00000021279	Rrp1b	56	58.025	ENSOMEG00000016910	-	68	42.433	Oryzias_melastigma
ENSJJAG00000021279	Rrp1b	50	44.531	ENSOGAG00000006105	RRP1	73	49.118	Otolemur_garnettii
ENSJJAG00000021279	Rrp1b	70	80.172	ENSOGAG00000009872	RRP1B	87	80.172	Otolemur_garnettii
ENSJJAG00000021279	Rrp1b	94	52.654	ENSOARG00000011314	RRP1B	100	52.999	Ovis_aries
ENSJJAG00000021279	Rrp1b	94	59.504	ENSPPAG00000035319	RRP1B	99	59.010	Pan_paniscus
ENSJJAG00000021279	Rrp1b	51	46.524	ENSPPRG00000010656	RRP1	72	49.091	Panthera_pardus
ENSJJAG00000021279	Rrp1b	100	57.275	ENSPPRG00000010356	RRP1B	100	57.672	Panthera_pardus
ENSJJAG00000021279	Rrp1b	82	59.012	ENSPTIG00000016894	RRP1B	99	58.333	Panthera_tigris_altaica
ENSJJAG00000021279	Rrp1b	100	60.858	ENSPTRG00000013958	RRP1B	100	60.468	Pan_troglodytes
ENSJJAG00000021279	Rrp1b	100	60.677	ENSPANG00000011090	RRP1B	100	60.286	Papio_anubis
ENSJJAG00000021279	Rrp1b	52	47.277	ENSPANG00000015097	RRP1	70	51.343	Papio_anubis
ENSJJAG00000021279	Rrp1b	99	43.593	ENSPSIG00000008152	RRP1B	96	42.750	Pelodiscus_sinensis
ENSJJAG00000021279	Rrp1b	100	63.095	ENSPEMG00000022490	Rrp1b	100	62.963	Peromyscus_maniculatus_bairdii
ENSJJAG00000021279	Rrp1b	100	54.092	ENSPCIG00000015513	RRP1B	100	53.905	Phascolarctos_cinereus
ENSJJAG00000021279	Rrp1b	54	48.889	ENSPCIG00000015523	-	74	51.989	Phascolarctos_cinereus
ENSJJAG00000021279	Rrp1b	84	38.918	ENSPMEG00000007042	-	67	41.390	Poecilia_mexicana
ENSJJAG00000021279	Rrp1b	69	46.358	ENSPREG00000015673	-	57	46.358	Poecilia_reticulata
ENSJJAG00000021279	Rrp1b	100	61.248	ENSPPYG00000011470	RRP1B	100	60.858	Pongo_abelii
ENSJJAG00000021279	Rrp1b	85	63.725	ENSPCAG00000013723	RRP1B	91	63.725	Procavia_capensis
ENSJJAG00000021279	Rrp1b	100	62.516	ENSPCOG00000017927	RRP1B	100	61.730	Propithecus_coquereli
ENSJJAG00000021279	Rrp1b	99	52.442	ENSPVAG00000001436	RRP1B	99	53.153	Pteropus_vampyrus
ENSJJAG00000021279	Rrp1b	100	62.665	ENSRNOG00000001194	Rrp1b	100	61.346	Rattus_norvegicus
ENSJJAG00000021279	Rrp1b	100	57.943	ENSRBIG00000041689	RRP1B	100	57.552	Rhinopithecus_bieti
ENSJJAG00000021279	Rrp1b	100	60.417	ENSRROG00000031499	RRP1B	100	60.026	Rhinopithecus_roxellana
ENSJJAG00000021279	Rrp1b	50	48.276	ENSSBOG00000034689	RRP1	70	50.909	Saimiri_boliviensis_boliviensis
ENSJJAG00000021279	Rrp1b	94	56.574	ENSSBOG00000034727	RRP1B	99	56.308	Saimiri_boliviensis_boliviensis
ENSJJAG00000021279	Rrp1b	100	53.925	ENSSHAG00000017789	RRP1B	100	53.677	Sarcophilus_harrisii
ENSJJAG00000021279	Rrp1b	64	44.667	ENSSMAG00000016847	-	84	41.379	Scophthalmus_maximus
ENSJJAG00000021279	Rrp1b	62	50.769	ENSSDUG00000000551	-	50	49.645	Seriola_dumerili
ENSJJAG00000021279	Rrp1b	62	51.562	ENSSLDG00000002538	-	50	50.360	Seriola_lalandi_dorsalis
ENSJJAG00000021279	Rrp1b	71	55.631	ENSSARG00000003108	-	78	55.517	Sorex_araneus
ENSJJAG00000021279	Rrp1b	52	45.078	ENSSSCG00000037061	RRP1	74	48.397	Sus_scrofa
ENSJJAG00000021279	Rrp1b	100	52.756	ENSSSCG00000021698	RRP1B	100	53.543	Sus_scrofa
ENSJJAG00000021279	Rrp1b	62	50.495	ENSTNIG00000005053	rrp1	78	42.216	Tetraodon_nigroviridis
ENSJJAG00000021279	Rrp1b	91	54.933	ENSTBEG00000000422	RRP1B	97	64.198	Tupaia_belangeri
ENSJJAG00000021279	Rrp1b	100	55.322	ENSTTRG00000000723	RRP1B	100	56.110	Tursiops_truncatus
ENSJJAG00000021279	Rrp1b	100	55.232	ENSUAMG00000026765	RRP1B	100	55.614	Ursus_americanus
ENSJJAG00000021279	Rrp1b	64	73.846	ENSUMAG00000025510	RRP1B	92	63.804	Ursus_maritimus
ENSJJAG00000021279	Rrp1b	94	56.077	ENSVVUG00000024509	RRP1B	99	55.325	Vulpes_vulpes
ENSJJAG00000021279	Rrp1b	61	45.872	ENSXETG00000013683	rrp1b	66	45.872	Xenopus_tropicalis
ENSJJAG00000021279	Rrp1b	79	41.040	ENSXMAG00000023123	-	71	41.056	Xiphophorus_maculatus