EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000021710 (Gene tree)
Gene ID: 101608662
Gene Symbol: -
Alias: -
Full Name: matrin 3
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 42297 bases
Position: chrJH725444.1:1795355-1837651
Accession: 101608662
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000021313	RRM_5	PF13893.6	5.1e-07	1	2
ENSJJAP00000021313	RRM_5	PF13893.6	5.1e-07	2	2
ENSJJAP00000021311	RRM_5	PF13893.6	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000027862	-	4030	XM_004652443	ENSJJAP00000021311	846 (aa)	XP_004652500	UPI00033311F0
ENSJJAT00000027864	-	2906	XM_004652446	ENSJJAP00000021313	558 (aa)	XP_004652503	-

Gene Model

Click here to download ENSJJAG00000021710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000021710's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000021710	-	91	72.549	ENSJJAG00000011022	-	100	71.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000021710	-	100	97.639	ENSG00000015479	MATR3	100	100.000	Homo_sapiens
ENSJJAG00000021710	-	99	91.853	ENSAMEG00000011347	-	100	90.625	Ailuropoda_melanoleuca
ENSJJAG00000021710	-	100	77.535	ENSAPLG00000008118	-	100	75.439	Anas_platyrhynchos
ENSJJAG00000021710	-	99	71.638	ENSACAG00000016233	-	99	70.767	Anolis_carolinensis
ENSJJAG00000021710	-	100	97.166	ENSANAG00000022951	-	100	97.166	Aotus_nancymaae
ENSJJAG00000021710	-	76	72.516	ENSANAG00000024654	-	99	72.516	Aotus_nancymaae
ENSJJAG00000021710	-	94	30.112	ENSAMXG00000010685	matr3l1.1	84	38.095	Astyanax_mexicanus
ENSJJAG00000021710	-	71	58.929	ENSAMXG00000010681	matr3l1.1	72	58.929	Astyanax_mexicanus
ENSJJAG00000021710	-	93	91.211	ENSBTAG00000006756	MATR3	99	89.667	Bos_taurus
ENSJJAG00000021710	-	100	95.707	ENSCJAG00000006888	-	100	95.707	Callithrix_jacchus
ENSJJAG00000021710	-	100	97.173	ENSCAFG00000001345	MATR3	100	97.173	Canis_familiaris
ENSJJAG00000021710	-	99	94.131	ENSCAFG00020010504	-	98	98.470	Canis_lupus_dingo
ENSJJAG00000021710	-	100	97.527	ENSCHIG00000025746	-	100	97.527	Capra_hircus
ENSJJAG00000021710	-	100	97.639	ENSTSYG00000011028	-	100	97.639	Carlito_syrichta
ENSJJAG00000021710	-	99	97.636	ENSCPOG00000014076	-	99	97.636	Cavia_porcellus
ENSJJAG00000021710	-	100	97.403	ENSCCAG00000025074	-	100	97.403	Cebus_capucinus
ENSJJAG00000021710	-	100	96.422	ENSCATG00000041304	-	100	96.422	Cercocebus_atys
ENSJJAG00000021710	-	99	97.872	ENSCLAG00000015998	-	99	97.872	Chinchilla_lanigera
ENSJJAG00000021710	-	100	97.757	ENSCSAG00000013075	-	100	97.757	Chlorocebus_sabaeus
ENSJJAG00000021710	-	100	75.794	ENSCPBG00000006303	-	100	74.890	Chrysemys_picta_bellii
ENSJJAG00000021710	-	100	96.340	ENSCANG00000028224	-	100	96.340	Colobus_angolensis_palliatus
ENSJJAG00000021710	-	100	97.521	ENSCGRG00001020227	Matr3	100	97.521	Cricetulus_griseus_chok1gshd
ENSJJAG00000021710	-	100	97.403	ENSCGRG00000011298	Matr3	100	97.403	Cricetulus_griseus_crigri
ENSJJAG00000021710	-	97	32.143	ENSCSEG00000012682	matr3l1.1	81	32.143	Cynoglossus_semilaevis
ENSJJAG00000021710	-	79	47.692	ENSCVAG00000005337	matr3l1.1	53	47.692	Cyprinodon_variegatus
ENSJJAG00000021710	-	100	92.094	ENSDNOG00000037723	-	100	92.094	Dasypus_novemcinctus
ENSJJAG00000021710	-	100	97.527	ENSEASG00005020857	-	100	97.527	Equus_asinus_asinus
ENSJJAG00000021710	-	100	97.644	ENSECAG00000012882	MATR3	100	97.644	Equus_caballus
ENSJJAG00000021710	-	76	37.288	ENSELUG00000021651	si:ch211-271b14.1	86	37.288	Esox_lucius
ENSJJAG00000021710	-	94	30.243	ENSELUG00000021848	matr3l1.1	75	51.515	Esox_lucius
ENSJJAG00000021710	-	100	97.409	ENSFCAG00000021911	-	100	97.409	Felis_catus
ENSJJAG00000021710	-	100	75.329	ENSFALG00000003071	-	100	75.439	Ficedula_albicollis
ENSJJAG00000021710	-	100	96.812	ENSFDAG00000017675	-	100	96.812	Fukomys_damarensis
ENSJJAG00000021710	-	100	76.999	ENSGALG00000002478	MATR3	100	74.890	Gallus_gallus
ENSJJAG00000021710	-	99	75.711	ENSGAGG00000011386	-	100	74.890	Gopherus_agassizii
ENSJJAG00000021710	-	100	97.757	ENSGGOG00000007308	-	100	97.757	Gorilla_gorilla
ENSJJAG00000021710	-	100	97.993	ENSHGLG00000004673	MATR3	100	97.993	Heterocephalus_glaber_female
ENSJJAG00000021710	-	91	96.857	ENSHGLG00100006442	-	100	96.857	Heterocephalus_glaber_male
ENSJJAG00000021710	-	57	37.222	ENSHCOG00000013223	matr3l1.1	84	31.136	Hippocampus_comes
ENSJJAG00000021710	-	100	97.409	ENSSTOG00000014746	-	100	97.409	Ictidomys_tridecemlineatus
ENSJJAG00000021710	-	59	51.786	ENSLBEG00000018267	matr3l1.1	68	53.704	Labrus_bergylta
ENSJJAG00000021710	-	99	56.087	ENSLACG00000006743	-	99	57.717	Latimeria_chalumnae
ENSJJAG00000021710	-	100	96.601	ENSMFAG00000000634	-	100	96.601	Macaca_fascicularis
ENSJJAG00000021710	-	100	96.601	ENSMMUG00000016741	MATR3	100	96.601	Macaca_mulatta
ENSJJAG00000021710	-	60	97.024	ENSMMUG00000015963	-	99	97.024	Macaca_mulatta
ENSJJAG00000021710	-	100	97.875	ENSMNEG00000042856	-	100	97.875	Macaca_nemestrina
ENSJJAG00000021710	-	100	97.875	ENSMLEG00000041178	-	100	97.875	Mandrillus_leucophaeus
ENSJJAG00000021710	-	72	55.556	ENSMAMG00000013840	matr3l1.1	62	39.823	Mastacembelus_armatus
ENSJJAG00000021710	-	100	76.889	ENSMGAG00000001331	-	100	74.890	Meleagris_gallopavo
ENSJJAG00000021710	-	100	97.403	ENSMAUG00000011647	Matr3	100	97.403	Mesocricetus_auratus
ENSJJAG00000021710	-	95	95.685	ENSMICG00000012438	-	99	95.418	Microcebus_murinus
ENSJJAG00000021710	-	100	97.403	ENSMOCG00000015711	Matr3	100	97.403	Microtus_ochrogaster
ENSJJAG00000021710	-	100	90.504	ENSMODG00000011925	-	99	89.918	Monodelphis_domestica
ENSJJAG00000021710	-	100	97.403	MGP_CAROLIEiJ_G0022108	Matr3	100	97.403	Mus_caroli
ENSJJAG00000021710	-	100	97.403	ENSMUSG00000037236	Matr3	100	97.403	Mus_musculus
ENSJJAG00000021710	-	100	97.285	MGP_PahariEiJ_G0018842	Matr3	100	97.285	Mus_pahari
ENSJJAG00000021710	-	100	97.048	MGP_SPRETEiJ_G0023020	Matr3	100	97.048	Mus_spretus
ENSJJAG00000021710	-	100	94.676	ENSMPUG00000009297	-	100	95.139	Mustela_putorius_furo
ENSJJAG00000021710	-	100	96.235	ENSMLUG00000005798	-	99	96.235	Myotis_lucifugus
ENSJJAG00000021710	-	100	97.403	ENSNGAG00000017452	Matr3	100	97.403	Nannospalax_galili
ENSJJAG00000021710	-	100	97.875	ENSNLEG00000009093	-	100	97.875	Nomascus_leucogenys
ENSJJAG00000021710	-	99	89.718	ENSOPRG00000016511	-	100	88.023	Ochotona_princeps
ENSJJAG00000021710	-	99	97.518	ENSODEG00000003015	-	99	97.518	Octodon_degus
ENSJJAG00000021710	-	100	97.875	ENSOCUG00000026311	MATR3	100	97.875	Oryctolagus_cuniculus
ENSJJAG00000021710	-	58	57.407	ENSORLG00020009362	matr3l1.1	81	33.333	Oryzias_latipes_hni
ENSJJAG00000021710	-	58	59.259	ENSORLG00015018551	matr3l1.1	81	33.333	Oryzias_latipes_hsok
ENSJJAG00000021710	-	68	38.938	ENSOMEG00000022287	matr3l1.1	81	32.149	Oryzias_melastigma
ENSJJAG00000021710	-	100	98.111	ENSOGAG00000010607	-	100	98.111	Otolemur_garnettii
ENSJJAG00000021710	-	100	97.527	ENSOARG00000016931	-	99	97.527	Ovis_aries
ENSJJAG00000021710	-	100	90.519	ENSPPAG00000026720	-	99	93.053	Pan_paniscus
ENSJJAG00000021710	-	100	96.959	ENSPPAG00000001418	-	100	96.959	Pan_paniscus
ENSJJAG00000021710	-	100	97.527	ENSPPRG00000008004	-	100	97.527	Panthera_pardus
ENSJJAG00000021710	-	96	97.414	ENSPTIG00000010711	-	100	97.414	Panthera_tigris_altaica
ENSJJAG00000021710	-	100	96.959	ENSPTRG00000017294	MATR3	100	96.959	Pan_troglodytes
ENSJJAG00000021710	-	100	96.601	ENSPANG00000012018	-	100	96.601	Papio_anubis
ENSJJAG00000021710	-	99	95.324	ENSPANG00000032489	-	99	96.715	Papio_anubis
ENSJJAG00000021710	-	95	34.982	ENSPKIG00000000333	matr3l1.1	76	33.524	Paramormyrops_kingsleyae
ENSJJAG00000021710	-	99	76.206	ENSPSIG00000014598	-	100	75.439	Pelodiscus_sinensis
ENSJJAG00000021710	-	100	96.812	ENSPEMG00000020679	Matr3	100	96.812	Peromyscus_maniculatus_bairdii
ENSJJAG00000021710	-	100	92.626	ENSPPYG00000015835	-	100	92.626	Pongo_abelii
ENSJJAG00000021710	-	100	97.521	ENSPCOG00000025718	-	100	97.521	Propithecus_coquereli
ENSJJAG00000021710	-	98	92.491	ENSPVAG00000015431	-	100	92.491	Pteropus_vampyrus
ENSJJAG00000021710	-	100	97.166	ENSRNOG00000019875	Matr3	100	97.166	Rattus_norvegicus
ENSJJAG00000021710	-	100	96.601	ENSRBIG00000034713	-	100	96.601	Rhinopithecus_bieti
ENSJJAG00000021710	-	100	96.222	ENSRROG00000043949	-	100	96.222	Rhinopithecus_roxellana
ENSJJAG00000021710	-	100	96.601	ENSRROG00000039415	-	100	96.857	Rhinopithecus_roxellana
ENSJJAG00000021710	-	100	97.285	ENSSBOG00000030159	-	100	97.285	Saimiri_boliviensis_boliviensis
ENSJJAG00000021710	-	100	90.621	ENSSHAG00000010331	-	99	90.035	Sarcophilus_harrisii
ENSJJAG00000021710	-	62	55.556	ENSSDUG00000015369	matr3l1.1	59	51.471	Seriola_dumerili
ENSJJAG00000021710	-	99	74.945	ENSSPUG00000019236	-	99	73.927	Sphenodon_punctatus
ENSJJAG00000021710	-	100	97.409	ENSSSCG00000014343	-	100	97.409	Sus_scrofa
ENSJJAG00000021710	-	99	77.049	ENSTGUG00000014568	MATR3	99	75.658	Taeniopygia_guttata
ENSJJAG00000021710	-	51	37.327	ENSTRUG00000001692	-	68	35.317	Takifugu_rubripes
ENSJJAG00000021710	-	62	57.143	ENSTNIG00000003166	matr3l1.1	72	57.143	Tetraodon_nigroviridis
ENSJJAG00000021710	-	85	98.609	ENSUAMG00000000097	-	97	98.609	Ursus_americanus
ENSJJAG00000021710	-	100	96.938	ENSUMAG00000015808	-	100	96.938	Ursus_maritimus
ENSJJAG00000021710	-	100	91.769	ENSVPAG00000006337	-	100	89.433	Vicugna_pacos
ENSJJAG00000021710	-	100	97.291	ENSVVUG00000020287	-	100	97.291	Vulpes_vulpes
ENSJJAG00000021710	-	100	51.502	ENSXETG00000003838	matr3	89	58.849	Xenopus_tropicalis
ENSJJAG00000021710	-	64	58.537	ENSXMAG00000014107	-	58	31.646	Xiphophorus_maculatus