EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000022244 (Gene tree)
Gene ID: 101614783
Gene Symbol: Srbd1
Alias: D530025C17Rik
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 197965 bases
Position: chrJH725470.1:16053112-16251076
Accession: 101614783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000022090	S1	PF00575.23	5.7e-10	1	1
ENSJJAP00000022087	S1	PF00575.23	6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000028648	-	2997	-	ENSJJAP00000022087	998 (aa)	-	-
ENSJJAT00000028651	-	2907	XM_004660195	ENSJJAP00000022090	968 (aa)	XP_004660252	-

Gene Model

Click here to download ENSJJAG00000022244's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000022244's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000022244	Srbd1	100	80.642	ENSG00000068784	SRBD1	100	80.642	Homo_sapiens
ENSJJAG00000022244	Srbd1	100	50.394	ENSAPOG00000005103	si:ch211-117n7.8	99	50.541	Acanthochromis_polyacanthus
ENSJJAG00000022244	Srbd1	100	81.124	ENSAMEG00000005993	SRBD1	100	81.124	Ailuropoda_melanoleuca
ENSJJAG00000022244	Srbd1	94	50.938	ENSACIG00000009875	si:ch211-117n7.8	98	50.304	Amphilophus_citrinellus
ENSJJAG00000022244	Srbd1	99	50.000	ENSAOCG00000024718	si:ch211-117n7.8	99	50.000	Amphiprion_ocellaris
ENSJJAG00000022244	Srbd1	97	51.081	ENSAPEG00000002645	si:ch211-117n7.8	99	51.081	Amphiprion_percula
ENSJJAG00000022244	Srbd1	99	49.214	ENSATEG00000010844	si:ch211-117n7.8	99	49.656	Anabas_testudineus
ENSJJAG00000022244	Srbd1	100	67.467	ENSAPLG00000006313	SRBD1	100	67.668	Anas_platyrhynchos
ENSJJAG00000022244	Srbd1	100	80.843	ENSANAG00000025573	SRBD1	100	80.843	Aotus_nancymaae
ENSJJAG00000022244	Srbd1	100	49.084	ENSACLG00000024219	si:ch211-117n7.8	99	49.180	Astatotilapia_calliptera
ENSJJAG00000022244	Srbd1	86	58.148	ENSAMXG00000004294	SRBD1	93	54.869	Astyanax_mexicanus
ENSJJAG00000022244	Srbd1	100	79.459	ENSBTAG00000007508	SRBD1	97	79.760	Bos_taurus
ENSJJAG00000022244	Srbd1	100	79.940	ENSCJAG00000000727	SRBD1	100	79.940	Callithrix_jacchus
ENSJJAG00000022244	Srbd1	100	80.681	ENSCAFG00000002554	SRBD1	100	80.681	Canis_familiaris
ENSJJAG00000022244	Srbd1	100	77.756	ENSCAFG00020026284	SRBD1	99	82.573	Canis_lupus_dingo
ENSJJAG00000022244	Srbd1	100	79.760	ENSCHIG00000016535	SRBD1	98	80.060	Capra_hircus
ENSJJAG00000022244	Srbd1	100	81.100	ENSTSYG00000012797	SRBD1	100	81.100	Carlito_syrichta
ENSJJAG00000022244	Srbd1	100	80.285	ENSCPOG00000004773	SRBD1	100	80.285	Cavia_porcellus
ENSJJAG00000022244	Srbd1	100	81.143	ENSCCAG00000025589	SRBD1	100	81.143	Cebus_capucinus
ENSJJAG00000022244	Srbd1	100	81.043	ENSCATG00000039530	SRBD1	100	81.043	Cercocebus_atys
ENSJJAG00000022244	Srbd1	100	81.864	ENSCLAG00000008623	SRBD1	100	81.864	Chinchilla_lanigera
ENSJJAG00000022244	Srbd1	100	81.444	ENSCSAG00000013350	SRBD1	100	81.444	Chlorocebus_sabaeus
ENSJJAG00000022244	Srbd1	81	88.535	ENSCHOG00000003805	SRBD1	80	88.535	Choloepus_hoffmanni
ENSJJAG00000022244	Srbd1	100	68.924	ENSCPBG00000005677	SRBD1	100	69.591	Chrysemys_picta_bellii
ENSJJAG00000022244	Srbd1	79	43.095	ENSCING00000005950	-	99	43.095	Ciona_intestinalis
ENSJJAG00000022244	Srbd1	79	42.930	ENSCSAVG00000000861	-	99	42.930	Ciona_savignyi
ENSJJAG00000022244	Srbd1	99	80.704	ENSCANG00000016307	SRBD1	99	80.704	Colobus_angolensis_palliatus
ENSJJAG00000022244	Srbd1	100	81.054	ENSCGRG00001000513	Srbd1	100	81.054	Cricetulus_griseus_chok1gshd
ENSJJAG00000022244	Srbd1	100	81.054	ENSCGRG00000002283	Srbd1	100	81.054	Cricetulus_griseus_crigri
ENSJJAG00000022244	Srbd1	83	54.374	ENSCSEG00000000856	si:ch211-117n7.8	84	54.374	Cynoglossus_semilaevis
ENSJJAG00000022244	Srbd1	83	54.869	ENSCVAG00000020212	si:ch211-117n7.8	89	54.869	Cyprinodon_variegatus
ENSJJAG00000022244	Srbd1	100	79.920	ENSDNOG00000018686	SRBD1	100	79.920	Dasypus_novemcinctus
ENSJJAG00000022244	Srbd1	100	80.488	ENSDORG00000010468	Srbd1	100	80.488	Dipodomys_ordii
ENSJJAG00000022244	Srbd1	93	35.132	FBgn0051156	CG31156	99	35.132	Drosophila_melanogaster
ENSJJAG00000022244	Srbd1	90	81.159	ENSETEG00000000739	SRBD1	92	81.159	Echinops_telfairi
ENSJJAG00000022244	Srbd1	73	46.914	ENSEBUG00000008902	si:ch211-117n7.8	96	46.914	Eptatretus_burgeri
ENSJJAG00000022244	Srbd1	100	78.257	ENSEASG00005003132	SRBD1	97	88.535	Equus_asinus_asinus
ENSJJAG00000022244	Srbd1	100	81.162	ENSECAG00000013865	SRBD1	98	81.162	Equus_caballus
ENSJJAG00000022244	Srbd1	95	53.671	ENSELUG00000012592	si:ch211-117n7.8	93	53.641	Esox_lucius
ENSJJAG00000022244	Srbd1	100	81.663	ENSFCAG00000005101	SRBD1	100	81.663	Felis_catus
ENSJJAG00000022244	Srbd1	100	65.729	ENSFALG00000012966	SRBD1	100	65.729	Ficedula_albicollis
ENSJJAG00000022244	Srbd1	97	80.878	ENSFDAG00000016670	SRBD1	98	80.878	Fukomys_damarensis
ENSJJAG00000022244	Srbd1	95	52.017	ENSFHEG00000019480	si:ch211-117n7.8	93	52.017	Fundulus_heteroclitus
ENSJJAG00000022244	Srbd1	100	65.829	ENSGALG00000009990	SRBD1	100	67.101	Gallus_gallus
ENSJJAG00000022244	Srbd1	98	49.950	ENSGAFG00000019664	si:ch211-117n7.8	98	50.701	Gambusia_affinis
ENSJJAG00000022244	Srbd1	62	57.600	ENSGACG00000010794	si:ch211-117n7.8	100	57.920	Gasterosteus_aculeatus
ENSJJAG00000022244	Srbd1	89	71.617	ENSGAGG00000006166	SRBD1	99	76.287	Gopherus_agassizii
ENSJJAG00000022244	Srbd1	97	81.031	ENSGGOG00000005910	SRBD1	100	81.031	Gorilla_gorilla
ENSJJAG00000022244	Srbd1	95	47.701	ENSHBUG00000013207	si:ch211-117n7.8	99	46.974	Haplochromis_burtoni
ENSJJAG00000022244	Srbd1	99	81.976	ENSHGLG00000018153	-	99	81.976	Heterocephalus_glaber_female
ENSJJAG00000022244	Srbd1	99	81.772	ENSHGLG00100015183	-	99	81.772	Heterocephalus_glaber_male
ENSJJAG00000022244	Srbd1	96	53.927	ENSIPUG00000009661	srbd1	97	53.043	Ictalurus_punctatus
ENSJJAG00000022244	Srbd1	100	82.520	ENSSTOG00000005898	SRBD1	100	82.520	Ictidomys_tridecemlineatus
ENSJJAG00000022244	Srbd1	97	50.504	ENSKMAG00000003473	si:ch211-117n7.8	97	50.504	Kryptolebias_marmoratus
ENSJJAG00000022244	Srbd1	97	50.402	ENSLBEG00000027518	si:ch211-117n7.8	97	50.402	Labrus_bergylta
ENSJJAG00000022244	Srbd1	85	67.494	ENSLACG00000009790	SRBD1	99	67.494	Latimeria_chalumnae
ENSJJAG00000022244	Srbd1	95	58.501	ENSLOCG00000016360	si:ch211-117n7.8	99	56.647	Lepisosteus_oculatus
ENSJJAG00000022244	Srbd1	100	81.244	ENSMFAG00000042026	SRBD1	100	81.244	Macaca_fascicularis
ENSJJAG00000022244	Srbd1	100	80.943	ENSMMUG00000003490	SRBD1	100	80.943	Macaca_mulatta
ENSJJAG00000022244	Srbd1	100	78.636	ENSMNEG00000034701	SRBD1	100	78.636	Macaca_nemestrina
ENSJJAG00000022244	Srbd1	100	81.043	ENSMLEG00000000745	SRBD1	100	81.043	Mandrillus_leucophaeus
ENSJJAG00000022244	Srbd1	99	47.843	ENSMAMG00000021921	si:ch211-117n7.8	99	49.051	Mastacembelus_armatus
ENSJJAG00000022244	Srbd1	100	49.084	ENSMZEG00005027369	si:ch211-117n7.8	99	49.373	Maylandia_zebra
ENSJJAG00000022244	Srbd1	80	71.500	ENSMGAG00000010273	SRBD1	100	71.500	Meleagris_gallopavo
ENSJJAG00000022244	Srbd1	79	83.436	ENSMAUG00000013916	Srbd1	95	83.436	Mesocricetus_auratus
ENSJJAG00000022244	Srbd1	100	81.244	ENSMICG00000007835	SRBD1	100	81.244	Microcebus_murinus
ENSJJAG00000022244	Srbd1	100	80.344	ENSMOCG00000018716	Srbd1	100	80.344	Microtus_ochrogaster
ENSJJAG00000022244	Srbd1	97	49.192	ENSMMOG00000007507	si:ch211-117n7.8	99	49.192	Mola_mola
ENSJJAG00000022244	Srbd1	99	49.220	ENSMALG00000001562	si:ch211-117n7.8	99	49.220	Monopterus_albus
ENSJJAG00000022244	Srbd1	100	78.905	MGP_CAROLIEiJ_G0021934	Srbd1	99	86.275	Mus_caroli
ENSJJAG00000022244	Srbd1	100	79.209	ENSMUSG00000024135	Srbd1	99	84.694	Mus_musculus
ENSJJAG00000022244	Srbd1	100	78.803	MGP_PahariEiJ_G0020924	Srbd1	100	78.803	Mus_pahari
ENSJJAG00000022244	Srbd1	100	79.310	MGP_SPRETEiJ_G0022850	Srbd1	100	79.310	Mus_spretus
ENSJJAG00000022244	Srbd1	100	78.156	ENSMLUG00000007039	SRBD1	100	78.156	Myotis_lucifugus
ENSJJAG00000022244	Srbd1	100	80.826	ENSNGAG00000011893	Srbd1	100	80.826	Nannospalax_galili
ENSJJAG00000022244	Srbd1	94	50.745	ENSNBRG00000012873	si:ch211-117n7.8	99	49.391	Neolamprologus_brichardi
ENSJJAG00000022244	Srbd1	100	80.542	ENSNLEG00000016877	SRBD1	100	80.542	Nomascus_leucogenys
ENSJJAG00000022244	Srbd1	100	79.370	ENSODEG00000012095	SRBD1	100	79.370	Octodon_degus
ENSJJAG00000022244	Srbd1	100	49.033	ENSONIG00000000945	si:ch211-117n7.8	99	55.529	Oreochromis_niloticus
ENSJJAG00000022244	Srbd1	100	81.269	ENSOCUG00000015385	SRBD1	100	81.672	Oryctolagus_cuniculus
ENSJJAG00000022244	Srbd1	99	46.311	ENSORLG00000004427	si:ch211-117n7.8	99	46.311	Oryzias_latipes
ENSJJAG00000022244	Srbd1	97	49.600	ENSORLG00020012792	si:ch211-117n7.8	97	49.850	Oryzias_latipes_hni
ENSJJAG00000022244	Srbd1	97	49.800	ENSORLG00015018598	si:ch211-117n7.8	97	49.800	Oryzias_latipes_hsok
ENSJJAG00000022244	Srbd1	98	49.043	ENSOMEG00000012229	si:ch211-117n7.8	95	55.109	Oryzias_melastigma
ENSJJAG00000022244	Srbd1	100	76.353	ENSOGAG00000001076	SRBD1	100	76.353	Otolemur_garnettii
ENSJJAG00000022244	Srbd1	100	76.112	ENSOARG00000005958	SRBD1	100	76.692	Ovis_aries
ENSJJAG00000022244	Srbd1	100	80.742	ENSPPAG00000038442	SRBD1	100	80.742	Pan_paniscus
ENSJJAG00000022244	Srbd1	100	81.645	ENSPPRG00000003449	SRBD1	100	81.645	Panthera_pardus
ENSJJAG00000022244	Srbd1	100	81.745	ENSPTIG00000012495	SRBD1	100	81.745	Panthera_tigris_altaica
ENSJJAG00000022244	Srbd1	100	80.742	ENSPTRG00000011889	SRBD1	100	80.742	Pan_troglodytes
ENSJJAG00000022244	Srbd1	100	80.943	ENSPANG00000008063	SRBD1	100	80.943	Papio_anubis
ENSJJAG00000022244	Srbd1	96	52.804	ENSPKIG00000021973	si:ch211-117n7.8	99	52.053	Paramormyrops_kingsleyae
ENSJJAG00000022244	Srbd1	100	69.770	ENSPSIG00000008992	SRBD1	100	70.170	Pelodiscus_sinensis
ENSJJAG00000022244	Srbd1	80	54.591	ENSPMGG00000013348	si:ch211-117n7.8	99	49.340	Periophthalmus_magnuspinnatus
ENSJJAG00000022244	Srbd1	100	79.406	ENSPEMG00000020684	Srbd1	100	79.406	Peromyscus_maniculatus_bairdii
ENSJJAG00000022244	Srbd1	98	50.645	ENSPFOG00000010650	si:ch211-117n7.8	98	50.645	Poecilia_formosa
ENSJJAG00000022244	Srbd1	98	50.396	ENSPLAG00000002141	si:ch211-117n7.8	98	50.396	Poecilia_latipinna
ENSJJAG00000022244	Srbd1	98	50.148	ENSPMEG00000018537	si:ch211-117n7.8	98	50.148	Poecilia_mexicana
ENSJJAG00000022244	Srbd1	98	50.349	ENSPREG00000003258	si:ch211-117n7.8	98	50.349	Poecilia_reticulata
ENSJJAG00000022244	Srbd1	100	74.386	ENSPPYG00000012444	SRBD1	99	74.386	Pongo_abelii
ENSJJAG00000022244	Srbd1	82	75.033	ENSPCAG00000005629	SRBD1	86	75.033	Procavia_capensis
ENSJJAG00000022244	Srbd1	100	73.374	ENSPCOG00000017669	SRBD1	100	73.374	Propithecus_coquereli
ENSJJAG00000022244	Srbd1	94	85.942	ENSPVAG00000001782	SRBD1	97	85.942	Pteropus_vampyrus
ENSJJAG00000022244	Srbd1	95	48.729	ENSPNYG00000000508	si:ch211-117n7.8	99	48.118	Pundamilia_nyererei
ENSJJAG00000022244	Srbd1	95	55.308	ENSPNAG00000013492	SRBD1	98	54.433	Pygocentrus_nattereri
ENSJJAG00000022244	Srbd1	100	77.992	ENSRNOG00000014720	Srbd1	99	78.622	Rattus_norvegicus
ENSJJAG00000022244	Srbd1	99	80.704	ENSRBIG00000033486	SRBD1	99	80.704	Rhinopithecus_bieti
ENSJJAG00000022244	Srbd1	99	80.704	ENSRROG00000041599	SRBD1	99	80.704	Rhinopithecus_roxellana
ENSJJAG00000022244	Srbd1	100	80.642	ENSSBOG00000024982	SRBD1	100	80.642	Saimiri_boliviensis_boliviensis
ENSJJAG00000022244	Srbd1	94	54.478	ENSSFOG00015001128	si:ch211-117n7.8	99	54.478	Scleropages_formosus
ENSJJAG00000022244	Srbd1	99	48.350	ENSSMAG00000018256	si:ch211-117n7.8	99	48.350	Scophthalmus_maximus
ENSJJAG00000022244	Srbd1	83	54.147	ENSSLDG00000023189	si:ch211-117n7.8	97	48.837	Seriola_lalandi_dorsalis
ENSJJAG00000022244	Srbd1	100	72.589	ENSSARG00000009740	SRBD1	100	72.589	Sorex_araneus
ENSJJAG00000022244	Srbd1	88	71.544	ENSSPUG00000010475	SRBD1	100	67.653	Sphenodon_punctatus
ENSJJAG00000022244	Srbd1	95	49.895	ENSSPAG00000008092	-	99	49.100	Stegastes_partitus
ENSJJAG00000022244	Srbd1	100	81.062	ENSSSCG00000008445	SRBD1	98	81.363	Sus_scrofa
ENSJJAG00000022244	Srbd1	83	73.678	ENSTGUG00000003878	SRBD1	100	73.678	Taeniopygia_guttata
ENSJJAG00000022244	Srbd1	99	49.179	ENSTRUG00000007080	si:ch211-117n7.8	99	49.324	Takifugu_rubripes
ENSJJAG00000022244	Srbd1	99	48.109	ENSTNIG00000007464	si:ch211-117n7.8	99	48.109	Tetraodon_nigroviridis
ENSJJAG00000022244	Srbd1	81	98.936	ENSTBEG00000004556	SRBD1	82	98.936	Tupaia_belangeri
ENSJJAG00000022244	Srbd1	94	82.949	ENSTTRG00000011871	SRBD1	94	82.949	Tursiops_truncatus
ENSJJAG00000022244	Srbd1	100	80.862	ENSUAMG00000008126	SRBD1	97	85.145	Ursus_americanus
ENSJJAG00000022244	Srbd1	100	80.962	ENSUMAG00000012902	SRBD1	98	80.962	Ursus_maritimus
ENSJJAG00000022244	Srbd1	91	82.288	ENSVPAG00000006825	SRBD1	100	82.288	Vicugna_pacos
ENSJJAG00000022244	Srbd1	100	80.261	ENSVVUG00000005389	SRBD1	100	80.762	Vulpes_vulpes
ENSJJAG00000022244	Srbd1	100	50.583	ENSXETG00000002760	srbd1	100	50.289	Xenopus_tropicalis
ENSJJAG00000022244	Srbd1	98	49.850	ENSXMAG00000016861	si:ch211-117n7.8	98	49.850	Xiphophorus_maculatus