EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000022342 (Gene tree)
Gene ID: 101602798
Gene Symbol: Smarcad1
Alias: D6Pas1|Etl1
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 104752 bases
Position: chrJH725463.1:12319188-12423939
Accession: 101602798
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000022222	ResIII	PF04851.15	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000028786	-	4837	XM_004658560	ENSJJAP00000022222	1026 (aa)	XP_004658617	UPI000332F0D9

Gene Model

Click here to download ENSJJAG00000022342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000022342's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000022342	Smarcad1	51	37.982	ENSJJAG00000000865	Hells	70	37.798

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000022342	Smarcad1	100	96.101	ENSG00000163104	SMARCAD1	100	98.322	Homo_sapiens
ENSJJAG00000022342	Smarcad1	98	61.723	ENSAPOG00000011446	smarcad1a	96	61.474	Acanthochromis_polyacanthus
ENSJJAG00000022342	Smarcad1	100	95.233	ENSAMEG00000005844	SMARCAD1	100	95.233	Ailuropoda_melanoleuca
ENSJJAG00000022342	Smarcad1	67	68.480	ENSACIG00000018326	smarcad1a	99	68.480	Amphilophus_citrinellus
ENSJJAG00000022342	Smarcad1	100	61.723	ENSAOCG00000019762	smarcad1a	99	60.899	Amphiprion_ocellaris
ENSJJAG00000022342	Smarcad1	100	61.864	ENSAPEG00000003889	smarcad1a	96	61.613	Amphiprion_percula
ENSJJAG00000022342	Smarcad1	84	62.640	ENSATEG00000015608	smarcad1a	90	62.640	Anabas_testudineus
ENSJJAG00000022342	Smarcad1	94	72.680	ENSAPLG00000004630	SMARCAD1	100	72.784	Anas_platyrhynchos
ENSJJAG00000022342	Smarcad1	100	69.797	ENSACAG00000013554	SMARCAD1	100	70.223	Anolis_carolinensis
ENSJJAG00000022342	Smarcad1	100	95.623	ENSANAG00000020488	SMARCAD1	100	95.623	Aotus_nancymaae
ENSJJAG00000022342	Smarcad1	92	66.303	ENSACLG00000017063	smarcad1a	100	49.954	Astatotilapia_calliptera
ENSJJAG00000022342	Smarcad1	69	60.784	ENSAMXG00000015470	smarcad1a	98	60.784	Astyanax_mexicanus
ENSJJAG00000022342	Smarcad1	77	58.867	ENSAMXG00000019130	smarcad1b	85	59.774	Astyanax_mexicanus
ENSJJAG00000022342	Smarcad1	100	94.072	ENSBTAG00000017061	SMARCAD1	100	94.072	Bos_taurus
ENSJJAG00000022342	Smarcad1	59	43.954	WBGene00010845	M03C11.8	63	42.857	Caenorhabditis_elegans
ENSJJAG00000022342	Smarcad1	100	95.906	ENSCJAG00000006778	SMARCAD1	100	95.906	Callithrix_jacchus
ENSJJAG00000022342	Smarcad1	100	95.136	ENSCAFG00000010026	SMARCAD1	100	95.136	Canis_familiaris
ENSJJAG00000022342	Smarcad1	87	96.171	ENSCAFG00020003994	SMARCAD1	99	96.171	Canis_lupus_dingo
ENSJJAG00000022342	Smarcad1	100	94.553	ENSCHIG00000012905	SMARCAD1	100	94.553	Capra_hircus
ENSJJAG00000022342	Smarcad1	100	95.521	ENSTSYG00000002706	SMARCAD1	100	95.521	Carlito_syrichta
ENSJJAG00000022342	Smarcad1	90	77.253	ENSCAPG00000016744	SMARCAD1	96	78.017	Cavia_aperea
ENSJJAG00000022342	Smarcad1	100	93.411	ENSCPOG00000011398	SMARCAD1	100	93.411	Cavia_porcellus
ENSJJAG00000022342	Smarcad1	100	95.809	ENSCCAG00000022264	SMARCAD1	100	98.322	Cebus_capucinus
ENSJJAG00000022342	Smarcad1	100	95.712	ENSCATG00000035663	SMARCAD1	100	96.513	Cercocebus_atys
ENSJJAG00000022342	Smarcad1	82	96.786	ENSCSAG00000004186	SMARCAD1	100	96.786	Chlorocebus_sabaeus
ENSJJAG00000022342	Smarcad1	100	72.849	ENSCPBG00000013203	SMARCAD1	100	73.583	Chrysemys_picta_bellii
ENSJJAG00000022342	Smarcad1	64	49.850	ENSCING00000001688	-	99	49.850	Ciona_intestinalis
ENSJJAG00000022342	Smarcad1	100	95.614	ENSCANG00000003556	SMARCAD1	100	98.322	Colobus_angolensis_palliatus
ENSJJAG00000022342	Smarcad1	100	93.762	ENSCGRG00001015056	Smarcad1	100	93.762	Cricetulus_griseus_chok1gshd
ENSJJAG00000022342	Smarcad1	100	93.762	ENSCGRG00000014087	Smarcad1	100	93.762	Cricetulus_griseus_crigri
ENSJJAG00000022342	Smarcad1	94	62.054	ENSCSEG00000014419	-	91	58.904	Cynoglossus_semilaevis
ENSJJAG00000022342	Smarcad1	96	62.946	ENSCSEG00000017903	smarcad1a	100	46.856	Cynoglossus_semilaevis
ENSJJAG00000022342	Smarcad1	85	54.626	ENSDARG00000014041	smarcad1a	92	55.252	Danio_rerio
ENSJJAG00000022342	Smarcad1	78	58.220	ENSDARG00000073721	smarcad1b	82	59.439	Danio_rerio
ENSJJAG00000022342	Smarcad1	100	94.250	ENSDNOG00000000806	-	100	94.250	Dasypus_novemcinctus
ENSJJAG00000022342	Smarcad1	100	91.642	ENSDORG00000012331	Smarcad1	100	91.642	Dipodomys_ordii
ENSJJAG00000022342	Smarcad1	63	45.538	FBgn0032157	Etl1	90	40.074	Drosophila_melanogaster
ENSJJAG00000022342	Smarcad1	61	46.022	ENSEBUG00000003969	smarcad1a	96	46.191	Eptatretus_burgeri
ENSJJAG00000022342	Smarcad1	100	94.844	ENSEASG00005012382	SMARCAD1	100	94.844	Equus_asinus_asinus
ENSJJAG00000022342	Smarcad1	100	94.844	ENSECAG00000011562	SMARCAD1	100	94.844	Equus_caballus
ENSJJAG00000022342	Smarcad1	79	57.005	ENSELUG00000019154	smarcad1b	79	59.207	Esox_lucius
ENSJJAG00000022342	Smarcad1	100	51.066	ENSELUG00000018535	smarcad1a	100	50.882	Esox_lucius
ENSJJAG00000022342	Smarcad1	100	94.450	ENSFCAG00000003958	SMARCAD1	100	97.819	Felis_catus
ENSJJAG00000022342	Smarcad1	100	67.823	ENSFALG00000006089	SMARCAD1	100	67.630	Ficedula_albicollis
ENSJJAG00000022342	Smarcad1	100	94.834	ENSFDAG00000017027	SMARCAD1	100	94.834	Fukomys_damarensis
ENSJJAG00000022342	Smarcad1	97	65.321	ENSFHEG00000012778	smarcad1a	100	61.423	Fundulus_heteroclitus
ENSJJAG00000022342	Smarcad1	84	57.373	ENSGMOG00000018995	smarcad1a	97	56.995	Gadus_morhua
ENSJJAG00000022342	Smarcad1	79	72.107	ENSGALG00000037339	SMARCAD1	94	74.202	Gallus_gallus
ENSJJAG00000022342	Smarcad1	62	66.193	ENSGAFG00000013498	smarcad1a	60	66.193	Gambusia_affinis
ENSJJAG00000022342	Smarcad1	86	57.883	ENSGACG00000007327	smarcad1a	99	57.883	Gasterosteus_aculeatus
ENSJJAG00000022342	Smarcad1	100	73.077	ENSGAGG00000008582	SMARCAD1	100	73.456	Gopherus_agassizii
ENSJJAG00000022342	Smarcad1	100	96.101	ENSGGOG00000023001	SMARCAD1	100	96.101	Gorilla_gorilla
ENSJJAG00000022342	Smarcad1	62	66.147	ENSHBUG00000011042	smarcad1a	70	59.787	Haplochromis_burtoni
ENSJJAG00000022342	Smarcad1	100	94.752	ENSHGLG00000005070	SMARCAD1	100	94.752	Heterocephalus_glaber_female
ENSJJAG00000022342	Smarcad1	100	94.752	ENSHGLG00100006812	SMARCAD1	100	94.752	Heterocephalus_glaber_male
ENSJJAG00000022342	Smarcad1	85	63.608	ENSHCOG00000007848	smarcad1a	91	59.583	Hippocampus_comes
ENSJJAG00000022342	Smarcad1	76	64.789	ENSIPUG00000000242	smarcad1a	95	60.278	Ictalurus_punctatus
ENSJJAG00000022342	Smarcad1	81	57.279	ENSIPUG00000022817	smarcad1b	89	57.656	Ictalurus_punctatus
ENSJJAG00000022342	Smarcad1	100	96.008	ENSSTOG00000001227	SMARCAD1	100	96.008	Ictidomys_tridecemlineatus
ENSJJAG00000022342	Smarcad1	64	63.897	ENSKMAG00000021351	smarcad1a	66	60.364	Kryptolebias_marmoratus
ENSJJAG00000022342	Smarcad1	65	65.821	ENSLBEG00000008088	smarcad1a	69	62.158	Labrus_bergylta
ENSJJAG00000022342	Smarcad1	100	54.677	ENSLOCG00000012909	smarcad1a	100	55.342	Lepisosteus_oculatus
ENSJJAG00000022342	Smarcad1	100	92.398	ENSLAFG00000000040	SMARCAD1	100	92.398	Loxodonta_africana
ENSJJAG00000022342	Smarcad1	100	95.614	ENSMFAG00000042606	SMARCAD1	100	96.288	Macaca_fascicularis
ENSJJAG00000022342	Smarcad1	87	96.288	ENSMMUG00000022242	SMARCAD1	100	96.288	Macaca_mulatta
ENSJJAG00000022342	Smarcad1	100	95.517	ENSMNEG00000038117	SMARCAD1	100	98.154	Macaca_nemestrina
ENSJJAG00000022342	Smarcad1	100	95.712	ENSMLEG00000038333	SMARCAD1	100	98.322	Mandrillus_leucophaeus
ENSJJAG00000022342	Smarcad1	99	62.656	ENSMAMG00000000933	smarcad1a	94	62.277	Mastacembelus_armatus
ENSJJAG00000022342	Smarcad1	92	66.303	ENSMZEG00005005203	smarcad1a	100	49.954	Maylandia_zebra
ENSJJAG00000022342	Smarcad1	94	63.889	ENSMGAG00000005577	SMARCAD1	100	63.889	Meleagris_gallopavo
ENSJJAG00000022342	Smarcad1	100	93.762	ENSMAUG00000008417	Smarcad1	100	93.762	Mesocricetus_auratus
ENSJJAG00000022342	Smarcad1	100	94.752	ENSMICG00000009746	SMARCAD1	100	94.752	Microcebus_murinus
ENSJJAG00000022342	Smarcad1	100	93.372	ENSMOCG00000017142	Smarcad1	100	93.372	Microtus_ochrogaster
ENSJJAG00000022342	Smarcad1	77	57.980	ENSMMOG00000000275	smarcad1a	97	58.354	Mola_mola
ENSJJAG00000022342	Smarcad1	100	80.985	ENSMODG00000019268	SMARCAD1	100	80.985	Monodelphis_domestica
ENSJJAG00000022342	Smarcad1	95	93.979	MGP_CAROLIEiJ_G0028458	-	77	93.979	Mus_caroli
ENSJJAG00000022342	Smarcad1	100	92.600	ENSMUSG00000029920	Smarcad1	100	92.600	Mus_musculus
ENSJJAG00000022342	Smarcad1	100	93.087	MGP_PahariEiJ_G0022198	Smarcad1	100	93.087	Mus_pahari
ENSJJAG00000022342	Smarcad1	100	92.697	MGP_SPRETEiJ_G0029462	Smarcad1	100	92.697	Mus_spretus
ENSJJAG00000022342	Smarcad1	100	95.039	ENSMPUG00000002111	SMARCAD1	100	95.039	Mustela_putorius_furo
ENSJJAG00000022342	Smarcad1	100	91.634	ENSMLUG00000000425	SMARCAD1	100	91.634	Myotis_lucifugus
ENSJJAG00000022342	Smarcad1	100	93.957	ENSNGAG00000000810	Smarcad1	100	93.957	Nannospalax_galili
ENSJJAG00000022342	Smarcad1	61	66.346	ENSNBRG00000012749	smarcad1a	87	60.109	Neolamprologus_brichardi
ENSJJAG00000022342	Smarcad1	100	96.101	ENSNLEG00000014225	SMARCAD1	100	98.322	Nomascus_leucogenys
ENSJJAG00000022342	Smarcad1	100	93.975	ENSODEG00000004334	SMARCAD1	100	93.975	Octodon_degus
ENSJJAG00000022342	Smarcad1	63	65.741	ENSONIG00000015059	smarcad1a	100	52.220	Oreochromis_niloticus
ENSJJAG00000022342	Smarcad1	80	83.937	ENSOANG00000013764	SMARCAD1	100	83.937	Ornithorhynchus_anatinus
ENSJJAG00000022342	Smarcad1	100	95.419	ENSOCUG00000017283	SMARCAD1	100	95.419	Oryctolagus_cuniculus
ENSJJAG00000022342	Smarcad1	65	64.910	ENSORLG00000004869	smarcad1a	68	60.888	Oryzias_latipes
ENSJJAG00000022342	Smarcad1	65	64.910	ENSORLG00020020569	smarcad1a	71	59.225	Oryzias_latipes_hni
ENSJJAG00000022342	Smarcad1	65	64.759	ENSORLG00015009045	smarcad1a	100	47.500	Oryzias_latipes_hsok
ENSJJAG00000022342	Smarcad1	65	64.662	ENSOMEG00000023032	smarcad1a	69	61.202	Oryzias_melastigma
ENSJJAG00000022342	Smarcad1	100	94.363	ENSOGAG00000011444	SMARCAD1	100	94.363	Otolemur_garnettii
ENSJJAG00000022342	Smarcad1	100	94.455	ENSOARG00000017851	SMARCAD1	100	94.455	Ovis_aries
ENSJJAG00000022342	Smarcad1	100	96.199	ENSPPAG00000035715	SMARCAD1	100	96.199	Pan_paniscus
ENSJJAG00000022342	Smarcad1	100	94.547	ENSPPRG00000024756	SMARCAD1	100	97.819	Panthera_pardus
ENSJJAG00000022342	Smarcad1	100	94.363	ENSPTIG00000017868	SMARCAD1	100	94.363	Panthera_tigris_altaica
ENSJJAG00000022342	Smarcad1	100	96.101	ENSPTRG00000023126	SMARCAD1	100	98.322	Pan_troglodytes
ENSJJAG00000022342	Smarcad1	100	94.558	ENSPANG00000019757	SMARCAD1	100	94.558	Papio_anubis
ENSJJAG00000022342	Smarcad1	100	72.632	ENSPSIG00000010255	SMARCAD1	100	72.727	Pelodiscus_sinensis
ENSJJAG00000022342	Smarcad1	62	64.386	ENSPMGG00000010735	smarcad1a	95	62.870	Periophthalmus_magnuspinnatus
ENSJJAG00000022342	Smarcad1	100	78.558	ENSPEMG00000001854	Smarcad1	100	78.850	Peromyscus_maniculatus_bairdii
ENSJJAG00000022342	Smarcad1	99	46.958	ENSPMAG00000003516	smarcad1a	99	47.053	Petromyzon_marinus
ENSJJAG00000022342	Smarcad1	77	87.358	ENSPCIG00000008137	SMARCAD1	98	88.736	Phascolarctos_cinereus
ENSJJAG00000022342	Smarcad1	94	66.147	ENSPFOG00000019116	smarcad1a	90	60.858	Poecilia_formosa
ENSJJAG00000022342	Smarcad1	62	65.991	ENSPLAG00000000108	smarcad1a	66	60.719	Poecilia_latipinna
ENSJJAG00000022342	Smarcad1	94	66.147	ENSPMEG00000009155	smarcad1a	90	60.858	Poecilia_mexicana
ENSJJAG00000022342	Smarcad1	95	66.615	ENSPREG00000018185	smarcad1a	100	61.019	Poecilia_reticulata
ENSJJAG00000022342	Smarcad1	100	95.428	ENSPPYG00000014935	SMARCAD1	100	95.428	Pongo_abelii
ENSJJAG00000022342	Smarcad1	72	96.066	ENSPCOG00000020478	SMARCAD1	89	96.066	Propithecus_coquereli
ENSJJAG00000022342	Smarcad1	100	93.003	ENSPVAG00000001760	SMARCAD1	100	93.003	Pteropus_vampyrus
ENSJJAG00000022342	Smarcad1	61	65.865	ENSPNYG00000010087	smarcad1a	87	59.041	Pundamilia_nyererei
ENSJJAG00000022342	Smarcad1	100	51.082	ENSPNAG00000001663	smarcad1a	100	50.894	Pygocentrus_nattereri
ENSJJAG00000022342	Smarcad1	79	57.990	ENSPNAG00000010099	smarcad1b	84	59.521	Pygocentrus_nattereri
ENSJJAG00000022342	Smarcad1	100	93.379	ENSRNOG00000006391	Smarcad1	100	93.379	Rattus_norvegicus
ENSJJAG00000022342	Smarcad1	100	95.712	ENSRBIG00000041989	SMARCAD1	100	95.712	Rhinopithecus_bieti
ENSJJAG00000022342	Smarcad1	100	95.712	ENSRROG00000035309	SMARCAD1	100	95.712	Rhinopithecus_roxellana
ENSJJAG00000022342	Smarcad1	100	95.809	ENSSBOG00000032114	SMARCAD1	100	98.322	Saimiri_boliviensis_boliviensis
ENSJJAG00000022342	Smarcad1	100	81.853	ENSSHAG00000001279	SMARCAD1	100	81.950	Sarcophilus_harrisii
ENSJJAG00000022342	Smarcad1	74	57.977	ENSSFOG00015020909	smarcad1a	100	57.847	Scleropages_formosus
ENSJJAG00000022342	Smarcad1	100	50.743	ENSSFOG00015016814	smarcad1b	100	51.020	Scleropages_formosus
ENSJJAG00000022342	Smarcad1	65	66.024	ENSSMAG00000001326	smarcad1a	67	62.791	Scophthalmus_maximus
ENSJJAG00000022342	Smarcad1	62	66.459	ENSSDUG00000022338	smarcad1a	84	61.785	Seriola_dumerili
ENSJJAG00000022342	Smarcad1	92	66.147	ENSSLDG00000024986	smarcad1a	96	61.506	Seriola_lalandi_dorsalis
ENSJJAG00000022342	Smarcad1	58	84.590	ENSSPUG00000004633	SMARCAD1	100	84.590	Sphenodon_punctatus
ENSJJAG00000022342	Smarcad1	97	63.376	ENSSPAG00000001970	smarcad1a	98	61.180	Stegastes_partitus
ENSJJAG00000022342	Smarcad1	100	94.553	ENSSSCG00000009193	SMARCAD1	100	96.195	Sus_scrofa
ENSJJAG00000022342	Smarcad1	76	77.806	ENSTGUG00000003127	SMARCAD1	100	78.061	Taeniopygia_guttata
ENSJJAG00000022342	Smarcad1	84	57.225	ENSTNIG00000017585	smarcad1a	99	57.551	Tetraodon_nigroviridis
ENSJJAG00000022342	Smarcad1	91	97.222	ENSTBEG00000002789	SMARCAD1	91	97.222	Tupaia_belangeri
ENSJJAG00000022342	Smarcad1	98	93.446	ENSTTRG00000000226	SMARCAD1	100	93.446	Tursiops_truncatus
ENSJJAG00000022342	Smarcad1	100	95.136	ENSUAMG00000022262	SMARCAD1	100	95.136	Ursus_americanus
ENSJJAG00000022342	Smarcad1	100	95.229	ENSUMAG00000004549	SMARCAD1	100	95.229	Ursus_maritimus
ENSJJAG00000022342	Smarcad1	100	95.039	ENSVVUG00000007271	SMARCAD1	100	96.195	Vulpes_vulpes
ENSJJAG00000022342	Smarcad1	84	65.529	ENSXETG00000019214	smarcad1	100	65.415	Xenopus_tropicalis
ENSJJAG00000022342	Smarcad1	76	58.634	ENSXCOG00000005232	smarcad1a	88	56.959	Xiphophorus_couchianus