EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000022360 (Gene tree)
Gene ID: -
Gene Symbol: Larp1b
Alias: 1700108L22Rik|4933421B21Rik|Larp2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 49466 bases
Position: chrJH725458.1:40799-90264
Accession: 101602110
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000022267	La	PF05383.17	2.3e-21	1	1
ENSJJAP00000022270	La	PF05383.17	4.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000028834	-	867	-	ENSJJAP00000022270	288 (aa)	-	-
ENSJJAT00000028817	-	2074	XM_012948460	ENSJJAP00000022253	14 (aa)	XP_012803914	-
ENSJJAT00000028831	-	1008	-	ENSJJAP00000022267	335 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000022360's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000022360's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000022360	Larp1b	99	85.586	ENSG00000138709	LARP1B	99	85.586	Homo_sapiens
ENSJJAG00000022360	Larp1b	99	88.922	ENSAMEG00000002748	LARP1B	99	88.922	Ailuropoda_melanoleuca
ENSJJAG00000022360	Larp1b	98	75.684	ENSANAG00000034618	LARP1B	95	75.684	Aotus_nancymaae
ENSJJAG00000022360	Larp1b	98	85.714	ENSBTAG00000012135	LARP1B	63	85.714	Bos_taurus
ENSJJAG00000022360	Larp1b	99	87.087	ENSCJAG00000003338	LARP1B	99	87.087	Callithrix_jacchus
ENSJJAG00000022360	Larp1b	99	89.199	ENSCAFG00020018899	LARP1B	99	89.199	Canis_lupus_dingo
ENSJJAG00000022360	Larp1b	99	86.458	ENSCHIG00000023144	LARP1B	99	86.458	Capra_hircus
ENSJJAG00000022360	Larp1b	99	85.315	ENSTSYG00000002037	-	99	85.315	Carlito_syrichta
ENSJJAG00000022360	Larp1b	76	89.286	ENSCPOG00000034668	-	99	65.269	Cavia_porcellus
ENSJJAG00000022360	Larp1b	99	87.349	ENSCCAG00000021948	LARP1B	99	87.349	Cebus_capucinus
ENSJJAG00000022360	Larp1b	99	83.483	ENSCATG00000013541	LARP1B	99	83.483	Cercocebus_atys
ENSJJAG00000022360	Larp1b	99	82.230	ENSCLAG00000006448	-	99	82.230	Chinchilla_lanigera
ENSJJAG00000022360	Larp1b	99	88.462	ENSCANG00000026958	LARP1B	99	88.462	Colobus_angolensis_palliatus
ENSJJAG00000022360	Larp1b	99	90.941	ENSCGRG00001004660	-	99	90.941	Cricetulus_griseus_chok1gshd
ENSJJAG00000022360	Larp1b	99	90.592	ENSCGRG00000001914	-	99	90.592	Cricetulus_griseus_crigri
ENSJJAG00000022360	Larp1b	98	86.585	ENSDNOG00000018765	-	64	86.585	Dasypus_novemcinctus
ENSJJAG00000022360	Larp1b	99	89.510	ENSEASG00005018106	LARP1B	99	89.510	Equus_asinus_asinus
ENSJJAG00000022360	Larp1b	99	86.826	ENSFCAG00000014650	-	99	86.826	Felis_catus
ENSJJAG00000022360	Larp1b	99	85.586	ENSGGOG00000015900	LARP1B	99	85.586	Gorilla_gorilla
ENSJJAG00000022360	Larp1b	99	81.787	ENSHGLG00000006728	-	99	81.787	Heterocephalus_glaber_female
ENSJJAG00000022360	Larp1b	98	69.605	ENSHGLG00000013922	-	96	68.085	Heterocephalus_glaber_female
ENSJJAG00000022360	Larp1b	98	69.605	ENSHGLG00100016491	-	96	68.085	Heterocephalus_glaber_male
ENSJJAG00000022360	Larp1b	99	82.578	ENSHGLG00100014041	-	95	82.578	Heterocephalus_glaber_male
ENSJJAG00000022360	Larp1b	96	68.536	ENSSTOG00000034510	-	87	68.224	Ictidomys_tridecemlineatus
ENSJJAG00000022360	Larp1b	99	86.806	ENSSTOG00000008596	-	99	86.806	Ictidomys_tridecemlineatus
ENSJJAG00000022360	Larp1b	99	76.364	ENSSTOG00000021917	-	94	76.667	Ictidomys_tridecemlineatus
ENSJJAG00000022360	Larp1b	90	74.131	ENSSTOG00000033183	-	96	73.600	Ictidomys_tridecemlineatus
ENSJJAG00000022360	Larp1b	98	67.879	ENSLACG00000015247	LARP1B	85	66.465	Latimeria_chalumnae
ENSJJAG00000022360	Larp1b	99	88.955	ENSLAFG00000008473	-	99	88.955	Loxodonta_africana
ENSJJAG00000022360	Larp1b	99	86.787	ENSMFAG00000002218	LARP1B	99	86.787	Macaca_fascicularis
ENSJJAG00000022360	Larp1b	99	63.986	ENSMFAG00000003306	-	92	84.828	Macaca_fascicularis
ENSJJAG00000022360	Larp1b	99	86.787	ENSMMUG00000021347	LARP1B	99	86.787	Macaca_mulatta
ENSJJAG00000022360	Larp1b	64	85.315	ENSMNEG00000027747	-	93	85.315	Macaca_nemestrina
ENSJJAG00000022360	Larp1b	80	57.328	ENSMZEG00005002545	larp1b	54	55.185	Maylandia_zebra
ENSJJAG00000022360	Larp1b	99	90.592	ENSMAUG00000007879	-	99	90.592	Mesocricetus_auratus
ENSJJAG00000022360	Larp1b	98	79.649	ENSMICG00000037883	-	88	79.225	Microcebus_murinus
ENSJJAG00000022360	Larp1b	99	89.521	ENSMICG00000036111	LARP1B	99	89.521	Microcebus_murinus
ENSJJAG00000022360	Larp1b	97	65.644	ENSMICG00000028052	-	63	65.644	Microcebus_murinus
ENSJJAG00000022360	Larp1b	79	90.494	ENSMOCG00000001490	Larp1b	95	90.494	Microtus_ochrogaster
ENSJJAG00000022360	Larp1b	99	89.547	MGP_CAROLIEiJ_G0024962	Larp1b	99	89.547	Mus_caroli
ENSJJAG00000022360	Larp1b	99	90.592	ENSMUSG00000025762	Larp1b	99	90.592	Mus_musculus
ENSJJAG00000022360	Larp1b	99	90.592	MGP_PahariEiJ_G0026403	Larp1b	99	90.592	Mus_pahari
ENSJJAG00000022360	Larp1b	99	90.592	MGP_SPRETEiJ_G0025897	Larp1b	99	90.592	Mus_spretus
ENSJJAG00000022360	Larp1b	99	85.886	ENSNLEG00000013819	LARP1B	99	85.886	Nomascus_leucogenys
ENSJJAG00000022360	Larp1b	99	82.927	ENSODEG00000001292	-	99	82.927	Octodon_degus
ENSJJAG00000022360	Larp1b	99	85.285	ENSPPAG00000030439	LARP1B	99	85.285	Pan_paniscus
ENSJJAG00000022360	Larp1b	99	86.826	ENSPPRG00000002743	-	99	86.826	Panthera_pardus
ENSJJAG00000022360	Larp1b	99	86.826	ENSPTIG00000011225	LARP1B	99	86.826	Panthera_tigris_altaica
ENSJJAG00000022360	Larp1b	99	84.985	ENSPTRG00000016437	LARP1B	99	84.985	Pan_troglodytes
ENSJJAG00000022360	Larp1b	99	86.787	ENSPANG00000012488	LARP1B	99	86.787	Papio_anubis
ENSJJAG00000022360	Larp1b	99	81.882	ENSPCIG00000026516	LARP1B	87	82.371	Phascolarctos_cinereus
ENSJJAG00000022360	Larp1b	99	49.307	ENSPFOG00000022837	-	52	49.030	Poecilia_formosa
ENSJJAG00000022360	Larp1b	80	53.710	ENSPREG00000005955	-	89	53.357	Poecilia_reticulata
ENSJJAG00000022360	Larp1b	99	88.922	ENSPCOG00000021874	LARP1B	99	88.922	Propithecus_coquereli
ENSJJAG00000022360	Larp1b	99	91.018	ENSRNOG00000038366	Larp1b	99	91.018	Rattus_norvegicus
ENSJJAG00000022360	Larp1b	99	78.078	ENSRBIG00000038568	-	91	78.078	Rhinopithecus_bieti
ENSJJAG00000022360	Larp1b	99	84.685	ENSRBIG00000039982	-	99	83.483	Rhinopithecus_bieti
ENSJJAG00000022360	Larp1b	99	80.488	ENSRROG00000038525	-	95	80.139	Rhinopithecus_roxellana
ENSJJAG00000022360	Larp1b	99	86.787	ENSRROG00000030771	LARP1B	99	86.787	Rhinopithecus_roxellana
ENSJJAG00000022360	Larp1b	98	85.671	ENSSSCG00000034280	LARP1B	63	85.671	Sus_scrofa
ENSJJAG00000022360	Larp1b	99	53.846	ENSSSCG00000040491	-	99	53.310	Sus_scrofa
ENSJJAG00000022360	Larp1b	99	78.443	ENSUAMG00000016938	-	99	78.209	Ursus_americanus
ENSJJAG00000022360	Larp1b	98	88.110	ENSVVUG00000011307	LARP1B	64	88.110	Vulpes_vulpes