EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000022566 (Gene tree)
Gene ID: 101593716
Gene Symbol: Sf3a1
Alias: 1200014H24Rik|5930416L09Rik
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 27943 bases
Position: chrJH725505.1:1602661-1630603
Accession: 101593716
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000022548	PRP21_like_P	PF12230.8	8.7e-52	1	1
ENSJJAP00000022548	Surp	PF01805.20	5.9e-46	1	2
ENSJJAP00000022548	Surp	PF01805.20	5.9e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000029115	-	2385	XM_004664062	ENSJJAP00000022548	794 (aa)	XP_004664119	-

Gene Model

Click here to download ENSJJAG00000022566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000022566's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000022566	Sf3a1	100	98.741	ENSG00000099995	SF3A1	100	98.741	Homo_sapiens
ENSJJAG00000022566	Sf3a1	100	83.668	ENSAPOG00000020465	sf3a1	99	85.290	Acanthochromis_polyacanthus
ENSJJAG00000022566	Sf3a1	100	98.367	ENSAMEG00000007737	SF3A1	100	98.367	Ailuropoda_melanoleuca
ENSJJAG00000022566	Sf3a1	100	84.020	ENSACIG00000020672	sf3a1	98	85.807	Amphilophus_citrinellus
ENSJJAG00000022566	Sf3a1	100	83.543	ENSAOCG00000003060	sf3a1	99	85.290	Amphiprion_ocellaris
ENSJJAG00000022566	Sf3a1	100	83.668	ENSAPEG00000010735	sf3a1	99	85.419	Amphiprion_percula
ENSJJAG00000022566	Sf3a1	96	85.807	ENSATEG00000021201	sf3a1	98	85.309	Anabas_testudineus
ENSJJAG00000022566	Sf3a1	95	94.320	ENSAPLG00000009057	SF3A1	99	93.661	Anas_platyrhynchos
ENSJJAG00000022566	Sf3a1	100	85.732	ENSACAG00000009415	SF3A1	100	87.085	Anolis_carolinensis
ENSJJAG00000022566	Sf3a1	100	98.992	ENSANAG00000032045	SF3A1	100	98.992	Aotus_nancymaae
ENSJJAG00000022566	Sf3a1	100	84.125	ENSACLG00000012622	sf3a1	99	85.788	Astatotilapia_calliptera
ENSJJAG00000022566	Sf3a1	99	82.636	ENSAMXG00000005382	sf3a1	99	84.556	Astyanax_mexicanus
ENSJJAG00000022566	Sf3a1	100	98.992	ENSBTAG00000003390	SF3A1	100	98.992	Bos_taurus
ENSJJAG00000022566	Sf3a1	84	43.268	WBGene00004188	prp-21	94	43.321	Caenorhabditis_elegans
ENSJJAG00000022566	Sf3a1	100	99.118	ENSCJAG00000010370	SF3A1	100	99.118	Callithrix_jacchus
ENSJJAG00000022566	Sf3a1	100	98.741	ENSCAFG00000012559	SF3A1	100	98.741	Canis_familiaris
ENSJJAG00000022566	Sf3a1	100	98.741	ENSCAFG00020000838	SF3A1	100	98.741	Canis_lupus_dingo
ENSJJAG00000022566	Sf3a1	100	98.866	ENSCHIG00000018642	SF3A1	100	98.866	Capra_hircus
ENSJJAG00000022566	Sf3a1	100	99.244	ENSTSYG00000004739	SF3A1	100	99.244	Carlito_syrichta
ENSJJAG00000022566	Sf3a1	94	81.442	ENSCAPG00000015414	SF3A1	98	81.442	Cavia_aperea
ENSJJAG00000022566	Sf3a1	100	98.866	ENSCPOG00000014589	SF3A1	100	98.866	Cavia_porcellus
ENSJJAG00000022566	Sf3a1	100	98.992	ENSCCAG00000032006	SF3A1	100	98.992	Cebus_capucinus
ENSJJAG00000022566	Sf3a1	100	98.992	ENSCATG00000029241	SF3A1	100	98.992	Cercocebus_atys
ENSJJAG00000022566	Sf3a1	100	98.615	ENSCLAG00000006508	SF3A1	100	98.615	Chinchilla_lanigera
ENSJJAG00000022566	Sf3a1	100	98.866	ENSCSAG00000009470	SF3A1	100	98.866	Chlorocebus_sabaeus
ENSJJAG00000022566	Sf3a1	61	99.083	ENSCHOG00000005201	SF3A1	69	99.083	Choloepus_hoffmanni
ENSJJAG00000022566	Sf3a1	100	91.195	ENSCPBG00000007595	SF3A1	100	91.321	Chrysemys_picta_bellii
ENSJJAG00000022566	Sf3a1	94	52.513	ENSCING00000008526	-	66	58.046	Ciona_intestinalis
ENSJJAG00000022566	Sf3a1	96	51.742	ENSCSAVG00000005608	-	91	64.286	Ciona_savignyi
ENSJJAG00000022566	Sf3a1	100	98.866	ENSCANG00000033564	SF3A1	100	98.866	Colobus_angolensis_palliatus
ENSJJAG00000022566	Sf3a1	100	98.615	ENSCGRG00001008933	Sf3a1	100	98.615	Cricetulus_griseus_chok1gshd
ENSJJAG00000022566	Sf3a1	100	98.615	ENSCGRG00000006127	Sf3a1	100	98.615	Cricetulus_griseus_crigri
ENSJJAG00000022566	Sf3a1	100	81.556	ENSCSEG00000010792	sf3a1	98	83.225	Cynoglossus_semilaevis
ENSJJAG00000022566	Sf3a1	100	82.915	ENSCVAG00000004560	sf3a1	98	84.115	Cyprinodon_variegatus
ENSJJAG00000022566	Sf3a1	100	82.434	ENSDARG00000041887	sf3a1	97	84.746	Danio_rerio
ENSJJAG00000022566	Sf3a1	100	98.618	ENSDNOG00000010629	SF3A1	100	98.618	Dasypus_novemcinctus
ENSJJAG00000022566	Sf3a1	100	99.244	ENSDORG00000005613	Sf3a1	100	99.244	Dipodomys_ordii
ENSJJAG00000022566	Sf3a1	79	61.654	FBgn0266917	Sf3a1	84	59.567	Drosophila_melanogaster
ENSJJAG00000022566	Sf3a1	89	95.875	ENSETEG00000017194	SF3A1	100	95.875	Echinops_telfairi
ENSJJAG00000022566	Sf3a1	100	64.941	ENSEBUG00000001285	sf3a1	96	67.244	Eptatretus_burgeri
ENSJJAG00000022566	Sf3a1	100	99.118	ENSEASG00005010254	SF3A1	100	99.118	Equus_asinus_asinus
ENSJJAG00000022566	Sf3a1	100	99.118	ENSECAG00000023962	SF3A1	100	99.118	Equus_caballus
ENSJJAG00000022566	Sf3a1	73	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSJJAG00000022566	Sf3a1	100	82.353	ENSELUG00000022578	sf3a1	97	83.984	Esox_lucius
ENSJJAG00000022566	Sf3a1	100	98.992	ENSFCAG00000011932	SF3A1	100	98.992	Felis_catus
ENSJJAG00000022566	Sf3a1	95	93.386	ENSFALG00000006944	SF3A1	97	93.014	Ficedula_albicollis
ENSJJAG00000022566	Sf3a1	100	98.992	ENSFDAG00000009560	SF3A1	100	98.992	Fukomys_damarensis
ENSJJAG00000022566	Sf3a1	100	84.045	ENSFHEG00000010866	sf3a1	98	85.417	Fundulus_heteroclitus
ENSJJAG00000022566	Sf3a1	100	80.881	ENSGMOG00000016024	sf3a1	97	81.064	Gadus_morhua
ENSJJAG00000022566	Sf3a1	95	94.312	ENSGALG00000007937	SF3A1	97	93.661	Gallus_gallus
ENSJJAG00000022566	Sf3a1	100	83.291	ENSGAFG00000009111	sf3a1	97	84.706	Gambusia_affinis
ENSJJAG00000022566	Sf3a1	100	82.138	ENSGACG00000011893	sf3a1	97	83.508	Gasterosteus_aculeatus
ENSJJAG00000022566	Sf3a1	96	91.339	ENSGAGG00000000762	SF3A1	99	91.470	Gopherus_agassizii
ENSJJAG00000022566	Sf3a1	100	98.741	ENSGGOG00000012631	SF3A1	100	98.741	Gorilla_gorilla
ENSJJAG00000022566	Sf3a1	100	84.125	ENSHBUG00000015795	sf3a1	99	85.788	Haplochromis_burtoni
ENSJJAG00000022566	Sf3a1	100	99.118	ENSHGLG00000007907	SF3A1	100	99.118	Heterocephalus_glaber_female
ENSJJAG00000022566	Sf3a1	100	99.118	ENSHGLG00100013799	SF3A1	100	99.118	Heterocephalus_glaber_male
ENSJJAG00000022566	Sf3a1	100	80.276	ENSHCOG00000015423	sf3a1	98	81.226	Hippocampus_comes
ENSJJAG00000022566	Sf3a1	96	82.552	ENSIPUG00000002470	sf3a1	98	82.812	Ictalurus_punctatus
ENSJJAG00000022566	Sf3a1	100	99.244	ENSSTOG00000013892	SF3A1	100	99.244	Ictidomys_tridecemlineatus
ENSJJAG00000022566	Sf3a1	100	82.663	ENSKMAG00000002400	sf3a1	98	84.766	Kryptolebias_marmoratus
ENSJJAG00000022566	Sf3a1	100	82.412	ENSLBEG00000022974	sf3a1	97	84.052	Labrus_bergylta
ENSJJAG00000022566	Sf3a1	100	86.967	ENSLACG00000003565	SF3A1	97	88.411	Latimeria_chalumnae
ENSJJAG00000022566	Sf3a1	100	84.856	ENSLOCG00000008251	sf3a1	97	86.883	Lepisosteus_oculatus
ENSJJAG00000022566	Sf3a1	100	98.615	ENSLAFG00000000448	SF3A1	100	98.615	Loxodonta_africana
ENSJJAG00000022566	Sf3a1	97	62.468	ENSLAFG00000026032	-	97	62.339	Loxodonta_africana
ENSJJAG00000022566	Sf3a1	100	98.741	ENSMFAG00000031979	SF3A1	100	98.741	Macaca_fascicularis
ENSJJAG00000022566	Sf3a1	100	98.741	ENSMMUG00000005547	SF3A1	100	98.741	Macaca_mulatta
ENSJJAG00000022566	Sf3a1	100	98.615	ENSMNEG00000037229	SF3A1	100	98.615	Macaca_nemestrina
ENSJJAG00000022566	Sf3a1	100	98.866	ENSMLEG00000041908	SF3A1	100	98.866	Mandrillus_leucophaeus
ENSJJAG00000022566	Sf3a1	97	85.751	ENSMAMG00000006460	sf3a1	96	86.328	Mastacembelus_armatus
ENSJJAG00000022566	Sf3a1	100	84.125	ENSMZEG00005009633	sf3a1	99	85.788	Maylandia_zebra
ENSJJAG00000022566	Sf3a1	95	94.312	ENSMGAG00000001330	SF3A1	99	93.653	Meleagris_gallopavo
ENSJJAG00000022566	Sf3a1	92	95.355	ENSMAUG00000020317	Sf3a1	94	95.355	Mesocricetus_auratus
ENSJJAG00000022566	Sf3a1	100	98.615	ENSMICG00000010038	SF3A1	100	98.615	Microcebus_murinus
ENSJJAG00000022566	Sf3a1	100	98.741	ENSMOCG00000008438	Sf3a1	100	98.741	Microtus_ochrogaster
ENSJJAG00000022566	Sf3a1	100	81.533	ENSMMOG00000015588	sf3a1	97	82.552	Mola_mola
ENSJJAG00000022566	Sf3a1	100	97.607	ENSMODG00000009270	SF3A1	100	97.607	Monodelphis_domestica
ENSJJAG00000022566	Sf3a1	100	83.899	ENSMALG00000000148	sf3a1	99	86.104	Monopterus_albus
ENSJJAG00000022566	Sf3a1	100	98.237	MGP_CAROLIEiJ_G0016029	Sf3a1	100	98.237	Mus_caroli
ENSJJAG00000022566	Sf3a1	100	98.237	ENSMUSG00000002129	Sf3a1	100	98.237	Mus_musculus
ENSJJAG00000022566	Sf3a1	100	98.111	MGP_PahariEiJ_G0016862	Sf3a1	100	98.111	Mus_pahari
ENSJJAG00000022566	Sf3a1	100	98.237	MGP_SPRETEiJ_G0016870	Sf3a1	100	98.237	Mus_spretus
ENSJJAG00000022566	Sf3a1	100	98.741	ENSMPUG00000013144	SF3A1	100	98.741	Mustela_putorius_furo
ENSJJAG00000022566	Sf3a1	100	99.118	ENSMLUG00000002139	SF3A1	100	99.118	Myotis_lucifugus
ENSJJAG00000022566	Sf3a1	100	98.992	ENSNGAG00000016977	Sf3a1	100	98.992	Nannospalax_galili
ENSJJAG00000022566	Sf3a1	100	83.541	ENSNBRG00000016642	sf3a1	96	86.693	Neolamprologus_brichardi
ENSJJAG00000022566	Sf3a1	100	98.866	ENSNLEG00000003686	SF3A1	100	98.866	Nomascus_leucogenys
ENSJJAG00000022566	Sf3a1	96	88.173	ENSMEUG00000008741	SF3A1	100	88.173	Notamacropus_eugenii
ENSJJAG00000022566	Sf3a1	100	98.741	ENSOPRG00000016636	SF3A1	100	98.741	Ochotona_princeps
ENSJJAG00000022566	Sf3a1	100	98.741	ENSODEG00000002571	SF3A1	100	98.741	Octodon_degus
ENSJJAG00000022566	Sf3a1	100	84.105	ENSONIG00000010848	sf3a1	99	85.161	Oreochromis_niloticus
ENSJJAG00000022566	Sf3a1	100	98.992	ENSOCUG00000007633	SF3A1	100	98.992	Oryctolagus_cuniculus
ENSJJAG00000022566	Sf3a1	96	82.045	ENSORLG00000013050	sf3a1	98	83.827	Oryzias_latipes
ENSJJAG00000022566	Sf3a1	99	80.405	ENSORLG00020003236	sf3a1	94	83.962	Oryzias_latipes_hni
ENSJJAG00000022566	Sf3a1	100	82.538	ENSORLG00015017411	sf3a1	98	84.109	Oryzias_latipes_hsok
ENSJJAG00000022566	Sf3a1	100	82.412	ENSOMEG00000013362	sf3a1	98	83.984	Oryzias_melastigma
ENSJJAG00000022566	Sf3a1	100	98.741	ENSOGAG00000012931	SF3A1	100	98.741	Otolemur_garnettii
ENSJJAG00000022566	Sf3a1	100	97.103	ENSOARG00000006849	SF3A1	100	97.103	Ovis_aries
ENSJJAG00000022566	Sf3a1	100	97.733	ENSPPAG00000041790	SF3A1	100	97.733	Pan_paniscus
ENSJJAG00000022566	Sf3a1	100	98.992	ENSPPRG00000004391	SF3A1	100	98.992	Panthera_pardus
ENSJJAG00000022566	Sf3a1	97	99.223	ENSPTIG00000000844	SF3A1	100	99.223	Panthera_tigris_altaica
ENSJJAG00000022566	Sf3a1	100	98.741	ENSPTRG00000014240	SF3A1	100	98.741	Pan_troglodytes
ENSJJAG00000022566	Sf3a1	100	98.866	ENSPANG00000020772	SF3A1	100	98.866	Papio_anubis
ENSJJAG00000022566	Sf3a1	83	94.505	ENSPSIG00000012803	SF3A1	96	94.518	Pelodiscus_sinensis
ENSJJAG00000022566	Sf3a1	96	84.293	ENSPMGG00000023096	sf3a1	100	83.508	Periophthalmus_magnuspinnatus
ENSJJAG00000022566	Sf3a1	100	98.866	ENSPEMG00000009494	Sf3a1	100	98.866	Peromyscus_maniculatus_bairdii
ENSJJAG00000022566	Sf3a1	69	77.717	ENSPMAG00000007139	-	89	79.434	Petromyzon_marinus
ENSJJAG00000022566	Sf3a1	100	97.733	ENSPCIG00000022692	SF3A1	100	97.733	Phascolarctos_cinereus
ENSJJAG00000022566	Sf3a1	100	75.031	ENSPFOG00000016768	sf3a1	93	78.776	Poecilia_formosa
ENSJJAG00000022566	Sf3a1	100	83.417	ENSPLAG00000017268	sf3a1	97	84.967	Poecilia_latipinna
ENSJJAG00000022566	Sf3a1	84	85.843	ENSPMEG00000019811	sf3a1	98	85.090	Poecilia_mexicana
ENSJJAG00000022566	Sf3a1	100	83.417	ENSPREG00000010347	sf3a1	97	85.359	Poecilia_reticulata
ENSJJAG00000022566	Sf3a1	100	98.866	ENSPPYG00000011707	SF3A1	100	98.866	Pongo_abelii
ENSJJAG00000022566	Sf3a1	57	99.057	ENSPCAG00000003266	SF3A1	57	99.057	Procavia_capensis
ENSJJAG00000022566	Sf3a1	100	98.866	ENSPCOG00000026630	SF3A1	100	98.866	Propithecus_coquereli
ENSJJAG00000022566	Sf3a1	100	94.584	ENSPVAG00000017719	SF3A1	94	98.255	Pteropus_vampyrus
ENSJJAG00000022566	Sf3a1	100	84.125	ENSPNYG00000018706	sf3a1	99	85.788	Pundamilia_nyererei
ENSJJAG00000022566	Sf3a1	99	82.995	ENSPNAG00000003721	sf3a1	99	84.665	Pygocentrus_nattereri
ENSJJAG00000022566	Sf3a1	100	98.741	ENSRNOG00000005218	Sf3a1	100	98.741	Rattus_norvegicus
ENSJJAG00000022566	Sf3a1	100	98.866	ENSRBIG00000032167	SF3A1	100	98.866	Rhinopithecus_bieti
ENSJJAG00000022566	Sf3a1	100	98.866	ENSRROG00000044908	SF3A1	100	98.866	Rhinopithecus_roxellana
ENSJJAG00000022566	Sf3a1	97	94.968	ENSSBOG00000021960	SF3A1	100	99.409	Saimiri_boliviensis_boliviensis
ENSJJAG00000022566	Sf3a1	97	95.337	ENSSHAG00000003666	SF3A1	98	95.466	Sarcophilus_harrisii
ENSJJAG00000022566	Sf3a1	100	83.375	ENSSFOG00015004579	sf3a1	98	85.237	Scleropages_formosus
ENSJJAG00000022566	Sf3a1	100	81.533	ENSSMAG00000004275	sf3a1	97	83.268	Scophthalmus_maximus
ENSJJAG00000022566	Sf3a1	100	83.645	ENSSDUG00000022219	sf3a1	99	84.903	Seriola_dumerili
ENSJJAG00000022566	Sf3a1	100	83.645	ENSSLDG00000012642	sf3a1	99	84.903	Seriola_lalandi_dorsalis
ENSJJAG00000022566	Sf3a1	97	95.855	ENSSARG00000005960	SF3A1	100	95.855	Sorex_araneus
ENSJJAG00000022566	Sf3a1	96	92.228	ENSSPUG00000018863	SF3A1	97	92.848	Sphenodon_punctatus
ENSJJAG00000022566	Sf3a1	100	84.673	ENSSPAG00000011856	sf3a1	99	85.290	Stegastes_partitus
ENSJJAG00000022566	Sf3a1	100	98.866	ENSSSCG00000010002	SF3A1	100	98.866	Sus_scrofa
ENSJJAG00000022566	Sf3a1	95	94.327	ENSTGUG00000010547	SF3A1	100	93.669	Taeniopygia_guttata
ENSJJAG00000022566	Sf3a1	100	81.156	ENSTRUG00000006118	sf3a1	97	82.222	Takifugu_rubripes
ENSJJAG00000022566	Sf3a1	64	81.413	ENSTNIG00000005713	sf3a1	89	86.607	Tetraodon_nigroviridis
ENSJJAG00000022566	Sf3a1	100	91.562	ENSTBEG00000012771	SF3A1	100	91.562	Tupaia_belangeri
ENSJJAG00000022566	Sf3a1	100	98.616	ENSTTRG00000001535	SF3A1	100	98.616	Tursiops_truncatus
ENSJJAG00000022566	Sf3a1	99	97.843	ENSUAMG00000006750	SF3A1	99	97.843	Ursus_americanus
ENSJJAG00000022566	Sf3a1	99	97.586	ENSUMAG00000016665	SF3A1	98	99.093	Ursus_maritimus
ENSJJAG00000022566	Sf3a1	100	98.741	ENSVVUG00000003075	SF3A1	100	98.741	Vulpes_vulpes
ENSJJAG00000022566	Sf3a1	100	85.822	ENSXETG00000016144	sf3a1	97	86.883	Xenopus_tropicalis
ENSJJAG00000022566	Sf3a1	100	83.040	ENSXCOG00000015653	sf3a1	97	84.444	Xiphophorus_couchianus
ENSJJAG00000022566	Sf3a1	100	83.166	ENSXMAG00000002753	sf3a1	97	84.575	Xiphophorus_maculatus