EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000022671 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 1576 bases
Position: chrJH725469.1:9874255-9875830
Accession: 101609385
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000022678	RNA_pol_L_2	PF13656.6	4e-28	1	1
ENSJJAP00000022682	RNA_pol_L_2	PF13656.6	4.9e-28	1	1
ENSJJAP00000022678	RNA_pol_L	PF01193.24	1.4e-13	1	1
ENSJJAP00000022682	RNA_pol_L	PF01193.24	1.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000029252	-	405	-	ENSJJAP00000022682	134 (aa)	-	-
ENSJJAT00000029248	-	402	XM_004659846	ENSJJAP00000022678	120 (aa)	XP_004659903	-

Gene Model

Click here to download ENSJJAG00000022671's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000022671's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000022671	-	86	33.010	ENSJJAG00000013854	-	85	33.010
ENSJJAG00000022671	-	100	74.167	ENSJJAG00000021667	-	73	75.000
ENSJJAG00000022671	-	86	31.068	ENSJJAG00000018834	-	85	31.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000022671	-	100	93.333	ENSG00000186184	POLR1D	100	93.103	Homo_sapiens
ENSJJAG00000022671	-	93	67.568	ENSAPOG00000021882	polr1d	98	67.568	Acanthochromis_polyacanthus
ENSJJAG00000022671	-	100	93.333	ENSAMEG00000019095	POLR1D	99	93.548	Ailuropoda_melanoleuca
ENSJJAG00000022671	-	89	69.444	ENSACIG00000013328	polr1d	94	69.444	Amphilophus_citrinellus
ENSJJAG00000022671	-	93	66.964	ENSAOCG00000018500	polr1d	98	66.964	Amphiprion_ocellaris
ENSJJAG00000022671	-	93	66.071	ENSAPEG00000009489	polr1d	98	66.071	Amphiprion_percula
ENSJJAG00000022671	-	89	66.355	ENSATEG00000019322	polr1d	94	66.355	Anabas_testudineus
ENSJJAG00000022671	-	94	64.655	ENSACAG00000015753	POLR1D	100	64.655	Anolis_carolinensis
ENSJJAG00000022671	-	100	93.333	ENSANAG00000024486	POLR1D	97	90.226	Aotus_nancymaae
ENSJJAG00000022671	-	89	70.093	ENSACLG00000023805	polr1d	94	70.093	Astatotilapia_calliptera
ENSJJAG00000022671	-	87	70.192	ENSAMXG00000036118	polr1d	92	68.868	Astyanax_mexicanus
ENSJJAG00000022671	-	100	90.833	ENSBTAG00000033252	-	97	87.218	Bos_taurus
ENSJJAG00000022671	-	100	90.833	ENSBTAG00000008642	POLR1D	97	87.218	Bos_taurus
ENSJJAG00000022671	-	68	39.024	WBGene00010230	rpac-19	57	39.024	Caenorhabditis_elegans
ENSJJAG00000022671	-	100	92.500	ENSCJAG00000044669	POLR1D	97	89.474	Callithrix_jacchus
ENSJJAG00000022671	-	100	93.333	ENSCAFG00000006755	POLR1D	97	90.226	Canis_familiaris
ENSJJAG00000022671	-	100	91.667	ENSCHIG00000021910	POLR1D	97	87.970	Capra_hircus
ENSJJAG00000022671	-	100	91.667	ENSTSYG00000026817	-	93	91.129	Carlito_syrichta
ENSJJAG00000022671	-	100	77.869	ENSTSYG00000034852	-	98	78.151	Carlito_syrichta
ENSJJAG00000022671	-	58	75.362	ENSCAPG00000006058	-	70	75.362	Cavia_aperea
ENSJJAG00000022671	-	58	76.812	ENSCPOG00000030450	-	70	76.812	Cavia_porcellus
ENSJJAG00000022671	-	100	72.500	ENSCCAG00000020191	-	97	71.429	Cebus_capucinus
ENSJJAG00000022671	-	100	92.500	ENSCCAG00000021349	-	97	89.474	Cebus_capucinus
ENSJJAG00000022671	-	100	80.000	ENSCATG00000022900	-	97	78.195	Cercocebus_atys
ENSJJAG00000022671	-	100	92.500	ENSCATG00000030710	-	97	89.474	Cercocebus_atys
ENSJJAG00000022671	-	100	91.667	ENSCLAG00000017623	POLR1D	100	91.935	Chinchilla_lanigera
ENSJJAG00000022671	-	81	77.320	ENSCPBG00000004719	POLR1D	96	77.320	Chrysemys_picta_bellii
ENSJJAG00000022671	-	100	92.500	ENSCANG00000028632	-	97	89.474	Colobus_angolensis_palliatus
ENSJJAG00000022671	-	100	88.333	ENSCANG00000037694	-	97	85.714	Colobus_angolensis_palliatus
ENSJJAG00000022671	-	100	93.333	ENSCGRG00001021251	Polr1d	97	89.474	Cricetulus_griseus_chok1gshd
ENSJJAG00000022671	-	100	93.333	ENSCGRG00000011639	Polr1d	97	89.474	Cricetulus_griseus_crigri
ENSJJAG00000022671	-	87	68.269	ENSCSEG00000018268	polr1d	96	63.393	Cynoglossus_semilaevis
ENSJJAG00000022671	-	88	70.476	ENSCVAG00000018527	polr1d	92	70.476	Cyprinodon_variegatus
ENSJJAG00000022671	-	92	64.545	ENSDARG00000037570	polr1d	98	64.545	Danio_rerio
ENSJJAG00000022671	-	100	90.833	ENSDNOG00000043676	-	97	87.218	Dasypus_novemcinctus
ENSJJAG00000022671	-	100	89.167	ENSDNOG00000046247	-	99	84.962	Dasypus_novemcinctus
ENSJJAG00000022671	-	100	92.500	ENSDORG00000029155	Polr1d	97	88.722	Dipodomys_ordii
ENSJJAG00000022671	-	72	43.023	FBgn0086447	l(2)37Cg	81	43.023	Drosophila_melanogaster
ENSJJAG00000022671	-	100	88.333	ENSETEG00000012797	POLR1D	100	87.097	Echinops_telfairi
ENSJJAG00000022671	-	73	70.115	ENSEBUG00000011748	polr1d	61	70.115	Eptatretus_burgeri
ENSJJAG00000022671	-	96	92.174	ENSEASG00005022487	POLR1D	96	89.062	Equus_asinus_asinus
ENSJJAG00000022671	-	100	92.500	ENSEEUG00000013144	POLR1D	100	92.742	Erinaceus_europaeus
ENSJJAG00000022671	-	88	65.094	ENSELUG00000005105	rpac2	93	65.094	Esox_lucius
ENSJJAG00000022671	-	100	91.667	ENSFCAG00000030162	POLR1D	97	88.722	Felis_catus
ENSJJAG00000022671	-	80	75.000	ENSFALG00000011463	POLR1D	95	75.000	Ficedula_albicollis
ENSJJAG00000022671	-	100	90.000	ENSFDAG00000004463	POLR1D	97	87.218	Fukomys_damarensis
ENSJJAG00000022671	-	89	72.222	ENSFHEG00000015410	polr1d	94	72.222	Fundulus_heteroclitus
ENSJJAG00000022671	-	53	70.312	ENSGALG00000007470	POLR1D	63	70.312	Gallus_gallus
ENSJJAG00000022671	-	88	70.476	ENSGAFG00000001693	polr1d	92	70.476	Gambusia_affinis
ENSJJAG00000022671	-	98	67.797	ENSGACG00000018585	polr1d	100	67.797	Gasterosteus_aculeatus
ENSJJAG00000022671	-	90	73.148	ENSGAGG00000008503	POLR1D	95	73.148	Gopherus_agassizii
ENSJJAG00000022671	-	100	93.333	ENSGGOG00000004235	POLR1D	97	90.226	Gorilla_gorilla
ENSJJAG00000022671	-	89	70.093	ENSHBUG00000002111	polr1d	94	70.093	Haplochromis_burtoni
ENSJJAG00000022671	-	100	90.000	ENSHGLG00000003202	POLR1D	97	87.218	Heterocephalus_glaber_female
ENSJJAG00000022671	-	100	90.000	ENSHGLG00100009393	POLR1D	97	87.218	Heterocephalus_glaber_male
ENSJJAG00000022671	-	89	66.355	ENSHCOG00000003258	polr1d	94	66.355	Hippocampus_comes
ENSJJAG00000022671	-	91	70.642	ENSIPUG00000014810	polr1d	95	70.642	Ictalurus_punctatus
ENSJJAG00000022671	-	100	94.167	ENSSTOG00000013877	POLR1D	97	90.977	Ictidomys_tridecemlineatus
ENSJJAG00000022671	-	88	66.981	ENSKMAG00000015256	polr1d	93	66.981	Kryptolebias_marmoratus
ENSJJAG00000022671	-	88	70.476	ENSLBEG00000015919	polr1d	92	70.476	Labrus_bergylta
ENSJJAG00000022671	-	92	67.273	ENSLACG00000006810	POLR1D	95	65.217	Latimeria_chalumnae
ENSJJAG00000022671	-	60	75.676	ENSLOCG00000014976	polr1d	100	75.676	Lepisosteus_oculatus
ENSJJAG00000022671	-	99	88.235	ENSLAFG00000032290	POLR1D	97	83.459	Loxodonta_africana
ENSJJAG00000022671	-	100	93.333	ENSMFAG00000045264	POLR1D	96	93.548	Macaca_fascicularis
ENSJJAG00000022671	-	97	93.103	ENSMMUG00000020386	POLR1D	100	93.103	Macaca_mulatta
ENSJJAG00000022671	-	100	70.833	ENSMMUG00000041570	-	96	69.925	Macaca_mulatta
ENSJJAG00000022671	-	100	75.000	ENSMNEG00000038120	-	97	73.684	Macaca_nemestrina
ENSJJAG00000022671	-	100	93.333	ENSMNEG00000008630	-	97	90.226	Macaca_nemestrina
ENSJJAG00000022671	-	100	93.333	ENSMLEG00000041048	-	97	90.226	Mandrillus_leucophaeus
ENSJJAG00000022671	-	100	80.833	ENSMLEG00000032251	-	97	78.947	Mandrillus_leucophaeus
ENSJJAG00000022671	-	84	69.307	ENSMAMG00000014834	polr1d	94	69.307	Mastacembelus_armatus
ENSJJAG00000022671	-	85	72.549	ENSMZEG00005006638	polr1d	90	72.549	Maylandia_zebra
ENSJJAG00000022671	-	77	77.174	ENSMGAG00000005322	POLR1D	84	77.174	Meleagris_gallopavo
ENSJJAG00000022671	-	100	93.333	ENSMAUG00000001946	Polr1d	97	89.474	Mesocricetus_auratus
ENSJJAG00000022671	-	98	94.017	ENSMICG00000016883	-	95	90.769	Microcebus_murinus
ENSJJAG00000022671	-	100	73.333	ENSMICG00000007349	-	98	72.180	Microcebus_murinus
ENSJJAG00000022671	-	98	93.162	ENSMOCG00000021288	Polr1d	95	90.000	Microtus_ochrogaster
ENSJJAG00000022671	-	89	69.159	ENSMMOG00000009605	polr1d	94	69.159	Mola_mola
ENSJJAG00000022671	-	88	82.075	ENSMODG00000023881	POLR1D	93	82.075	Monodelphis_domestica
ENSJJAG00000022671	-	89	66.355	ENSMALG00000010652	polr1d	94	66.355	Monopterus_albus
ENSJJAG00000022671	-	100	89.167	MGP_CAROLIEiJ_G0028034	Polr1d	97	86.466	Mus_caroli
ENSJJAG00000022671	-	100	89.167	ENSMUSG00000029642	Polr1d	97	86.466	Mus_musculus
ENSJJAG00000022671	-	100	88.333	MGP_PahariEiJ_G0024600	Polr1d	97	85.714	Mus_pahari
ENSJJAG00000022671	-	100	88.333	MGP_SPRETEiJ_G0029032	Polr1d	97	85.714	Mus_spretus
ENSJJAG00000022671	-	100	84.167	ENSMLUG00000004118	-	93	83.871	Myotis_lucifugus
ENSJJAG00000022671	-	100	92.500	ENSMLUG00000027169	-	93	91.935	Myotis_lucifugus
ENSJJAG00000022671	-	97	93.103	ENSNGAG00000006014	Polr1d	100	93.103	Nannospalax_galili
ENSJJAG00000022671	-	89	70.093	ENSNBRG00000020327	polr1d	94	70.093	Neolamprologus_brichardi
ENSJJAG00000022671	-	100	93.333	ENSNLEG00000000358	POLR1D	97	90.226	Nomascus_leucogenys
ENSJJAG00000022671	-	100	90.000	ENSODEG00000005294	-	97	87.218	Octodon_degus
ENSJJAG00000022671	-	100	74.167	ENSODEG00000014801	-	97	72.932	Octodon_degus
ENSJJAG00000022671	-	88	79.048	ENSOANG00000008708	-	97	79.048	Ornithorhynchus_anatinus
ENSJJAG00000022671	-	100	92.500	ENSOCUG00000015706	POLR1D	79	88.722	Oryctolagus_cuniculus
ENSJJAG00000022671	-	89	68.224	ENSORLG00000010257	polr1d	94	68.224	Oryzias_latipes
ENSJJAG00000022671	-	93	66.071	ENSORLG00020000533	polr1d	84	60.484	Oryzias_latipes_hni
ENSJJAG00000022671	-	93	66.964	ENSORLG00015013267	polr1d	75	66.667	Oryzias_latipes_hsok
ENSJJAG00000022671	-	98	64.957	ENSOMEG00000014912	polr1d	82	63.415	Oryzias_melastigma
ENSJJAG00000022671	-	100	91.667	ENSOGAG00000014601	POLR1D	97	88.722	Otolemur_garnettii
ENSJJAG00000022671	-	100	91.667	ENSOARG00000017005	POLR1D	95	91.129	Ovis_aries
ENSJJAG00000022671	-	100	92.500	ENSPPAG00000028138	POLR1D	97	89.474	Pan_paniscus
ENSJJAG00000022671	-	98	93.162	ENSPPRG00000003381	POLR1D	95	90.000	Panthera_pardus
ENSJJAG00000022671	-	100	91.667	ENSPTIG00000018137	POLR1D	93	91.935	Panthera_tigris_altaica
ENSJJAG00000022671	-	100	93.333	ENSPTRG00000005734	POLR1D	97	90.226	Pan_troglodytes
ENSJJAG00000022671	-	100	93.333	ENSPANG00000020259	-	97	90.226	Papio_anubis
ENSJJAG00000022671	-	100	80.000	ENSPANG00000035051	-	97	78.195	Papio_anubis
ENSJJAG00000022671	-	89	65.421	ENSPKIG00000021891	polr1d	94	50.847	Paramormyrops_kingsleyae
ENSJJAG00000022671	-	97	70.940	ENSPSIG00000011822	POLR1D	91	70.940	Pelodiscus_sinensis
ENSJJAG00000022671	-	93	65.179	ENSPMGG00000010359	polr1d	97	65.179	Periophthalmus_magnuspinnatus
ENSJJAG00000022671	-	97	57.265	ENSPMGG00000012998	POLR1D	95	52.344	Periophthalmus_magnuspinnatus
ENSJJAG00000022671	-	100	92.500	ENSPEMG00000006336	-	95	92.742	Peromyscus_maniculatus_bairdii
ENSJJAG00000022671	-	90	57.407	ENSPMAG00000004228	polr1d	91	57.407	Petromyzon_marinus
ENSJJAG00000022671	-	88	82.075	ENSPCIG00000001673	POLR1D	93	82.075	Phascolarctos_cinereus
ENSJJAG00000022671	-	88	70.476	ENSPFOG00000023343	polr1d	92	71.250	Poecilia_formosa
ENSJJAG00000022671	-	88	70.476	ENSPLAG00000009675	polr1d	92	70.476	Poecilia_latipinna
ENSJJAG00000022671	-	88	70.476	ENSPMEG00000004628	polr1d	92	70.476	Poecilia_mexicana
ENSJJAG00000022671	-	88	70.476	ENSPREG00000022032	polr1d	92	70.476	Poecilia_reticulata
ENSJJAG00000022671	-	100	91.667	ENSPCOG00000028175	POLR1D	97	88.722	Propithecus_coquereli
ENSJJAG00000022671	-	89	70.093	ENSPNYG00000000107	polr1d	94	70.093	Pundamilia_nyererei
ENSJJAG00000022671	-	88	64.762	ENSPNAG00000001512	polr1d	94	62.500	Pygocentrus_nattereri
ENSJJAG00000022671	-	100	90.833	ENSRBIG00000000336	-	93	91.129	Rhinopithecus_bieti
ENSJJAG00000022671	-	100	93.333	ENSRBIG00000036378	-	97	90.226	Rhinopithecus_bieti
ENSJJAG00000022671	-	100	90.000	ENSRROG00000026751	-	93	89.516	Rhinopithecus_roxellana
ENSJJAG00000022671	-	100	93.333	ENSRROG00000042232	-	97	90.226	Rhinopithecus_roxellana
ENSJJAG00000022671	-	76	54.945	YNL113W	RPC19	83	47.899	Saccharomyces_cerevisiae
ENSJJAG00000022671	-	84	89.109	ENSSBOG00000030146	-	77	89.524	Saimiri_boliviensis_boliviensis
ENSJJAG00000022671	-	100	93.333	ENSSBOG00000028482	-	97	90.226	Saimiri_boliviensis_boliviensis
ENSJJAG00000022671	-	95	75.439	ENSSHAG00000001190	POLR1D	88	75.439	Sarcophilus_harrisii
ENSJJAG00000022671	-	93	72.072	ENSSFOG00015011375	polr1d	97	72.072	Scleropages_formosus
ENSJJAG00000022671	-	89	68.224	ENSSMAG00000011861	polr1d	94	68.224	Scophthalmus_maximus
ENSJJAG00000022671	-	89	66.355	ENSSDUG00000011930	polr1d	94	66.355	Seriola_dumerili
ENSJJAG00000022671	-	83	69.000	ENSSLDG00000023871	polr1d	85	69.000	Seriola_lalandi_dorsalis
ENSJJAG00000022671	-	100	91.667	ENSSARG00000007840	POLR1D	97	88.722	Sorex_araneus
ENSJJAG00000022671	-	88	74.528	ENSSPUG00000005786	POLR1D	93	71.429	Sphenodon_punctatus
ENSJJAG00000022671	-	88	70.476	ENSSPAG00000011764	polr1d	92	70.476	Stegastes_partitus
ENSJJAG00000022671	-	100	90.000	ENSSSCG00000009310	POLR1D	97	87.218	Sus_scrofa
ENSJJAG00000022671	-	80	75.000	ENSTGUG00000005450	POLR1D	100	75.000	Taeniopygia_guttata
ENSJJAG00000022671	-	87	65.385	ENSTRUG00000019741	polr1d	91	65.385	Takifugu_rubripes
ENSJJAG00000022671	-	100	90.833	ENSTBEG00000007006	POLR1D	100	91.129	Tupaia_belangeri
ENSJJAG00000022671	-	100	93.333	ENSUAMG00000011413	POLR1D	97	90.226	Ursus_americanus
ENSJJAG00000022671	-	100	93.333	ENSUMAG00000016968	POLR1D	97	93.548	Ursus_maritimus
ENSJJAG00000022671	-	100	93.333	ENSVVUG00000009216	POLR1D	97	90.226	Vulpes_vulpes
ENSJJAG00000022671	-	82	73.469	ENSXCOG00000011731	polr1d	75	73.469	Xiphophorus_couchianus
ENSJJAG00000022671	-	82	73.469	ENSXMAG00000017538	polr1d	75	73.469	Xiphophorus_maculatus