EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000022763 (Gene tree)
Gene ID: 101612697
Gene Symbol: Smg5
Alias: -
Full Name: SMG5%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 35021 bases
Position: chrJH725537.1:5502948-5537968
Accession: 101612697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000022815	EST1	PF10374.9	6.9e-24	1	1
ENSJJAP00000022815	EST1_DNA_bind	PF10373.9	4.1e-39	1	2
ENSJJAP00000022815	EST1_DNA_bind	PF10373.9	4.1e-39	2	2
ENSJJAP00000022815	PIN_4	PF13638.6	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000029385	-	3242	XM_004667279	ENSJJAP00000022815	1019 (aa)	XP_004667336	UPI000332EC89

Gene Model

Click here to download ENSJJAG00000022763's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000022763's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000022763	Smg5	100	92.836	ENSG00000198952	SMG5	100	93.032	Homo_sapiens
ENSJJAG00000022763	Smg5	99	67.188	ENSAPOG00000019690	smg5	99	67.353	Acanthochromis_polyacanthus
ENSJJAG00000022763	Smg5	98	88.844	ENSAMEG00000014458	SMG5	100	89.056	Ailuropoda_melanoleuca
ENSJJAG00000022763	Smg5	99	64.947	ENSACIG00000001353	smg5	99	65.709	Amphilophus_citrinellus
ENSJJAG00000022763	Smg5	98	64.833	ENSAOCG00000019483	smg5	99	61.532	Amphiprion_ocellaris
ENSJJAG00000022763	Smg5	98	66.206	ENSAPEG00000022949	smg5	98	66.302	Amphiprion_percula
ENSJJAG00000022763	Smg5	99	65.511	ENSATEG00000005348	smg5	99	66.538	Anabas_testudineus
ENSJJAG00000022763	Smg5	98	77.485	ENSAPLG00000010263	SMG5	100	77.485	Anas_platyrhynchos
ENSJJAG00000022763	Smg5	100	92.836	ENSANAG00000032899	SMG5	100	93.032	Aotus_nancymaae
ENSJJAG00000022763	Smg5	99	64.880	ENSACLG00000009311	smg5	99	65.547	Astatotilapia_calliptera
ENSJJAG00000022763	Smg5	99	42.857	ENSBTAG00000021747	-	99	42.512	Bos_taurus
ENSJJAG00000022763	Smg5	100	91.266	ENSBTAG00000009435	SMG5	100	91.658	Bos_taurus
ENSJJAG00000022763	Smg5	100	92.640	ENSCJAG00000005684	SMG5	100	92.836	Callithrix_jacchus
ENSJJAG00000022763	Smg5	100	90.186	ENSCAFG00000016839	SMG5	100	90.579	Canis_familiaris
ENSJJAG00000022763	Smg5	100	90.186	ENSCAFG00020006061	SMG5	100	90.579	Canis_lupus_dingo
ENSJJAG00000022763	Smg5	99	43.204	ENSCHIG00000006323	-	99	42.969	Capra_hircus
ENSJJAG00000022763	Smg5	100	91.168	ENSCHIG00000007709	SMG5	100	91.560	Capra_hircus
ENSJJAG00000022763	Smg5	100	92.542	ENSTSYG00000004099	SMG5	100	92.647	Carlito_syrichta
ENSJJAG00000022763	Smg5	97	72.396	ENSCAPG00000003631	SMG5	100	73.493	Cavia_aperea
ENSJJAG00000022763	Smg5	100	92.843	ENSCPOG00000015696	SMG5	100	92.941	Cavia_porcellus
ENSJJAG00000022763	Smg5	100	92.836	ENSCCAG00000027409	SMG5	100	93.032	Cebus_capucinus
ENSJJAG00000022763	Smg5	100	92.934	ENSCATG00000030539	SMG5	100	93.131	Cercocebus_atys
ENSJJAG00000022763	Smg5	100	92.745	ENSCLAG00000003983	SMG5	100	92.941	Chinchilla_lanigera
ENSJJAG00000022763	Smg5	100	92.836	ENSCSAG00000002120	SMG5	100	93.032	Chlorocebus_sabaeus
ENSJJAG00000022763	Smg5	54	90.146	ENSCHOG00000008741	-	57	90.146	Choloepus_hoffmanni
ENSJJAG00000022763	Smg5	94	76.566	ENSCPBG00000025848	SMG5	100	77.351	Chrysemys_picta_bellii
ENSJJAG00000022763	Smg5	94	34.592	ENSCING00000008706	-	99	34.619	Ciona_intestinalis
ENSJJAG00000022763	Smg5	100	88.616	ENSCANG00000029208	SMG5	100	88.420	Colobus_angolensis_palliatus
ENSJJAG00000022763	Smg5	100	92.647	ENSCGRG00001006336	Smg5	100	92.451	Cricetulus_griseus_chok1gshd
ENSJJAG00000022763	Smg5	98	92.671	ENSCGRG00000005111	Smg5	100	92.462	Cricetulus_griseus_crigri
ENSJJAG00000022763	Smg5	99	64.763	ENSCSEG00000014220	smg5	99	64.831	Cynoglossus_semilaevis
ENSJJAG00000022763	Smg5	99	60.388	ENSCVAG00000000529	smg5	99	60.680	Cyprinodon_variegatus
ENSJJAG00000022763	Smg5	92	35.169	ENSDNOG00000039862	-	99	34.852	Dasypus_novemcinctus
ENSJJAG00000022763	Smg5	100	88.224	ENSDNOG00000000051	SMG5	100	88.420	Dasypus_novemcinctus
ENSJJAG00000022763	Smg5	100	92.843	ENSDORG00000010382	Smg5	100	92.843	Dipodomys_ordii
ENSJJAG00000022763	Smg5	70	34.615	FBgn0019890	Smg5	62	34.615	Drosophila_melanogaster
ENSJJAG00000022763	Smg5	82	94.175	ENSETEG00000010336	SMG5	91	94.175	Echinops_telfairi
ENSJJAG00000022763	Smg5	90	47.564	ENSEBUG00000003739	smg5	98	47.302	Eptatretus_burgeri
ENSJJAG00000022763	Smg5	100	92.051	ENSEASG00005019122	SMG5	100	92.345	Equus_asinus_asinus
ENSJJAG00000022763	Smg5	100	92.149	ENSECAG00000001389	SMG5	100	92.444	Equus_caballus
ENSJJAG00000022763	Smg5	72	97.695	ENSEEUG00000012690	SMG5	74	97.695	Erinaceus_europaeus
ENSJJAG00000022763	Smg5	99	64.655	ENSELUG00000012585	smg5	99	64.464	Esox_lucius
ENSJJAG00000022763	Smg5	100	89.804	ENSFCAG00000011783	SMG5	100	90.196	Felis_catus
ENSJJAG00000022763	Smg5	58	80.500	ENSFALG00000001166	-	99	80.500	Ficedula_albicollis
ENSJJAG00000022763	Smg5	98	91.055	ENSFDAG00000017388	SMG5	100	90.754	Fukomys_damarensis
ENSJJAG00000022763	Smg5	97	61.871	ENSFHEG00000013939	smg5	100	61.771	Fundulus_heteroclitus
ENSJJAG00000022763	Smg5	99	76.493	ENSGALG00000029918	-	100	76.308	Gallus_gallus
ENSJJAG00000022763	Smg5	73	74.434	ENSGAFG00000021691	smg5	96	68.051	Gambusia_affinis
ENSJJAG00000022763	Smg5	100	78.368	ENSGAGG00000016131	SMG5	100	78.558	Gopherus_agassizii
ENSJJAG00000022763	Smg5	100	92.738	ENSGGOG00000010932	SMG5	100	92.934	Gorilla_gorilla
ENSJJAG00000022763	Smg5	99	64.734	ENSHBUG00000008654	smg5	99	65.048	Haplochromis_burtoni
ENSJJAG00000022763	Smg5	100	89.932	ENSHGLG00000019152	SMG5	100	90.304	Heterocephalus_glaber_female
ENSJJAG00000022763	Smg5	90	89.760	ENSHGLG00100015948	SMG5	99	90.284	Heterocephalus_glaber_male
ENSJJAG00000022763	Smg5	86	72.662	ENSHCOG00000010229	smg5	93	72.422	Hippocampus_comes
ENSJJAG00000022763	Smg5	50	60.185	ENSIPUG00000006624	Smg5	99	62.238	Ictalurus_punctatus
ENSJJAG00000022763	Smg5	100	92.934	ENSSTOG00000001780	SMG5	100	93.131	Ictidomys_tridecemlineatus
ENSJJAG00000022763	Smg5	50	60.256	ENSKMAG00000014586	smg5	99	61.504	Kryptolebias_marmoratus
ENSJJAG00000022763	Smg5	99	65.484	ENSLBEG00000002145	smg5	99	65.865	Labrus_bergylta
ENSJJAG00000022763	Smg5	100	64.265	ENSLACG00000010521	SMG5	100	64.252	Latimeria_chalumnae
ENSJJAG00000022763	Smg5	100	90.972	ENSLAFG00000006241	SMG5	100	91.168	Loxodonta_africana
ENSJJAG00000022763	Smg5	100	92.836	ENSMFAG00000045357	SMG5	100	93.032	Macaca_fascicularis
ENSJJAG00000022763	Smg5	100	92.836	ENSMMUG00000000090	SMG5	100	93.032	Macaca_mulatta
ENSJJAG00000022763	Smg5	100	92.836	ENSMNEG00000044425	SMG5	100	93.032	Macaca_nemestrina
ENSJJAG00000022763	Smg5	100	86.804	ENSMLEG00000041192	SMG5	100	86.413	Mandrillus_leucophaeus
ENSJJAG00000022763	Smg5	99	61.463	ENSMAMG00000010683	smg5	100	61.815	Mastacembelus_armatus
ENSJJAG00000022763	Smg5	63	59.070	ENSMZEG00005016543	smg5	100	58.060	Maylandia_zebra
ENSJJAG00000022763	Smg5	99	63.368	ENSMZEG00005015815	smg5	99	64.061	Maylandia_zebra
ENSJJAG00000022763	Smg5	100	91.765	ENSMAUG00000010381	Smg5	100	91.569	Mesocricetus_auratus
ENSJJAG00000022763	Smg5	55	44.810	ENSMAUG00000000043	-	96	44.291	Mesocricetus_auratus
ENSJJAG00000022763	Smg5	100	92.542	ENSMICG00000002257	SMG5	100	92.836	Microcebus_murinus
ENSJJAG00000022763	Smg5	100	91.683	ENSMOCG00000016590	Smg5	100	91.194	Microtus_ochrogaster
ENSJJAG00000022763	Smg5	99	59.447	ENSMMOG00000017199	smg5	99	60.018	Mola_mola
ENSJJAG00000022763	Smg5	87	87.416	ENSMODG00000016901	SMG5	98	87.640	Monodelphis_domestica
ENSJJAG00000022763	Smg5	81	38.049	ENSMODG00000004532	-	91	37.561	Monodelphis_domestica
ENSJJAG00000022763	Smg5	76	38.287	ENSMODG00000010675	-	85	38.120	Monodelphis_domestica
ENSJJAG00000022763	Smg5	97	34.950	ENSMODG00000004511	-	99	34.650	Monodelphis_domestica
ENSJJAG00000022763	Smg5	75	40.000	ENSMODG00000004735	-	86	40.214	Monodelphis_domestica
ENSJJAG00000022763	Smg5	99	59.929	ENSMALG00000010375	smg5	99	60.284	Monopterus_albus
ENSJJAG00000022763	Smg5	100	92.549	MGP_CAROLIEiJ_G0025163	Smg5	100	98.883	Mus_caroli
ENSJJAG00000022763	Smg5	100	92.549	ENSMUSG00000001415	Smg5	99	98.883	Mus_musculus
ENSJJAG00000022763	Smg5	100	91.961	MGP_PahariEiJ_G0026606	Smg5	100	98.883	Mus_pahari
ENSJJAG00000022763	Smg5	100	92.451	MGP_SPRETEiJ_G0026104	Smg5	100	98.883	Mus_spretus
ENSJJAG00000022763	Smg5	94	88.562	ENSMPUG00000004546	SMG5	100	88.982	Mustela_putorius_furo
ENSJJAG00000022763	Smg5	100	91.309	ENSMLUG00000008518	SMG5	100	91.406	Myotis_lucifugus
ENSJJAG00000022763	Smg5	100	92.934	ENSNGAG00000020706	Smg5	100	92.934	Nannospalax_galili
ENSJJAG00000022763	Smg5	97	63.636	ENSNBRG00000004332	smg5	98	63.664	Neolamprologus_brichardi
ENSJJAG00000022763	Smg5	100	92.444	ENSNLEG00000012439	SMG5	100	92.640	Nomascus_leucogenys
ENSJJAG00000022763	Smg5	100	85.967	ENSMEUG00000012834	SMG5	100	86.163	Notamacropus_eugenii
ENSJJAG00000022763	Smg5	100	91.462	ENSOPRG00000009152	SMG5	100	91.168	Ochotona_princeps
ENSJJAG00000022763	Smg5	100	92.051	ENSODEG00000012237	SMG5	100	92.051	Octodon_degus
ENSJJAG00000022763	Smg5	89	40.263	ENSOCUG00000023338	-	99	39.588	Oryctolagus_cuniculus
ENSJJAG00000022763	Smg5	98	91.775	ENSOCUG00000012886	SMG5	100	92.161	Oryctolagus_cuniculus
ENSJJAG00000022763	Smg5	99	64.786	ENSORLG00020013127	smg5	99	65.695	Oryzias_latipes_hni
ENSJJAG00000022763	Smg5	99	64.597	ENSORLG00015019014	smg5	99	65.795	Oryzias_latipes_hsok
ENSJJAG00000022763	Smg5	100	91.364	ENSOGAG00000004966	SMG5	100	92.149	Otolemur_garnettii
ENSJJAG00000022763	Smg5	100	91.266	ENSOARG00000005778	SMG5	100	91.658	Ovis_aries
ENSJJAG00000022763	Smg5	99	43.177	ENSOARG00000011963	-	99	42.927	Ovis_aries
ENSJJAG00000022763	Smg5	100	92.444	ENSPPAG00000011996	SMG5	100	92.640	Pan_paniscus
ENSJJAG00000022763	Smg5	98	89.648	ENSPPRG00000011901	SMG5	100	90.050	Panthera_pardus
ENSJJAG00000022763	Smg5	99	81.647	ENSPTIG00000007892	SMG5	98	82.828	Panthera_tigris_altaica
ENSJJAG00000022763	Smg5	100	92.640	ENSPTRG00000023925	SMG5	100	92.836	Pan_troglodytes
ENSJJAG00000022763	Smg5	100	92.640	ENSPTRG00000049282	-	100	92.836	Pan_troglodytes
ENSJJAG00000022763	Smg5	100	92.934	ENSPANG00000011201	SMG5	100	93.131	Papio_anubis
ENSJJAG00000022763	Smg5	99	64.797	ENSPKIG00000009402	smg5	99	65.561	Paramormyrops_kingsleyae
ENSJJAG00000022763	Smg5	98	79.365	ENSPSIG00000015198	SMG5	100	79.464	Pelodiscus_sinensis
ENSJJAG00000022763	Smg5	99	60.478	ENSPMGG00000010465	smg5	99	60.166	Periophthalmus_magnuspinnatus
ENSJJAG00000022763	Smg5	100	92.647	ENSPEMG00000001819	Smg5	100	92.451	Peromyscus_maniculatus_bairdii
ENSJJAG00000022763	Smg5	56	44.845	ENSPEMG00000010022	-	95	44.502	Peromyscus_maniculatus_bairdii
ENSJJAG00000022763	Smg5	99	49.567	ENSPMAG00000000410	smg5	100	49.953	Petromyzon_marinus
ENSJJAG00000022763	Smg5	100	87.353	ENSPCIG00000018938	SMG5	100	87.549	Phascolarctos_cinereus
ENSJJAG00000022763	Smg5	99	65.517	ENSPMEG00000014105	smg5	99	65.709	Poecilia_mexicana
ENSJJAG00000022763	Smg5	50	60.781	ENSPREG00000017713	smg5	99	61.995	Poecilia_reticulata
ENSJJAG00000022763	Smg5	100	92.738	ENSPPYG00000000723	SMG5	100	92.934	Pongo_abelii
ENSJJAG00000022763	Smg5	75	93.370	ENSPCAG00000008412	SMG5	81	93.370	Procavia_capensis
ENSJJAG00000022763	Smg5	100	92.738	ENSPCOG00000004741	SMG5	100	93.229	Propithecus_coquereli
ENSJJAG00000022763	Smg5	100	81.551	ENSPVAG00000016748	SMG5	100	82.826	Pteropus_vampyrus
ENSJJAG00000022763	Smg5	93	63.657	ENSPNYG00000013397	smg5	99	60.915	Pundamilia_nyererei
ENSJJAG00000022763	Smg5	99	62.692	ENSPNAG00000028363	smg5	99	62.613	Pygocentrus_nattereri
ENSJJAG00000022763	Smg5	100	92.451	ENSRNOG00000019590	Smg5	100	92.255	Rattus_norvegicus
ENSJJAG00000022763	Smg5	100	92.640	ENSRBIG00000027428	SMG5	100	92.836	Rhinopithecus_bieti
ENSJJAG00000022763	Smg5	100	92.542	ENSRROG00000030035	SMG5	100	92.738	Rhinopithecus_roxellana
ENSJJAG00000022763	Smg5	100	92.934	ENSSBOG00000033339	SMG5	100	93.131	Saimiri_boliviensis_boliviensis
ENSJJAG00000022763	Smg5	99	33.525	ENSSHAG00000009572	-	99	33.526	Sarcophilus_harrisii
ENSJJAG00000022763	Smg5	64	38.596	ENSSHAG00000000935	-	91	40.123	Sarcophilus_harrisii
ENSJJAG00000022763	Smg5	87	39.578	ENSSHAG00000000561	-	87	39.578	Sarcophilus_harrisii
ENSJJAG00000022763	Smg5	98	86.913	ENSSHAG00000014163	SMG5	100	86.913	Sarcophilus_harrisii
ENSJJAG00000022763	Smg5	99	65.634	ENSSFOG00015024175	smg5	99	65.537	Scleropages_formosus
ENSJJAG00000022763	Smg5	99	61.525	ENSSMAG00000013059	smg5	99	61.668	Scophthalmus_maximus
ENSJJAG00000022763	Smg5	99	60.334	ENSSDUG00000007122	smg5	99	61.239	Seriola_dumerili
ENSJJAG00000022763	Smg5	99	61.518	ENSSLDG00000011418	smg5	99	61.545	Seriola_lalandi_dorsalis
ENSJJAG00000022763	Smg5	90	77.500	ENSSARG00000012484	SMG5	100	77.283	Sorex_araneus
ENSJJAG00000022763	Smg5	94	76.215	ENSSPUG00000002260	SMG5	100	76.215	Sphenodon_punctatus
ENSJJAG00000022763	Smg5	93	73.933	ENSSPAG00000014266	smg5	98	65.922	Stegastes_partitus
ENSJJAG00000022763	Smg5	54	35.325	ENSSSCG00000037182	-	87	35.283	Sus_scrofa
ENSJJAG00000022763	Smg5	99	71.611	ENSSSCG00000039308	-	100	71.709	Sus_scrofa
ENSJJAG00000022763	Smg5	100	92.934	ENSSSCG00000006490	-	100	93.229	Sus_scrofa
ENSJJAG00000022763	Smg5	99	79.290	ENSTGUG00000003748	-	100	79.260	Taeniopygia_guttata
ENSJJAG00000022763	Smg5	99	63.878	ENSTRUG00000012580	smg5	99	64.451	Takifugu_rubripes
ENSJJAG00000022763	Smg5	99	65.276	ENSTNIG00000010303	smg5	99	65.276	Tetraodon_nigroviridis
ENSJJAG00000022763	Smg5	60	100.000	ENSTBEG00000002777	SMG5	60	100.000	Tupaia_belangeri
ENSJJAG00000022763	Smg5	100	87.537	ENSTTRG00000001401	SMG5	100	87.144	Tursiops_truncatus
ENSJJAG00000022763	Smg5	100	89.500	ENSUAMG00000013721	SMG5	100	89.892	Ursus_americanus
ENSJJAG00000022763	Smg5	98	84.870	ENSUMAG00000018041	SMG5	97	85.271	Ursus_maritimus
ENSJJAG00000022763	Smg5	98	82.696	ENSVPAG00000009446	SMG5	99	82.294	Vicugna_pacos
ENSJJAG00000022763	Smg5	100	90.972	ENSVVUG00000005887	SMG5	100	90.677	Vulpes_vulpes
ENSJJAG00000022763	Smg5	77	64.484	ENSXETG00000033791	SMG5	99	64.232	Xenopus_tropicalis
ENSJJAG00000022763	Smg5	59	76.722	ENSXCOG00000004379	smg5	95	70.879	Xiphophorus_couchianus
ENSJJAG00000022763	Smg5	99	65.444	ENSXMAG00000013499	smg5	99	65.700	Xiphophorus_maculatus