EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000022859 (Gene tree)
Gene ID: 101602108
Gene Symbol: Mbd1
Alias: Cxxc3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 13035 bases
Position: chrJH725456.1:8367566-8380600
Accession: 101602108
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000022956	MBD	PF01429.19	4.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000029527	-	1683	XM_004656790	ENSJJAP00000022956	560 (aa)	XP_004656847	-

Gene Model

Click here to download ENSJJAG00000022859's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000022859's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000022859	Mbd1	96	78.889	ENSG00000141644	MBD1	98	78.889	Homo_sapiens
ENSJJAG00000022859	Mbd1	96	65.169	ENSAMEG00000000238	MBD1	94	64.687	Ailuropoda_melanoleuca
ENSJJAG00000022859	Mbd1	58	39.031	ENSACAG00000006091	-	86	39.093	Anolis_carolinensis
ENSJJAG00000022859	Mbd1	98	77.717	ENSANAG00000036253	MBD1	92	77.899	Aotus_nancymaae
ENSJJAG00000022859	Mbd1	100	63.945	ENSBTAG00000003801	MBD1	98	66.833	Bos_taurus
ENSJJAG00000022859	Mbd1	96	67.559	ENSCJAG00000004959	MBD1	98	66.297	Callithrix_jacchus
ENSJJAG00000022859	Mbd1	96	83.270	ENSCAFG00000018928	MBD1	94	64.309	Canis_familiaris
ENSJJAG00000022859	Mbd1	100	65.116	ENSCAFG00020024272	MBD1	100	64.961	Canis_lupus_dingo
ENSJJAG00000022859	Mbd1	96	66.332	ENSCHIG00000021134	MBD1	98	66.833	Capra_hircus
ENSJJAG00000022859	Mbd1	96	72.340	ENSTSYG00000000509	MBD1	98	72.340	Carlito_syrichta
ENSJJAG00000022859	Mbd1	100	69.965	ENSCAPG00000015782	MBD1	100	69.965	Cavia_aperea
ENSJJAG00000022859	Mbd1	100	59.758	ENSCPOG00000001671	MBD1	96	59.970	Cavia_porcellus
ENSJJAG00000022859	Mbd1	96	73.628	ENSCCAG00000034600	MBD1	98	73.721	Cebus_capucinus
ENSJJAG00000022859	Mbd1	96	75.709	ENSCATG00000029959	MBD1	98	75.709	Cercocebus_atys
ENSJJAG00000022859	Mbd1	96	65.378	ENSCLAG00000007457	MBD1	87	65.700	Chinchilla_lanigera
ENSJJAG00000022859	Mbd1	96	68.007	ENSCSAG00000018070	MBD1	98	70.638	Chlorocebus_sabaeus
ENSJJAG00000022859	Mbd1	96	79.074	ENSCANG00000033425	MBD1	98	79.074	Colobus_angolensis_palliatus
ENSJJAG00000022859	Mbd1	100	65.161	ENSCGRG00001014843	Mbd1	100	65.645	Cricetulus_griseus_chok1gshd
ENSJJAG00000022859	Mbd1	100	69.504	ENSCGRG00000014135	Mbd1	100	69.735	Cricetulus_griseus_crigri
ENSJJAG00000022859	Mbd1	100	61.874	ENSDNOG00000015998	MBD1	100	62.359	Dasypus_novemcinctus
ENSJJAG00000022859	Mbd1	100	76.950	ENSDORG00000013917	Mbd1	100	76.950	Dipodomys_ordii
ENSJJAG00000022859	Mbd1	96	76.568	ENSEASG00005003857	MBD1	90	76.199	Equus_asinus_asinus
ENSJJAG00000022859	Mbd1	100	66.355	ENSECAG00000011497	MBD1	72	81.609	Equus_caballus
ENSJJAG00000022859	Mbd1	96	71.378	ENSFCAG00000015730	MBD1	98	70.848	Felis_catus
ENSJJAG00000022859	Mbd1	98	75.000	ENSFDAG00000011085	MBD1	97	74.864	Fukomys_damarensis
ENSJJAG00000022859	Mbd1	96	78.704	ENSGGOG00000016966	MBD1	98	78.704	Gorilla_gorilla
ENSJJAG00000022859	Mbd1	96	69.012	ENSHGLG00000008740	MBD1	98	69.514	Heterocephalus_glaber_female
ENSJJAG00000022859	Mbd1	96	71.631	ENSHGLG00100005198	MBD1	98	72.695	Heterocephalus_glaber_male
ENSJJAG00000022859	Mbd1	100	66.825	ENSSTOG00000007780	MBD1	100	66.984	Ictidomys_tridecemlineatus
ENSJJAG00000022859	Mbd1	100	60.256	ENSLAFG00000031328	MBD1	100	60.387	Loxodonta_africana
ENSJJAG00000022859	Mbd1	96	75.709	ENSMFAG00000026335	MBD1	98	75.709	Macaca_fascicularis
ENSJJAG00000022859	Mbd1	98	72.958	ENSMMUG00000009050	MBD1	98	67.903	Macaca_mulatta
ENSJJAG00000022859	Mbd1	96	75.709	ENSMNEG00000038822	MBD1	98	75.709	Macaca_nemestrina
ENSJJAG00000022859	Mbd1	96	75.709	ENSMLEG00000043121	MBD1	98	75.709	Mandrillus_leucophaeus
ENSJJAG00000022859	Mbd1	96	78.000	ENSMICG00000006414	MBD1	98	77.091	Microcebus_murinus
ENSJJAG00000022859	Mbd1	100	66.385	ENSMUSG00000024561	Mbd1	100	66.385	Mus_musculus
ENSJJAG00000022859	Mbd1	100	67.466	MGP_PahariEiJ_G0019128	Mbd1	100	67.637	Mus_pahari
ENSJJAG00000022859	Mbd1	100	64.516	MGP_SPRETEiJ_G0023304	Mbd1	100	64.516	Mus_spretus
ENSJJAG00000022859	Mbd1	96	64.148	ENSMPUG00000008843	MBD1	94	63.666	Mustela_putorius_furo
ENSJJAG00000022859	Mbd1	96	63.871	ENSMLUG00000008286	MBD1	94	63.285	Myotis_lucifugus
ENSJJAG00000022859	Mbd1	100	77.083	ENSNGAG00000011412	Mbd1	100	75.347	Nannospalax_galili
ENSJJAG00000022859	Mbd1	96	78.519	ENSNLEG00000011661	-	98	78.519	Nomascus_leucogenys
ENSJJAG00000022859	Mbd1	98	69.565	ENSNLEG00000032711	-	91	69.565	Nomascus_leucogenys
ENSJJAG00000022859	Mbd1	96	58.794	ENSOPRG00000007647	MBD1	98	58.794	Ochotona_princeps
ENSJJAG00000022859	Mbd1	100	79.041	ENSODEG00000018451	MBD1	100	79.218	Octodon_degus
ENSJJAG00000022859	Mbd1	96	66.129	ENSOCUG00000006554	MBD1	98	66.290	Oryctolagus_cuniculus
ENSJJAG00000022859	Mbd1	96	64.603	ENSOGAG00000003784	MBD1	94	63.968	Otolemur_garnettii
ENSJJAG00000022859	Mbd1	96	63.563	ENSOARG00000004218	MBD1	93	64.744	Ovis_aries
ENSJJAG00000022859	Mbd1	96	75.355	ENSPPAG00000038886	MBD1	98	75.355	Pan_paniscus
ENSJJAG00000022859	Mbd1	96	71.555	ENSPPRG00000021387	MBD1	98	71.025	Panthera_pardus
ENSJJAG00000022859	Mbd1	96	71.731	ENSPTIG00000021231	MBD1	98	71.201	Panthera_tigris_altaica
ENSJJAG00000022859	Mbd1	96	75.355	ENSPTRG00000010021	MBD1	98	75.355	Pan_troglodytes
ENSJJAG00000022859	Mbd1	98	77.899	ENSPANG00000010867	MBD1	92	77.899	Papio_anubis
ENSJJAG00000022859	Mbd1	100	68.675	ENSPEMG00000022630	Mbd1	100	69.138	Peromyscus_maniculatus_bairdii
ENSJJAG00000022859	Mbd1	96	67.839	ENSPPYG00000009158	MBD1	89	70.302	Pongo_abelii
ENSJJAG00000022859	Mbd1	96	60.302	ENSPCAG00000001648	MBD1	98	59.129	Procavia_capensis
ENSJJAG00000022859	Mbd1	96	80.591	ENSPCOG00000012450	MBD1	98	79.667	Propithecus_coquereli
ENSJJAG00000022859	Mbd1	100	56.899	ENSRNOG00000024104	Mbd1	100	61.618	Rattus_norvegicus
ENSJJAG00000022859	Mbd1	96	65.580	ENSRBIG00000041294	MBD1	98	67.021	Rhinopithecus_bieti
ENSJJAG00000022859	Mbd1	96	78.519	ENSRROG00000032517	MBD1	98	78.519	Rhinopithecus_roxellana
ENSJJAG00000022859	Mbd1	96	75.532	ENSSBOG00000027169	MBD1	98	75.532	Saimiri_boliviensis_boliviensis
ENSJJAG00000022859	Mbd1	58	44.985	ENSSHAG00000003661	-	70	43.902	Sarcophilus_harrisii
ENSJJAG00000022859	Mbd1	100	71.429	ENSSSCG00000004516	MBD1	100	72.101	Sus_scrofa
ENSJJAG00000022859	Mbd1	68	71.028	ENSTBEG00000012651	-	63	69.626	Tupaia_belangeri
ENSJJAG00000022859	Mbd1	88	80.183	ENSTTRG00000015523	MBD1	81	81.459	Tursiops_truncatus
ENSJJAG00000022859	Mbd1	88	82.746	ENSUAMG00000004752	MBD1	98	68.870	Ursus_americanus
ENSJJAG00000022859	Mbd1	92	76.547	ENSUMAG00000002947	MBD1	98	66.778	Ursus_maritimus