EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000023000 (Gene tree)
Gene ID: 101610491
Gene Symbol: Rif1
Alias: 5730435J01Rik|6530403D07Rik|D2Ertd145e
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 85567 bases
Position: chrJH725442.1:28466758-28552324
Accession: 101610491
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000023188	Rif1_N	PF12231.8	2.6e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000029762	-	7071	XM_004651706	ENSJJAP00000023188	2357 (aa)	XP_004651763	-

Gene Model

Click here to download ENSJJAG00000023000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000023000's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000023000	Rif1	100	69.569	ENSG00000080345	RIF1	93	84.712	Homo_sapiens
ENSJJAG00000023000	Rif1	53	46.195	ENSAPOG00000011073	rif1	51	45.756	Acanthochromis_polyacanthus
ENSJJAG00000023000	Rif1	100	70.376	ENSAMEG00000008461	RIF1	99	70.174	Ailuropoda_melanoleuca
ENSJJAG00000023000	Rif1	69	48.084	ENSACIG00000017765	rif1	72	48.687	Amphilophus_citrinellus
ENSJJAG00000023000	Rif1	67	45.622	ENSAOCG00000017231	rif1	66	45.308	Amphiprion_ocellaris
ENSJJAG00000023000	Rif1	71	51.861	ENSAPEG00000013228	rif1	65	50.000	Amphiprion_percula
ENSJJAG00000023000	Rif1	67	47.220	ENSATEG00000022887	rif1	53	47.006	Anabas_testudineus
ENSJJAG00000023000	Rif1	86	63.584	ENSAPLG00000007092	RIF1	90	63.584	Anas_platyrhynchos
ENSJJAG00000023000	Rif1	85	57.958	ENSACAG00000003714	RIF1	89	57.958	Anolis_carolinensis
ENSJJAG00000023000	Rif1	100	68.979	ENSANAG00000024840	RIF1	99	68.939	Aotus_nancymaae
ENSJJAG00000023000	Rif1	95	69.522	ENSBTAG00000021020	RIF1	99	69.350	Bos_taurus
ENSJJAG00000023000	Rif1	100	68.901	ENSCJAG00000003138	RIF1	99	68.861	Callithrix_jacchus
ENSJJAG00000023000	Rif1	100	68.169	ENSCAFG00000005670	RIF1	97	68.330	Canis_familiaris
ENSJJAG00000023000	Rif1	100	69.256	ENSCAFG00020016401	RIF1	99	69.419	Canis_lupus_dingo
ENSJJAG00000023000	Rif1	100	69.209	ENSCHIG00000020327	RIF1	99	69.007	Capra_hircus
ENSJJAG00000023000	Rif1	100	66.979	ENSTSYG00000008861	RIF1	100	66.572	Carlito_syrichta
ENSJJAG00000023000	Rif1	80	67.376	ENSCAPG00000008957	RIF1	94	67.536	Cavia_aperea
ENSJJAG00000023000	Rif1	99	66.364	ENSCPOG00000037898	RIF1	99	66.311	Cavia_porcellus
ENSJJAG00000023000	Rif1	100	68.362	ENSCCAG00000024760	RIF1	99	68.321	Cebus_capucinus
ENSJJAG00000023000	Rif1	100	69.734	ENSCATG00000033353	RIF1	99	69.814	Cercocebus_atys
ENSJJAG00000023000	Rif1	97	68.064	ENSCLAG00000001517	RIF1	99	68.106	Chinchilla_lanigera
ENSJJAG00000023000	Rif1	100	69.721	ENSCSAG00000016089	RIF1	99	69.802	Chlorocebus_sabaeus
ENSJJAG00000023000	Rif1	97	69.198	ENSCHOG00000007187	RIF1	97	69.198	Choloepus_hoffmanni
ENSJJAG00000023000	Rif1	86	69.578	ENSCPBG00000025885	RIF1	91	70.783	Chrysemys_picta_bellii
ENSJJAG00000023000	Rif1	100	68.523	ENSCANG00000028962	RIF1	100	69.393	Colobus_angolensis_palliatus
ENSJJAG00000023000	Rif1	100	69.526	ENSCGRG00001024589	Rif1	99	69.701	Cricetulus_griseus_chok1gshd
ENSJJAG00000023000	Rif1	99	70.814	ENSCGRG00000010713	Rif1	99	71.064	Cricetulus_griseus_crigri
ENSJJAG00000023000	Rif1	65	54.918	ENSCSEG00000003945	rif1	68	54.918	Cynoglossus_semilaevis
ENSJJAG00000023000	Rif1	52	46.195	ENSCVAG00000022479	rif1	53	46.266	Cyprinodon_variegatus
ENSJJAG00000023000	Rif1	59	45.461	ENSDARG00000062650	rif1	52	48.973	Danio_rerio
ENSJJAG00000023000	Rif1	99	66.802	ENSDNOG00000011194	RIF1	97	66.883	Dasypus_novemcinctus
ENSJJAG00000023000	Rif1	92	67.771	ENSETEG00000012421	RIF1	92	67.445	Echinops_telfairi
ENSJJAG00000023000	Rif1	98	79.238	ENSEASG00005023434	RIF1	99	79.693	Equus_asinus_asinus
ENSJJAG00000023000	Rif1	96	81.764	ENSECAG00000012679	RIF1	99	81.764	Equus_caballus
ENSJJAG00000023000	Rif1	63	49.959	ENSELUG00000006826	rif1	60	46.045	Esox_lucius
ENSJJAG00000023000	Rif1	100	68.959	ENSFCAG00000029742	RIF1	99	68.808	Felis_catus
ENSJJAG00000023000	Rif1	80	63.722	ENSFALG00000013874	RIF1	91	64.353	Ficedula_albicollis
ENSJJAG00000023000	Rif1	100	68.195	ENSFDAG00000006538	RIF1	99	68.195	Fukomys_damarensis
ENSJJAG00000023000	Rif1	64	48.335	ENSFHEG00000013721	rif1	65	48.148	Fundulus_heteroclitus
ENSJJAG00000023000	Rif1	54	49.573	ENSGMOG00000003517	rif1	80	48.515	Gadus_morhua
ENSJJAG00000023000	Rif1	81	62.319	ENSGALG00000012484	RIF1	90	62.609	Gallus_gallus
ENSJJAG00000023000	Rif1	68	48.478	ENSGAFG00000017196	rif1	69	51.416	Gambusia_affinis
ENSJJAG00000023000	Rif1	61	50.000	ENSGACG00000008579	rif1	66	49.430	Gasterosteus_aculeatus
ENSJJAG00000023000	Rif1	86	69.725	ENSGAGG00000012595	RIF1	92	70.948	Gopherus_agassizii
ENSJJAG00000023000	Rif1	89	82.178	ENSGGOG00000040178	RIF1	96	82.178	Gorilla_gorilla
ENSJJAG00000023000	Rif1	55	46.969	ENSHBUG00000007125	rif1	59	46.754	Haplochromis_burtoni
ENSJJAG00000023000	Rif1	94	67.848	ENSHGLG00100009807	RIF1	99	67.578	Heterocephalus_glaber_male
ENSJJAG00000023000	Rif1	65	47.439	ENSHCOG00000015943	rif1	60	47.649	Hippocampus_comes
ENSJJAG00000023000	Rif1	50	50.200	ENSIPUG00000021703	rif1	50	50.040	Ictalurus_punctatus
ENSJJAG00000023000	Rif1	100	70.402	ENSSTOG00000020712	RIF1	99	70.602	Ictidomys_tridecemlineatus
ENSJJAG00000023000	Rif1	65	48.502	ENSKMAG00000002852	rif1	67	48.610	Kryptolebias_marmoratus
ENSJJAG00000023000	Rif1	65	48.930	ENSLBEG00000023196	rif1	58	49.035	Labrus_bergylta
ENSJJAG00000023000	Rif1	86	62.310	ENSLACG00000005425	RIF1	89	62.310	Latimeria_chalumnae
ENSJJAG00000023000	Rif1	66	50.607	ENSLOCG00000002657	rif1	85	45.596	Lepisosteus_oculatus
ENSJJAG00000023000	Rif1	100	69.059	ENSLAFG00000009796	RIF1	99	68.978	Loxodonta_africana
ENSJJAG00000023000	Rif1	100	69.814	ENSMFAG00000032233	RIF1	99	69.895	Macaca_fascicularis
ENSJJAG00000023000	Rif1	100	69.895	ENSMMUG00000008611	RIF1	99	69.855	Macaca_mulatta
ENSJJAG00000023000	Rif1	100	69.814	ENSMNEG00000031616	RIF1	99	69.895	Macaca_nemestrina
ENSJJAG00000023000	Rif1	100	69.895	ENSMLEG00000042945	RIF1	99	69.855	Mandrillus_leucophaeus
ENSJJAG00000023000	Rif1	73	46.431	ENSMAMG00000001745	rif1	64	47.961	Mastacembelus_armatus
ENSJJAG00000023000	Rif1	70	46.999	ENSMZEG00005020920	rif1	76	46.574	Maylandia_zebra
ENSJJAG00000023000	Rif1	85	60.920	ENSMGAG00000012732	RIF1	89	61.207	Meleagris_gallopavo
ENSJJAG00000023000	Rif1	94	81.148	ENSMAUG00000013158	Rif1	99	81.148	Mesocricetus_auratus
ENSJJAG00000023000	Rif1	100	70.825	ENSMICG00000046127	RIF1	99	70.825	Microcebus_murinus
ENSJJAG00000023000	Rif1	100	68.829	ENSMOCG00000009381	Rif1	99	68.531	Microtus_ochrogaster
ENSJJAG00000023000	Rif1	64	47.573	ENSMMOG00000006519	rif1	64	46.882	Mola_mola
ENSJJAG00000023000	Rif1	99	56.288	ENSMODG00000003703	RIF1	99	56.135	Monodelphis_domestica
ENSJJAG00000023000	Rif1	59	50.045	ENSMALG00000016759	rif1	66	50.224	Monopterus_albus
ENSJJAG00000023000	Rif1	100	69.256	MGP_CAROLIEiJ_G0023555	Rif1	99	69.092	Mus_caroli
ENSJJAG00000023000	Rif1	100	69.539	ENSMUSG00000036202	Rif1	99	69.416	Mus_musculus
ENSJJAG00000023000	Rif1	100	67.783	MGP_PahariEiJ_G0025006	Rif1	99	67.619	Mus_pahari
ENSJJAG00000023000	Rif1	100	69.363	MGP_SPRETEiJ_G0024476	Rif1	99	69.199	Mus_spretus
ENSJJAG00000023000	Rif1	100	69.522	ENSMPUG00000000371	RIF1	99	69.361	Mustela_putorius_furo
ENSJJAG00000023000	Rif1	90	68.105	ENSMLUG00000003376	RIF1	99	68.196	Myotis_lucifugus
ENSJJAG00000023000	Rif1	100	72.799	ENSNGAG00000009268	Rif1	99	72.509	Nannospalax_galili
ENSJJAG00000023000	Rif1	70	46.001	ENSNBRG00000014257	rif1	75	45.706	Neolamprologus_brichardi
ENSJJAG00000023000	Rif1	100	67.939	ENSNLEG00000010955	RIF1	99	68.100	Nomascus_leucogenys
ENSJJAG00000023000	Rif1	79	74.107	ENSMEUG00000007601	-	84	74.107	Notamacropus_eugenii
ENSJJAG00000023000	Rif1	99	66.667	ENSODEG00000003950	RIF1	99	66.830	Octodon_degus
ENSJJAG00000023000	Rif1	76	72.115	ENSOANG00000006078	-	76	72.115	Ornithorhynchus_anatinus
ENSJJAG00000023000	Rif1	100	68.470	ENSOCUG00000017435	RIF1	99	68.147	Oryctolagus_cuniculus
ENSJJAG00000023000	Rif1	64	46.534	ENSORLG00020001302	rif1	67	46.454	Oryzias_latipes_hni
ENSJJAG00000023000	Rif1	64	46.656	ENSORLG00015000009	rif1	67	46.773	Oryzias_latipes_hsok
ENSJJAG00000023000	Rif1	64	46.945	ENSOMEG00000021513	rif1	67	46.965	Oryzias_melastigma
ENSJJAG00000023000	Rif1	100	67.997	ENSOGAG00000006141	RIF1	99	68.118	Otolemur_garnettii
ENSJJAG00000023000	Rif1	100	69.827	ENSOARG00000008930	RIF1	99	69.625	Ovis_aries
ENSJJAG00000023000	Rif1	100	69.392	ENSPPAG00000023754	RIF1	99	69.352	Pan_paniscus
ENSJJAG00000023000	Rif1	100	68.730	ENSPPRG00000003618	RIF1	99	68.690	Panthera_pardus
ENSJJAG00000023000	Rif1	100	68.690	ENSPTIG00000020652	RIF1	99	68.650	Panthera_tigris_altaica
ENSJJAG00000023000	Rif1	100	69.472	ENSPTRG00000012534	RIF1	99	69.432	Pan_troglodytes
ENSJJAG00000023000	Rif1	100	69.613	ENSPANG00000008525	RIF1	99	69.693	Papio_anubis
ENSJJAG00000023000	Rif1	64	51.662	ENSPKIG00000004267	rif1	67	51.662	Paramormyrops_kingsleyae
ENSJJAG00000023000	Rif1	68	43.598	ENSPMGG00000016141	rif1	75	43.902	Periophthalmus_magnuspinnatus
ENSJJAG00000023000	Rif1	99	71.705	ENSPEMG00000000446	Rif1	98	71.892	Peromyscus_maniculatus_bairdii
ENSJJAG00000023000	Rif1	99	56.390	ENSPCIG00000009185	RIF1	99	56.477	Phascolarctos_cinereus
ENSJJAG00000023000	Rif1	51	49.439	ENSPFOG00000017804	rif1	52	49.439	Poecilia_formosa
ENSJJAG00000023000	Rif1	65	49.278	ENSPLAG00000017945	rif1	69	49.237	Poecilia_latipinna
ENSJJAG00000023000	Rif1	56	63.830	ENSPREG00000018052	rif1	66	51.467	Poecilia_reticulata
ENSJJAG00000023000	Rif1	100	69.476	ENSPPYG00000012846	RIF1	99	69.528	Pongo_abelii
ENSJJAG00000023000	Rif1	81	80.583	ENSPCAG00000009032	RIF1	80	80.583	Procavia_capensis
ENSJJAG00000023000	Rif1	100	70.733	ENSPCOG00000027888	RIF1	99	70.692	Propithecus_coquereli
ENSJJAG00000023000	Rif1	92	78.000	ENSPVAG00000014276	RIF1	95	78.000	Pteropus_vampyrus
ENSJJAG00000023000	Rif1	69	45.729	ENSPNYG00000012940	rif1	73	45.235	Pundamilia_nyererei
ENSJJAG00000023000	Rif1	100	68.503	ENSRNOG00000054901	Rif1	99	68.215	Rattus_norvegicus
ENSJJAG00000023000	Rif1	100	69.048	ENSRBIG00000003704	RIF1	99	69.209	Rhinopithecus_bieti
ENSJJAG00000023000	Rif1	100	69.774	ENSRROG00000028206	RIF1	99	69.935	Rhinopithecus_roxellana
ENSJJAG00000023000	Rif1	97	69.418	ENSSBOG00000029530	RIF1	99	69.201	Saimiri_boliviensis_boliviensis
ENSJJAG00000023000	Rif1	99	55.967	ENSSHAG00000018552	RIF1	77	58.047	Sarcophilus_harrisii
ENSJJAG00000023000	Rif1	66	50.348	ENSSFOG00015021539	rif1	73	49.206	Scleropages_formosus
ENSJJAG00000023000	Rif1	65	48.624	ENSSMAG00000011704	rif1	61	48.349	Scophthalmus_maximus
ENSJJAG00000023000	Rif1	64	48.826	ENSSDUG00000015632	rif1	72	46.244	Seriola_dumerili
ENSJJAG00000023000	Rif1	60	78.157	ENSSARG00000007161	-	59	78.157	Sorex_araneus
ENSJJAG00000023000	Rif1	96	68.278	ENSSPUG00000003062	RIF1	96	68.278	Sphenodon_punctatus
ENSJJAG00000023000	Rif1	55	59.275	ENSSPAG00000018359	rif1	82	59.275	Stegastes_partitus
ENSJJAG00000023000	Rif1	100	68.841	ENSSSCG00000016395	RIF1	99	68.680	Sus_scrofa
ENSJJAG00000023000	Rif1	55	45.700	ENSTNIG00000011538	rif1	53	47.562	Tetraodon_nigroviridis
ENSJJAG00000023000	Rif1	80	83.974	ENSTBEG00000016082	RIF1	80	83.974	Tupaia_belangeri
ENSJJAG00000023000	Rif1	100	70.097	ENSTTRG00000011190	RIF1	99	69.935	Tursiops_truncatus
ENSJJAG00000023000	Rif1	91	69.660	ENSUAMG00000026385	RIF1	99	69.482	Ursus_americanus
ENSJJAG00000023000	Rif1	100	69.738	ENSUMAG00000000337	RIF1	99	69.577	Ursus_maritimus
ENSJJAG00000023000	Rif1	100	67.810	ENSVPAG00000002162	RIF1	99	67.849	Vicugna_pacos
ENSJJAG00000023000	Rif1	100	68.502	ENSVVUG00000011293	RIF1	99	68.583	Vulpes_vulpes
ENSJJAG00000023000	Rif1	99	43.422	ENSXETG00000004530	rif1	70	44.760	Xenopus_tropicalis
ENSJJAG00000023000	Rif1	51	48.306	ENSXMAG00000000506	rif1	52	48.306	Xiphophorus_maculatus