EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000023049 (Gene tree)
Gene ID: 101602564
Gene Symbol: Parn
Alias: 1200003I18Rik|DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 178848 bases
Position: chrJH725443.1:13712049-13890896
Accession: 101602564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000023236	R3H	PF01424.22	3.8e-05	1	1
ENSJJAP00000023236	RNA_bind	PF08675.11	6.2e-33	1	1
ENSJJAP00000023236	CAF1	PF04857.20	2.1e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000029810	-	1881	XM_004652276	ENSJJAP00000023236	626 (aa)	XP_004652333	-

Gene Model

Click here to download ENSJJAG00000023049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000023049's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000023049	Parn	100	88.106	ENSG00000140694	PARN	100	98.305	Homo_sapiens
ENSJJAG00000023049	Parn	100	87.950	ENSAMEG00000011208	PARN	100	87.950	Ailuropoda_melanoleuca
ENSJJAG00000023049	Parn	87	73.091	ENSACIG00000000619	parn	85	73.091	Amphilophus_citrinellus
ENSJJAG00000023049	Parn	99	67.930	ENSAOCG00000003465	parn	83	72.664	Amphiprion_ocellaris
ENSJJAG00000023049	Parn	75	76.533	ENSAPEG00000010661	parn	91	76.533	Amphiprion_percula
ENSJJAG00000023049	Parn	91	74.520	ENSATEG00000004661	parn	83	73.966	Anabas_testudineus
ENSJJAG00000023049	Parn	99	80.507	ENSAPLG00000013914	PARN	99	80.507	Anas_platyrhynchos
ENSJJAG00000023049	Parn	100	74.923	ENSACAG00000004973	PARN	100	74.923	Anolis_carolinensis
ENSJJAG00000023049	Parn	100	87.324	ENSANAG00000031516	PARN	100	98.305	Aotus_nancymaae
ENSJJAG00000023049	Parn	91	74.346	ENSACLG00000004742	parn	84	74.346	Astatotilapia_calliptera
ENSJJAG00000023049	Parn	92	72.522	ENSAMXG00000012390	parn	94	70.435	Astyanax_mexicanus
ENSJJAG00000023049	Parn	100	86.207	ENSBTAG00000018097	PARN	100	87.868	Bos_taurus
ENSJJAG00000023049	Parn	100	87.793	ENSCJAG00000015866	PARN	100	98.305	Callithrix_jacchus
ENSJJAG00000023049	Parn	100	88.245	ENSCAFG00000018795	PARN	100	88.245	Canis_familiaris
ENSJJAG00000023049	Parn	100	88.245	ENSCAFG00020024126	PARN	100	88.245	Canis_lupus_dingo
ENSJJAG00000023049	Parn	100	88.558	ENSCHIG00000018143	PARN	100	88.558	Capra_hircus
ENSJJAG00000023049	Parn	75	61.331	ENSCAPG00000007984	PARN	78	61.331	Cavia_aperea
ENSJJAG00000023049	Parn	100	87.304	ENSCPOG00000002263	PARN	100	87.304	Cavia_porcellus
ENSJJAG00000023049	Parn	100	87.637	ENSCCAG00000030367	PARN	100	98.305	Cebus_capucinus
ENSJJAG00000023049	Parn	100	82.512	ENSCATG00000041368	PARN	100	98.305	Cercocebus_atys
ENSJJAG00000023049	Parn	100	86.991	ENSCLAG00000015406	PARN	99	86.991	Chinchilla_lanigera
ENSJJAG00000023049	Parn	100	88.576	ENSCSAG00000008142	PARN	100	88.576	Chlorocebus_sabaeus
ENSJJAG00000023049	Parn	99	71.474	ENSCHOG00000007014	PARN	100	71.474	Choloepus_hoffmanni
ENSJJAG00000023049	Parn	85	81.801	ENSCPBG00000006609	PARN	94	81.768	Chrysemys_picta_bellii
ENSJJAG00000023049	Parn	82	43.152	ENSCING00000010142	-	99	43.152	Ciona_intestinalis
ENSJJAG00000023049	Parn	100	77.744	ENSCANG00000028849	-	100	98.305	Colobus_angolensis_palliatus
ENSJJAG00000023049	Parn	100	86.867	ENSCGRG00001012096	Parn	100	86.867	Cricetulus_griseus_chok1gshd
ENSJJAG00000023049	Parn	100	86.867	ENSCGRG00000004939	Parn	100	86.867	Cricetulus_griseus_crigri
ENSJJAG00000023049	Parn	92	71.007	ENSCSEG00000002064	parn	100	63.348	Cynoglossus_semilaevis
ENSJJAG00000023049	Parn	91	72.964	ENSCVAG00000014848	parn	83	72.964	Cyprinodon_variegatus
ENSJJAG00000023049	Parn	100	63.231	ENSDARG00000102634	parn	100	60.185	Danio_rerio
ENSJJAG00000023049	Parn	100	87.931	ENSDNOG00000000833	PARN	96	93.358	Dasypus_novemcinctus
ENSJJAG00000023049	Parn	75	92.015	ENSETEG00000014828	-	69	92.015	Echinops_telfairi
ENSJJAG00000023049	Parn	54	51.170	ENSEBUG00000007052	PARN	70	68.000	Eptatretus_burgeri
ENSJJAG00000023049	Parn	100	88.715	ENSEASG00005011400	PARN	100	88.715	Equus_asinus_asinus
ENSJJAG00000023049	Parn	100	88.558	ENSECAG00000017792	PARN	100	88.558	Equus_caballus
ENSJJAG00000023049	Parn	76	90.741	ENSEEUG00000010370	PARN	77	90.741	Erinaceus_europaeus
ENSJJAG00000023049	Parn	90	72.438	ENSELUG00000013139	parn	74	72.438	Esox_lucius
ENSJJAG00000023049	Parn	100	88.871	ENSFCAG00000044961	PARN	100	98.305	Felis_catus
ENSJJAG00000023049	Parn	99	79.715	ENSFALG00000003911	PARN	98	79.715	Ficedula_albicollis
ENSJJAG00000023049	Parn	100	86.364	ENSFDAG00000009234	PARN	100	86.364	Fukomys_damarensis
ENSJJAG00000023049	Parn	92	65.372	ENSFHEG00000013738	parn	92	76.271	Fundulus_heteroclitus
ENSJJAG00000023049	Parn	85	74.813	ENSGMOG00000003231	parn	97	74.813	Gadus_morhua
ENSJJAG00000023049	Parn	100	78.931	ENSGALG00000003091	PARN	100	78.931	Gallus_gallus
ENSJJAG00000023049	Parn	90	72.491	ENSGAFG00000011061	parn	84	71.769	Gambusia_affinis
ENSJJAG00000023049	Parn	100	68.189	ENSGACG00000019501	parn	100	68.346	Gasterosteus_aculeatus
ENSJJAG00000023049	Parn	50	75.153	ENSGAGG00000023281	PARN	83	75.077	Gopherus_agassizii
ENSJJAG00000023049	Parn	97	88.245	ENSGGOG00000025224	PARN	100	98.305	Gorilla_gorilla
ENSJJAG00000023049	Parn	100	67.563	ENSHBUG00000017906	parn	100	67.563	Haplochromis_burtoni
ENSJJAG00000023049	Parn	100	86.207	ENSHGLG00000010886	PARN	100	86.207	Heterocephalus_glaber_female
ENSJJAG00000023049	Parn	100	86.207	ENSHGLG00100014659	PARN	100	86.207	Heterocephalus_glaber_male
ENSJJAG00000023049	Parn	86	70.534	ENSHCOG00000008683	parn	93	70.534	Hippocampus_comes
ENSJJAG00000023049	Parn	92	62.045	ENSIPUG00000012401	parn	87	62.045	Ictalurus_punctatus
ENSJJAG00000023049	Parn	100	88.401	ENSSTOG00000007519	PARN	100	88.401	Ictidomys_tridecemlineatus
ENSJJAG00000023049	Parn	92	72.603	ENSKMAG00000009462	parn	84	72.603	Kryptolebias_marmoratus
ENSJJAG00000023049	Parn	92	72.727	ENSLBEG00000009167	parn	90	72.727	Labrus_bergylta
ENSJJAG00000023049	Parn	80	77.381	ENSLACG00000004207	PARN	100	76.179	Latimeria_chalumnae
ENSJJAG00000023049	Parn	92	74.567	ENSLOCG00000000715	parn	85	74.048	Lepisosteus_oculatus
ENSJJAG00000023049	Parn	100	88.906	ENSLAFG00000015036	PARN	100	88.906	Loxodonta_africana
ENSJJAG00000023049	Parn	100	83.594	ENSMFAG00000044852	PARN	100	98.305	Macaca_fascicularis
ENSJJAG00000023049	Parn	100	88.106	ENSMMUG00000018849	PARN	100	98.305	Macaca_mulatta
ENSJJAG00000023049	Parn	100	88.263	ENSMNEG00000045108	PARN	100	98.305	Macaca_nemestrina
ENSJJAG00000023049	Parn	100	88.106	ENSMLEG00000031743	PARN	100	98.305	Mandrillus_leucophaeus
ENSJJAG00000023049	Parn	92	72.727	ENSMAMG00000006939	parn	84	72.727	Mastacembelus_armatus
ENSJJAG00000023049	Parn	100	67.670	ENSMZEG00005013590	parn	100	67.987	Maylandia_zebra
ENSJJAG00000023049	Parn	95	79.373	ENSMGAG00000001004	PARN	95	79.373	Meleagris_gallopavo
ENSJJAG00000023049	Parn	100	80.781	ENSMAUG00000008025	Parn	100	80.781	Mesocricetus_auratus
ENSJJAG00000023049	Parn	100	89.028	ENSMICG00000016053	PARN	100	100.000	Microcebus_murinus
ENSJJAG00000023049	Parn	79	90.283	ENSMOCG00000022211	Parn	100	90.283	Microtus_ochrogaster
ENSJJAG00000023049	Parn	100	66.614	ENSMMOG00000011333	parn	100	66.139	Mola_mola
ENSJJAG00000023049	Parn	79	91.129	ENSMODG00000004915	PARN	99	91.129	Monodelphis_domestica
ENSJJAG00000023049	Parn	85	77.654	ENSMALG00000019426	parn	91	77.654	Monopterus_albus
ENSJJAG00000023049	Parn	100	86.688	MGP_CAROLIEiJ_G0020466	Parn	100	86.688	Mus_caroli
ENSJJAG00000023049	Parn	100	86.688	ENSMUSG00000022685	Parn	100	95.122	Mus_musculus
ENSJJAG00000023049	Parn	100	86.846	MGP_PahariEiJ_G0016172	Parn	100	86.846	Mus_pahari
ENSJJAG00000023049	Parn	100	86.846	MGP_SPRETEiJ_G0021361	Parn	100	86.846	Mus_spretus
ENSJJAG00000023049	Parn	100	88.558	ENSMPUG00000014464	PARN	100	88.558	Mustela_putorius_furo
ENSJJAG00000023049	Parn	79	90.891	ENSMLUG00000005414	PARN	100	90.891	Myotis_lucifugus
ENSJJAG00000023049	Parn	100	67.460	ENSNBRG00000006805	parn	100	67.778	Neolamprologus_brichardi
ENSJJAG00000023049	Parn	100	88.263	ENSNLEG00000010241	PARN	100	98.305	Nomascus_leucogenys
ENSJJAG00000023049	Parn	99	58.003	ENSMEUG00000008178	-	100	58.003	Notamacropus_eugenii
ENSJJAG00000023049	Parn	99	83.835	ENSOPRG00000012187	PARN	100	83.835	Ochotona_princeps
ENSJJAG00000023049	Parn	100	80.666	ENSODEG00000001617	PARN	100	80.666	Octodon_degus
ENSJJAG00000023049	Parn	100	69.029	ENSONIG00000000151	parn	100	69.029	Oreochromis_niloticus
ENSJJAG00000023049	Parn	58	77.926	ENSOANG00000020155	-	97	78.042	Ornithorhynchus_anatinus
ENSJJAG00000023049	Parn	99	87.874	ENSOCUG00000000322	PARN	100	87.874	Oryctolagus_cuniculus
ENSJJAG00000023049	Parn	92	72.759	ENSORLG00020010313	parn	86	72.759	Oryzias_latipes_hni
ENSJJAG00000023049	Parn	92	71.897	ENSORLG00015000300	parn	86	71.897	Oryzias_latipes_hsok
ENSJJAG00000023049	Parn	92	72.069	ENSOMEG00000019555	parn	97	66.063	Oryzias_melastigma
ENSJJAG00000023049	Parn	79	90.505	ENSOGAG00000014626	PARN	100	90.505	Otolemur_garnettii
ENSJJAG00000023049	Parn	79	93.927	ENSOARG00000007574	PARN	100	93.927	Ovis_aries
ENSJJAG00000023049	Parn	100	87.793	ENSPPAG00000031438	PARN	100	98.305	Pan_paniscus
ENSJJAG00000023049	Parn	100	88.715	ENSPPRG00000018583	PARN	100	98.305	Panthera_pardus
ENSJJAG00000023049	Parn	100	88.715	ENSPTIG00000012135	PARN	100	98.305	Panthera_tigris_altaica
ENSJJAG00000023049	Parn	100	87.793	ENSPTRG00000007792	PARN	100	98.305	Pan_troglodytes
ENSJJAG00000023049	Parn	100	85.290	ENSPANG00000020099	PARN	100	98.305	Papio_anubis
ENSJJAG00000023049	Parn	93	72.479	ENSPKIG00000022807	parn	95	66.446	Paramormyrops_kingsleyae
ENSJJAG00000023049	Parn	95	81.488	ENSPSIG00000014804	PARN	100	78.856	Pelodiscus_sinensis
ENSJJAG00000023049	Parn	82	75.292	ENSPMGG00000014431	parn	74	73.832	Periophthalmus_magnuspinnatus
ENSJJAG00000023049	Parn	100	85.103	ENSPEMG00000018439	Parn	100	85.103	Peromyscus_maniculatus_bairdii
ENSJJAG00000023049	Parn	83	66.923	ENSPMAG00000003956	parn	99	66.923	Petromyzon_marinus
ENSJJAG00000023049	Parn	67	84.161	ENSPCIG00000001259	PARN	91	93.220	Phascolarctos_cinereus
ENSJJAG00000023049	Parn	90	72.917	ENSPFOG00000012823	parn	84	72.355	Poecilia_formosa
ENSJJAG00000023049	Parn	90	73.090	ENSPLAG00000006395	parn	84	72.526	Poecilia_latipinna
ENSJJAG00000023049	Parn	90	73.090	ENSPMEG00000007711	parn	84	72.355	Poecilia_mexicana
ENSJJAG00000023049	Parn	90	72.743	ENSPREG00000000147	parn	84	72.014	Poecilia_reticulata
ENSJJAG00000023049	Parn	100	87.676	ENSPPYG00000007123	PARN	100	87.676	Pongo_abelii
ENSJJAG00000023049	Parn	95	77.025	ENSPCAG00000001741	PARN	100	77.025	Procavia_capensis
ENSJJAG00000023049	Parn	100	86.520	ENSPCOG00000019292	PARN	100	100.000	Propithecus_coquereli
ENSJJAG00000023049	Parn	99	84.311	ENSPVAG00000002547	PARN	100	84.311	Pteropus_vampyrus
ENSJJAG00000023049	Parn	91	74.346	ENSPNYG00000006835	parn	100	65.190	Pundamilia_nyererei
ENSJJAG00000023049	Parn	84	72.467	ENSPNAG00000018905	parn	85	72.467	Pygocentrus_nattereri
ENSJJAG00000023049	Parn	100	83.821	ENSRNOG00000002912	Parn	97	90.816	Rattus_norvegicus
ENSJJAG00000023049	Parn	51	81.081	ENSRBIG00000018726	PARN	100	81.081	Rhinopithecus_bieti
ENSJJAG00000023049	Parn	51	81.081	ENSRROG00000011162	-	100	81.081	Rhinopithecus_roxellana
ENSJJAG00000023049	Parn	100	86.072	ENSSBOG00000034726	PARN	100	98.305	Saimiri_boliviensis_boliviensis
ENSJJAG00000023049	Parn	67	90.191	ENSSHAG00000008493	PARN	94	90.191	Sarcophilus_harrisii
ENSJJAG00000023049	Parn	96	72.000	ENSSFOG00015014165	parn	92	72.906	Scleropages_formosus
ENSJJAG00000023049	Parn	98	68.277	ENSSMAG00000000685	parn	100	63.339	Scophthalmus_maximus
ENSJJAG00000023049	Parn	91	73.484	ENSSDUG00000014555	parn	83	73.484	Seriola_dumerili
ENSJJAG00000023049	Parn	82	91.935	ENSSARG00000014339	PARN	89	91.935	Sorex_araneus
ENSJJAG00000023049	Parn	100	80.094	ENSSPUG00000007719	PARN	100	80.094	Sphenodon_punctatus
ENSJJAG00000023049	Parn	99	68.545	ENSSPAG00000007095	parn	86	73.408	Stegastes_partitus
ENSJJAG00000023049	Parn	100	87.774	ENSSSCG00000007878	PARN	89	87.774	Sus_scrofa
ENSJJAG00000023049	Parn	99	79.463	ENSTGUG00000004971	PARN	99	79.463	Taeniopygia_guttata
ENSJJAG00000023049	Parn	100	68.858	ENSTNIG00000008252	parn	100	69.014	Tetraodon_nigroviridis
ENSJJAG00000023049	Parn	91	74.611	ENSTBEG00000010407	PARN	100	74.611	Tupaia_belangeri
ENSJJAG00000023049	Parn	99	83.994	ENSTTRG00000002843	PARN	100	83.994	Tursiops_truncatus
ENSJJAG00000023049	Parn	69	80.275	ENSUAMG00000008283	PARN	90	80.275	Ursus_americanus
ENSJJAG00000023049	Parn	100	88.401	ENSUMAG00000004527	PARN	100	88.401	Ursus_maritimus
ENSJJAG00000023049	Parn	96	85.458	ENSVPAG00000008968	PARN	99	85.458	Vicugna_pacos
ENSJJAG00000023049	Parn	100	88.558	ENSVVUG00000019509	PARN	100	88.558	Vulpes_vulpes
ENSJJAG00000023049	Parn	100	71.944	ENSXETG00000010994	parn	100	80.608	Xenopus_tropicalis
ENSJJAG00000023049	Parn	90	69.217	ENSXCOG00000015990	parn	96	68.547	Xiphophorus_couchianus
ENSJJAG00000023049	Parn	92	71.843	ENSXMAG00000014783	parn	84	71.843	Xiphophorus_maculatus