EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000023158 (Gene tree)
Gene ID: 101613494
Gene Symbol: -
Alias: -
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 11771 bases
Position: chrJH725442.1:47850916-47862686
Accession: 101613494
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000023380	RRM_1	PF00076.22	6.9e-15	1	1
ENSJJAP00000023380	RRM_3	PF08777.11	9.5e-28	1	1
ENSJJAP00000023380	La	PF05383.17	3.7e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000029957	-	1248	XM_004673222	ENSJJAP00000023380	415 (aa)	XP_004673279	-

Gene Model

Click here to download ENSJJAG00000023158's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000023158's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000023158	-	100	76.442	ENSJJAG00000016250	-	100	76.442

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000023158	-	100	80.282	ENSG00000138385	SSB	100	94.565	Homo_sapiens
ENSJJAG00000023158	-	99	51.319	ENSAPOG00000003448	ssb	100	51.675	Acanthochromis_polyacanthus
ENSJJAG00000023158	-	100	79.717	ENSAMEG00000010507	SSB	100	79.717	Ailuropoda_melanoleuca
ENSJJAG00000023158	-	93	50.129	ENSACIG00000001738	ssb	88	61.789	Amphilophus_citrinellus
ENSJJAG00000023158	-	99	51.559	ENSAOCG00000020398	ssb	100	51.914	Amphiprion_ocellaris
ENSJJAG00000023158	-	99	51.799	ENSAPEG00000020395	ssb	100	52.153	Amphiprion_percula
ENSJJAG00000023158	-	99	52.029	ENSATEG00000016884	ssb	100	52.029	Anabas_testudineus
ENSJJAG00000023158	-	100	64.941	ENSAPLG00000006109	SSB	100	65.728	Anas_platyrhynchos
ENSJJAG00000023158	-	100	57.009	ENSACAG00000017008	SSB	99	57.009	Anolis_carolinensis
ENSJJAG00000023158	-	100	71.395	ENSANAG00000027195	-	100	72.577	Aotus_nancymaae
ENSJJAG00000023158	-	99	49.524	ENSACLG00000010798	ssb	100	49.524	Astatotilapia_calliptera
ENSJJAG00000023158	-	99	50.235	ENSAMXG00000012606	ssb	100	50.820	Astyanax_mexicanus
ENSJJAG00000023158	-	100	79.433	ENSBTAG00000008716	SSB	100	79.433	Bos_taurus
ENSJJAG00000023158	-	71	33.887	WBGene00016653	C44E4.4	76	34.768	Caenorhabditis_elegans
ENSJJAG00000023158	-	100	80.378	ENSCJAG00000045073	SSB	85	95.652	Callithrix_jacchus
ENSJJAG00000023158	-	100	79.245	ENSCAFG00000012418	SSB	100	79.245	Canis_familiaris
ENSJJAG00000023158	-	100	79.245	ENSCAFG00020002900	SSB	100	79.245	Canis_lupus_dingo
ENSJJAG00000023158	-	100	79.433	ENSCHIG00000022624	-	100	79.433	Capra_hircus
ENSJJAG00000023158	-	100	76.019	ENSCHIG00000022196	-	100	76.019	Capra_hircus
ENSJJAG00000023158	-	100	80.142	ENSTSYG00000000097	SSB	100	81.087	Carlito_syrichta
ENSJJAG00000023158	-	100	81.928	ENSCPOG00000003338	SSB	100	81.928	Cavia_porcellus
ENSJJAG00000023158	-	100	81.087	ENSCCAG00000035147	SSB	86	96.522	Cebus_capucinus
ENSJJAG00000023158	-	100	60.047	ENSCATG00000036701	SSB	100	60.047	Cercocebus_atys
ENSJJAG00000023158	-	100	58.294	ENSCATG00000042909	-	100	58.294	Cercocebus_atys
ENSJJAG00000023158	-	100	80.378	ENSCLAG00000015617	-	100	80.378	Chinchilla_lanigera
ENSJJAG00000023158	-	100	80.378	ENSCSAG00000015200	SSB	89	80.378	Chlorocebus_sabaeus
ENSJJAG00000023158	-	98	74.638	ENSCSAG00000018390	-	100	74.638	Chlorocebus_sabaeus
ENSJJAG00000023158	-	100	79.669	ENSCHOG00000007763	SSB	100	79.669	Choloepus_hoffmanni
ENSJJAG00000023158	-	100	65.574	ENSCPBG00000006519	SSB	100	67.213	Chrysemys_picta_bellii
ENSJJAG00000023158	-	100	68.246	ENSCANG00000033240	-	100	68.246	Colobus_angolensis_palliatus
ENSJJAG00000023158	-	98	62.740	ENSCANG00000028838	-	95	62.740	Colobus_angolensis_palliatus
ENSJJAG00000023158	-	100	80.378	ENSCANG00000027695	SSB	100	80.378	Colobus_angolensis_palliatus
ENSJJAG00000023158	-	100	79.762	ENSCGRG00001024831	Ssb	100	81.429	Cricetulus_griseus_chok1gshd
ENSJJAG00000023158	-	100	79.762	ENSCGRG00000005387	Ssb	100	81.429	Cricetulus_griseus_crigri
ENSJJAG00000023158	-	98	52.038	ENSCSEG00000011599	ssb	99	52.392	Cynoglossus_semilaevis
ENSJJAG00000023158	-	99	51.074	ENSCVAG00000021558	ssb	100	51.429	Cyprinodon_variegatus
ENSJJAG00000023158	-	98	50.358	ENSDARG00000029252	ssb	99	50.952	Danio_rerio
ENSJJAG00000023158	-	100	80.142	ENSDNOG00000013450	SSB	100	80.142	Dasypus_novemcinctus
ENSJJAG00000023158	-	100	80.723	ENSDORG00000005543	Ssb	100	80.723	Dipodomys_ordii
ENSJJAG00000023158	-	73	33.968	FBgn0011638	La	78	34.783	Drosophila_melanogaster
ENSJJAG00000023158	-	76	46.688	ENSEBUG00000001237	ssb	92	41.979	Eptatretus_burgeri
ENSJJAG00000023158	-	99	80.952	ENSEASG00005022835	SSB	99	80.952	Equus_asinus_asinus
ENSJJAG00000023158	-	100	80.615	ENSECAG00000018495	SSB	100	80.615	Equus_caballus
ENSJJAG00000023158	-	73	73.026	ENSEEUG00000008077	SSB	78	73.026	Erinaceus_europaeus
ENSJJAG00000023158	-	99	51.069	ENSELUG00000020929	ssb	100	52.844	Esox_lucius
ENSJJAG00000023158	-	100	79.717	ENSFCAG00000011601	SSB	100	79.717	Felis_catus
ENSJJAG00000023158	-	99	62.708	ENSFALG00000000930	SSB	99	65.083	Ficedula_albicollis
ENSJJAG00000023158	-	100	80.615	ENSFDAG00000000598	SSB	100	80.615	Fukomys_damarensis
ENSJJAG00000023158	-	74	46.774	ENSFHEG00000003268	ssb	96	48.171	Fundulus_heteroclitus
ENSJJAG00000023158	-	97	50.000	ENSGMOG00000002664	ssb	99	50.488	Gadus_morhua
ENSJJAG00000023158	-	99	64.303	ENSGALG00000009677	SSB	99	64.539	Gallus_gallus
ENSJJAG00000023158	-	99	48.815	ENSGAFG00000002749	ssb	100	49.645	Gambusia_affinis
ENSJJAG00000023158	-	99	49.165	ENSGACG00000005107	ssb	100	50.119	Gasterosteus_aculeatus
ENSJJAG00000023158	-	100	65.105	ENSGAGG00000007807	SSB	100	66.745	Gopherus_agassizii
ENSJJAG00000023158	-	100	66.667	ENSGGOG00000024891	-	100	66.667	Gorilla_gorilla
ENSJJAG00000023158	-	64	75.758	ENSGGOG00000023471	-	100	75.758	Gorilla_gorilla
ENSJJAG00000023158	-	99	49.048	ENSHBUG00000006584	ssb	100	49.048	Haplochromis_burtoni
ENSJJAG00000023158	-	100	74.341	ENSHGLG00000005832	-	100	74.341	Heterocephalus_glaber_female
ENSJJAG00000023158	-	100	80.615	ENSHGLG00000017580	-	100	80.615	Heterocephalus_glaber_female
ENSJJAG00000023158	-	100	72.471	ENSHGLG00000004478	-	100	72.471	Heterocephalus_glaber_female
ENSJJAG00000023158	-	100	70.024	ENSHGLG00100008767	-	100	70.024	Heterocephalus_glaber_male
ENSJJAG00000023158	-	100	80.615	ENSHGLG00100003084	-	100	80.615	Heterocephalus_glaber_male
ENSJJAG00000023158	-	98	48.309	ENSHCOG00000019011	ssb	99	48.792	Hippocampus_comes
ENSJJAG00000023158	-	99	51.748	ENSIPUG00000003681	SSB	100	52.093	Ictalurus_punctatus
ENSJJAG00000023158	-	100	81.087	ENSSTOG00000008416	SSB	100	81.087	Ictidomys_tridecemlineatus
ENSJJAG00000023158	-	99	51.799	ENSKMAG00000017317	ssb	100	51.799	Kryptolebias_marmoratus
ENSJJAG00000023158	-	99	50.120	ENSLBEG00000017345	ssb	100	50.120	Labrus_bergylta
ENSJJAG00000023158	-	99	60.941	ENSLACG00000014056	SSB	99	61.176	Latimeria_chalumnae
ENSJJAG00000023158	-	98	57.177	ENSLOCG00000007933	ssb	99	57.416	Lepisosteus_oculatus
ENSJJAG00000023158	-	73	64.356	ENSLAFG00000026721	-	99	64.356	Loxodonta_africana
ENSJJAG00000023158	-	100	77.358	ENSLAFG00000000867	-	100	78.302	Loxodonta_africana
ENSJJAG00000023158	-	100	66.430	ENSLAFG00000028909	-	100	66.430	Loxodonta_africana
ENSJJAG00000023158	-	90	72.386	ENSMFAG00000041478	-	100	72.386	Macaca_fascicularis
ENSJJAG00000023158	-	100	80.615	ENSMFAG00000039066	SSB	85	96.522	Macaca_fascicularis
ENSJJAG00000023158	-	100	69.359	ENSMMUG00000011724	-	97	69.359	Macaca_mulatta
ENSJJAG00000023158	-	99	54.762	ENSMMUG00000039889	-	100	55.238	Macaca_mulatta
ENSJJAG00000023158	-	100	80.615	ENSMMUG00000023051	SSB	85	96.522	Macaca_mulatta
ENSJJAG00000023158	-	100	68.925	ENSMNEG00000028321	SSB	85	96.522	Macaca_nemestrina
ENSJJAG00000023158	-	90	72.386	ENSMNEG00000034698	-	100	72.386	Macaca_nemestrina
ENSJJAG00000023158	-	100	80.615	ENSMLEG00000035717	SSB	88	96.522	Mandrillus_leucophaeus
ENSJJAG00000023158	-	100	58.554	ENSMLEG00000042644	-	100	58.554	Mandrillus_leucophaeus
ENSJJAG00000023158	-	99	52.632	ENSMAMG00000004800	ssb	100	52.983	Mastacembelus_armatus
ENSJJAG00000023158	-	99	49.524	ENSMZEG00005005749	ssb	100	49.524	Maylandia_zebra
ENSJJAG00000023158	-	99	64.303	ENSMGAG00000010328	SSB	95	76.020	Meleagris_gallopavo
ENSJJAG00000023158	-	99	79.762	ENSMICG00000028252	-	99	80.714	Microcebus_murinus
ENSJJAG00000023158	-	98	74.817	ENSMICG00000033304	-	96	76.962	Microcebus_murinus
ENSJJAG00000023158	-	100	55.107	ENSMODG00000007027	-	100	56.295	Monodelphis_domestica
ENSJJAG00000023158	-	100	58.195	ENSMODG00000019271	-	100	58.195	Monodelphis_domestica
ENSJJAG00000023158	-	100	68.825	ENSMODG00000008227	-	100	69.928	Monodelphis_domestica
ENSJJAG00000023158	-	80	55.556	ENSMALG00000008045	ssb	89	51.813	Monopterus_albus
ENSJJAG00000023158	-	100	79.856	MGP_CAROLIEiJ_G0023629	-	100	92.391	Mus_caroli
ENSJJAG00000023158	-	100	79.856	ENSMUSG00000068882	Ssb	100	92.935	Mus_musculus
ENSJJAG00000023158	-	100	79.856	MGP_PahariEiJ_G0025081	-	100	92.935	Mus_pahari
ENSJJAG00000023158	-	100	79.856	MGP_SPRETEiJ_G0024551	Ssb	100	92.935	Mus_spretus
ENSJJAG00000023158	-	100	79.905	ENSMPUG00000000785	SSB	100	79.905	Mustela_putorius_furo
ENSJJAG00000023158	-	100	81.429	ENSMLUG00000016316	SSB	100	81.429	Myotis_lucifugus
ENSJJAG00000023158	-	99	49.169	ENSNBRG00000012661	ssb	100	49.169	Neolamprologus_brichardi
ENSJJAG00000023158	-	100	80.851	ENSNLEG00000004958	SSB	86	96.522	Nomascus_leucogenys
ENSJJAG00000023158	-	100	59.716	ENSNLEG00000028754	-	100	60.900	Nomascus_leucogenys
ENSJJAG00000023158	-	59	80.645	ENSMEUG00000001650	-	100	80.645	Notamacropus_eugenii
ENSJJAG00000023158	-	51	87.097	ENSOPRG00000008475	-	100	58.766	Ochotona_princeps
ENSJJAG00000023158	-	93	77.436	ENSODEG00000004202	-	100	77.436	Octodon_degus
ENSJJAG00000023158	-	99	48.694	ENSONIG00000008776	ssb	100	48.694	Oreochromis_niloticus
ENSJJAG00000023158	-	100	70.922	ENSOANG00000008543	SSB	100	71.631	Ornithorhynchus_anatinus
ENSJJAG00000023158	-	100	80.615	ENSOCUG00000010396	SSB	100	80.615	Oryctolagus_cuniculus
ENSJJAG00000023158	-	99	51.429	ENSORLG00000017208	ssb	100	51.429	Oryzias_latipes
ENSJJAG00000023158	-	99	51.069	ENSORLG00020022574	ssb	100	51.544	Oryzias_latipes_hni
ENSJJAG00000023158	-	99	51.190	ENSORLG00015016592	ssb	100	51.190	Oryzias_latipes_hsok
ENSJJAG00000023158	-	99	51.544	ENSOMEG00000003193	ssb	100	51.781	Oryzias_melastigma
ENSJJAG00000023158	-	100	78.487	ENSOGAG00000029768	SSB	100	78.487	Otolemur_garnettii
ENSJJAG00000023158	-	100	78.251	ENSOARG00000002906	SSB	100	78.960	Ovis_aries
ENSJJAG00000023158	-	100	80.282	ENSPPAG00000042673	SSB	86	96.522	Pan_paniscus
ENSJJAG00000023158	-	97	61.220	ENSPPAG00000006189	-	93	65.344	Pan_paniscus
ENSJJAG00000023158	-	99	65.166	ENSPPAG00000032427	-	100	84.496	Pan_paniscus
ENSJJAG00000023158	-	100	79.717	ENSPPRG00000006599	SSB	100	79.717	Panthera_pardus
ENSJJAG00000023158	-	100	79.481	ENSPTIG00000011021	SSB	97	79.481	Panthera_tigris_altaica
ENSJJAG00000023158	-	100	80.282	ENSPTRG00000012620	SSB	86	96.522	Pan_troglodytes
ENSJJAG00000023158	-	99	62.233	ENSPTRG00000042880	-	99	62.233	Pan_troglodytes
ENSJJAG00000023158	-	98	56.280	ENSPANG00000031877	-	95	56.280	Papio_anubis
ENSJJAG00000023158	-	100	57.957	ENSPANG00000034126	-	100	58.432	Papio_anubis
ENSJJAG00000023158	-	100	80.615	ENSPANG00000007440	SSB	85	96.522	Papio_anubis
ENSJJAG00000023158	-	99	55.213	ENSPKIG00000019325	ssb	100	55.556	Paramormyrops_kingsleyae
ENSJJAG00000023158	-	100	62.529	ENSPSIG00000002265	SSB	93	64.403	Pelodiscus_sinensis
ENSJJAG00000023158	-	69	52.740	ENSPMGG00000020075	ssb	90	48.468	Periophthalmus_magnuspinnatus
ENSJJAG00000023158	-	79	48.171	ENSPMAG00000002982	ssb	88	43.687	Petromyzon_marinus
ENSJJAG00000023158	-	100	67.849	ENSPCIG00000028591	-	100	70.047	Phascolarctos_cinereus
ENSJJAG00000023158	-	99	50.597	ENSPFOG00000009650	ssb	100	51.190	Poecilia_formosa
ENSJJAG00000023158	-	79	55.422	ENSPLAG00000020498	ssb	100	51.190	Poecilia_latipinna
ENSJJAG00000023158	-	99	50.358	ENSPMEG00000001051	ssb	100	50.952	Poecilia_mexicana
ENSJJAG00000023158	-	95	50.503	ENSPREG00000003708	ssb	97	51.538	Poecilia_reticulata
ENSJJAG00000023158	-	100	80.851	ENSPPYG00000012919	SSB	100	80.851	Pongo_abelii
ENSJJAG00000023158	-	95	73.317	ENSPCAG00000010276	SSB	100	75.561	Procavia_capensis
ENSJJAG00000023158	-	100	76.247	ENSPCOG00000015741	-	92	90.517	Propithecus_coquereli
ENSJJAG00000023158	-	100	68.558	ENSPCOG00000023189	-	100	69.504	Propithecus_coquereli
ENSJJAG00000023158	-	88	81.967	ENSPVAG00000006615	SSB	98	81.967	Pteropus_vampyrus
ENSJJAG00000023158	-	99	49.524	ENSPNYG00000006444	ssb	100	49.524	Pundamilia_nyererei
ENSJJAG00000023158	-	78	58.663	ENSPNAG00000011708	ssb	100	51.981	Pygocentrus_nattereri
ENSJJAG00000023158	-	100	80.096	ENSRNOG00000011606	AABR07061825.1	100	80.096	Rattus_norvegicus
ENSJJAG00000023158	-	100	81.535	ENSRNOG00000007998	Ssb	100	81.535	Rattus_norvegicus
ENSJJAG00000023158	-	94	67.172	ENSRBIG00000041232	-	84	82.090	Rhinopithecus_bieti
ENSJJAG00000023158	-	100	56.974	ENSRBIG00000029918	-	100	56.974	Rhinopithecus_bieti
ENSJJAG00000023158	-	100	67.371	ENSRBIG00000041972	SSB	88	96.522	Rhinopithecus_bieti
ENSJJAG00000023158	-	89	71.579	ENSRBIG00000041608	-	98	71.579	Rhinopithecus_bieti
ENSJJAG00000023158	-	89	75.263	ENSRROG00000034102	-	98	71.154	Rhinopithecus_roxellana
ENSJJAG00000023158	-	100	65.721	ENSRROG00000007149	-	100	65.721	Rhinopithecus_roxellana
ENSJJAG00000023158	-	100	80.378	ENSRROG00000040346	SSB	85	96.522	Rhinopithecus_roxellana
ENSJJAG00000023158	-	98	68.523	ENSRROG00000031684	-	86	84.247	Rhinopithecus_roxellana
ENSJJAG00000023158	-	100	81.087	ENSSBOG00000027204	SSB	86	96.522	Saimiri_boliviensis_boliviensis
ENSJJAG00000023158	-	100	67.612	ENSSHAG00000018062	SSB	100	69.811	Sarcophilus_harrisii
ENSJJAG00000023158	-	99	56.808	ENSSFOG00015000550	ssb	100	57.845	Scleropages_formosus
ENSJJAG00000023158	-	99	48.910	ENSSMAG00000013885	ssb	99	50.758	Scophthalmus_maximus
ENSJJAG00000023158	-	99	51.914	ENSSDUG00000020117	ssb	100	52.267	Seriola_dumerili
ENSJJAG00000023158	-	99	50.966	ENSSLDG00000002525	ssb	100	51.084	Seriola_lalandi_dorsalis
ENSJJAG00000023158	-	95	71.571	ENSSARG00000007747	SSB	100	71.571	Sorex_araneus
ENSJJAG00000023158	-	100	64.554	ENSSPUG00000012112	SSB	100	66.197	Sphenodon_punctatus
ENSJJAG00000023158	-	99	52.632	ENSSPAG00000005696	ssb	100	52.632	Stegastes_partitus
ENSJJAG00000023158	-	96	71.642	ENSSSCG00000015938	SSB	96	73.449	Sus_scrofa
ENSJJAG00000023158	-	99	62.175	ENSTGUG00000007942	SSB	99	64.539	Taeniopygia_guttata
ENSJJAG00000023158	-	99	52.278	ENSTRUG00000017839	ssb	100	52.632	Takifugu_rubripes
ENSJJAG00000023158	-	92	52.850	ENSTNIG00000000915	ssb	100	52.850	Tetraodon_nigroviridis
ENSJJAG00000023158	-	83	96.522	ENSTBEG00000009056	SSB	82	96.522	Tupaia_belangeri
ENSJJAG00000023158	-	100	79.905	ENSTTRG00000002152	SSB	100	79.905	Tursiops_truncatus
ENSJJAG00000023158	-	93	83.204	ENSUAMG00000027833	SSB	97	83.204	Ursus_americanus
ENSJJAG00000023158	-	100	79.481	ENSUMAG00000013907	SSB	100	79.481	Ursus_maritimus
ENSJJAG00000023158	-	100	80.142	ENSVPAG00000007183	SSB	100	80.142	Vicugna_pacos
ENSJJAG00000023158	-	100	79.245	ENSVVUG00000016573	SSB	78	79.245	Vulpes_vulpes
ENSJJAG00000023158	-	99	50.676	ENSXETG00000025402	ssb	100	52.252	Xenopus_tropicalis
ENSJJAG00000023158	-	98	49.389	ENSXCOG00000019109	ssb	93	61.719	Xiphophorus_couchianus
ENSJJAG00000023158	-	99	49.882	ENSXMAG00000004888	ssb	100	49.882	Xiphophorus_maculatus