EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000023186 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: C1D nuclear receptor corepressor
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 5996 bases
Position: chrJH725470.1:1601819-1607814
Accession: 101604366
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000023418	Sas10_Utp3	PF04000.15	3.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000029995	-	396	XM_012949121	ENSJJAP00000023418	131 (aa)	XP_012804575	-

Gene Model

Click here to download ENSJJAG00000023186's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000023186's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000023186	-	99	83.077	ENSJJAG00000005044	-	91	83.077
ENSJJAG00000023186	-	89	81.197	ENSJJAG00000016086	-	83	81.197
ENSJJAG00000023186	-	99	88.462	ENSJJAG00000009540	-	91	88.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000023186	-	99	80.769	ENSG00000197223	C1D	89	80.769	Homo_sapiens
ENSJJAG00000023186	-	89	66.667	ENSAPOG00000005466	c1d	79	66.667	Acanthochromis_polyacanthus
ENSJJAG00000023186	-	99	81.538	ENSAMEG00000004859	C1D	86	81.538	Ailuropoda_melanoleuca
ENSJJAG00000023186	-	98	63.566	ENSACIG00000012684	c1d	81	63.566	Amphilophus_citrinellus
ENSJJAG00000023186	-	86	66.372	ENSAOCG00000020354	c1d	77	66.372	Amphiprion_ocellaris
ENSJJAG00000023186	-	86	67.257	ENSAPEG00000001403	c1d	73	67.257	Amphiprion_percula
ENSJJAG00000023186	-	89	66.667	ENSATEG00000012922	c1d	75	66.667	Anabas_testudineus
ENSJJAG00000023186	-	96	68.504	ENSAPLG00000009320	C1D	85	68.504	Anas_platyrhynchos
ENSJJAG00000023186	-	93	73.770	ENSACAG00000001337	C1D	97	73.770	Anolis_carolinensis
ENSJJAG00000023186	-	99	80.000	ENSANAG00000035972	-	89	80.000	Aotus_nancymaae
ENSJJAG00000023186	-	99	76.923	ENSANAG00000005773	-	89	76.923	Aotus_nancymaae
ENSJJAG00000023186	-	89	67.241	ENSACLG00000026206	c1d	83	63.281	Astatotilapia_calliptera
ENSJJAG00000023186	-	89	65.812	ENSAMXG00000043212	c1d	80	65.812	Astyanax_mexicanus
ENSJJAG00000023186	-	99	80.769	ENSBTAG00000049002	C1D	89	80.769	Bos_taurus
ENSJJAG00000023186	-	99	80.769	ENSCJAG00000006589	C1D	83	80.769	Callithrix_jacchus
ENSJJAG00000023186	-	90	77.119	ENSCJAG00000044668	-	92	77.119	Callithrix_jacchus
ENSJJAG00000023186	-	99	80.000	ENSCAFG00000030099	C1D	89	80.000	Canis_familiaris
ENSJJAG00000023186	-	99	80.000	ENSCAFG00020026997	C1D	89	80.000	Canis_lupus_dingo
ENSJJAG00000023186	-	99	80.769	ENSCHIG00000025729	C1D	89	80.769	Capra_hircus
ENSJJAG00000023186	-	90	81.356	ENSTSYG00000026573	-	75	81.356	Carlito_syrichta
ENSJJAG00000023186	-	99	80.769	ENSTSYG00000035739	-	89	80.769	Carlito_syrichta
ENSJJAG00000023186	-	86	77.876	ENSCAPG00000011523	-	94	77.876	Cavia_aperea
ENSJJAG00000023186	-	86	78.761	ENSCPOG00000020112	-	94	78.761	Cavia_porcellus
ENSJJAG00000023186	-	99	79.231	ENSCPOG00000037986	-	89	79.231	Cavia_porcellus
ENSJJAG00000023186	-	99	80.769	ENSCCAG00000030405	-	89	80.769	Cebus_capucinus
ENSJJAG00000023186	-	99	76.923	ENSCATG00000043348	-	89	76.923	Cercocebus_atys
ENSJJAG00000023186	-	99	80.769	ENSCATG00000045336	C1D	89	80.769	Cercocebus_atys
ENSJJAG00000023186	-	99	80.769	ENSCLAG00000011883	C1D	89	80.769	Chinchilla_lanigera
ENSJJAG00000023186	-	99	80.769	ENSCSAG00000014811	C1D	89	80.769	Chlorocebus_sabaeus
ENSJJAG00000023186	-	99	81.538	ENSCHOG00000006719	C1D	70	81.538	Choloepus_hoffmanni
ENSJJAG00000023186	-	99	71.756	ENSCPBG00000014451	C1D	86	71.756	Chrysemys_picta_bellii
ENSJJAG00000023186	-	88	44.348	ENSCING00000020906	-	60	44.348	Ciona_intestinalis
ENSJJAG00000023186	-	83	47.706	ENSCSAVG00000000150	-	62	47.706	Ciona_savignyi
ENSJJAG00000023186	-	82	80.374	ENSCANG00000036599	-	87	80.374	Colobus_angolensis_palliatus
ENSJJAG00000023186	-	99	80.000	ENSCANG00000035564	C1D	89	80.000	Colobus_angolensis_palliatus
ENSJJAG00000023186	-	99	81.538	ENSCGRG00001023376	C1d	89	81.538	Cricetulus_griseus_chok1gshd
ENSJJAG00000023186	-	99	81.538	ENSCGRG00000010245	C1d	89	81.538	Cricetulus_griseus_crigri
ENSJJAG00000023186	-	99	56.923	ENSCSEG00000000587	c1d	88	56.923	Cynoglossus_semilaevis
ENSJJAG00000023186	-	95	60.484	ENSCVAG00000004603	c1d	79	60.484	Cyprinodon_variegatus
ENSJJAG00000023186	-	89	64.957	ENSDARG00000021112	c1d	79	64.957	Danio_rerio
ENSJJAG00000023186	-	99	74.615	ENSDNOG00000046068	-	89	74.615	Dasypus_novemcinctus
ENSJJAG00000023186	-	99	80.000	ENSDORG00000003300	C1d	89	80.000	Dipodomys_ordii
ENSJJAG00000023186	-	64	80.952	ENSETEG00000014857	C1D	84	80.952	Echinops_telfairi
ENSJJAG00000023186	-	96	52.381	ENSEBUG00000006874	c1d	77	52.381	Eptatretus_burgeri
ENSJJAG00000023186	-	99	80.769	ENSEASG00005007307	C1D	82	80.769	Equus_asinus_asinus
ENSJJAG00000023186	-	99	80.769	ENSECAG00000002187	C1D	90	80.769	Equus_caballus
ENSJJAG00000023186	-	93	62.295	ENSELUG00000014823	c1d	81	62.295	Esox_lucius
ENSJJAG00000023186	-	99	81.538	ENSFCAG00000028933	C1D	89	81.538	Felis_catus
ENSJJAG00000023186	-	92	73.554	ENSFALG00000013640	C1D	71	73.554	Ficedula_albicollis
ENSJJAG00000023186	-	99	81.538	ENSFDAG00000010462	-	89	81.538	Fukomys_damarensis
ENSJJAG00000023186	-	99	64.885	ENSFDAG00000014175	-	88	64.885	Fukomys_damarensis
ENSJJAG00000023186	-	92	63.636	ENSFHEG00000010545	c1d	81	63.636	Fundulus_heteroclitus
ENSJJAG00000023186	-	90	62.712	ENSGMOG00000013911	-	90	62.712	Gadus_morhua
ENSJJAG00000023186	-	97	70.312	ENSGALG00000008765	C1D	86	70.312	Gallus_gallus
ENSJJAG00000023186	-	92	62.810	ENSGAFG00000012578	c1d	75	62.810	Gambusia_affinis
ENSJJAG00000023186	-	98	61.240	ENSGACG00000011981	c1d	98	61.240	Gasterosteus_aculeatus
ENSJJAG00000023186	-	99	70.229	ENSGAGG00000013383	C1D	86	70.229	Gopherus_agassizii
ENSJJAG00000023186	-	99	79.231	ENSGGOG00000022296	-	89	79.231	Gorilla_gorilla
ENSJJAG00000023186	-	99	73.846	ENSGGOG00000025808	-	72	73.846	Gorilla_gorilla
ENSJJAG00000023186	-	99	80.769	ENSGGOG00000025982	-	70	80.769	Gorilla_gorilla
ENSJJAG00000023186	-	89	65.812	ENSHBUG00000018531	c1d	72	62.016	Haplochromis_burtoni
ENSJJAG00000023186	-	89	76.923	ENSHGLG00000021219	-	83	76.923	Heterocephalus_glaber_female
ENSJJAG00000023186	-	99	81.538	ENSHGLG00000012332	-	89	81.538	Heterocephalus_glaber_female
ENSJJAG00000023186	-	99	80.000	ENSHGLG00100000221	-	89	80.000	Heterocephalus_glaber_male
ENSJJAG00000023186	-	89	77.778	ENSHGLG00100019951	-	83	77.778	Heterocephalus_glaber_male
ENSJJAG00000023186	-	92	61.983	ENSHCOG00000014568	C1D	80	61.983	Hippocampus_comes
ENSJJAG00000023186	-	92	61.983	ENSHCOG00000014589	c1d	80	61.983	Hippocampus_comes
ENSJJAG00000023186	-	89	58.974	ENSIPUG00000018661	c1d	81	58.974	Ictalurus_punctatus
ENSJJAG00000023186	-	99	80.000	ENSSTOG00000012346	C1D	89	80.000	Ictidomys_tridecemlineatus
ENSJJAG00000023186	-	99	63.846	ENSKMAG00000015077	c1d	82	63.846	Kryptolebias_marmoratus
ENSJJAG00000023186	-	92	62.810	ENSLBEG00000008351	c1d	75	62.810	Labrus_bergylta
ENSJJAG00000023186	-	93	70.492	ENSLACG00000007516	C1D	79	70.492	Latimeria_chalumnae
ENSJJAG00000023186	-	89	68.644	ENSLOCG00000016024	c1d	80	68.644	Lepisosteus_oculatus
ENSJJAG00000023186	-	99	79.231	ENSLAFG00000002083	C1D	89	79.231	Loxodonta_africana
ENSJJAG00000023186	-	99	79.231	ENSMFAG00000028681	-	89	79.231	Macaca_fascicularis
ENSJJAG00000023186	-	99	80.769	ENSMFAG00000034261	C1D	89	80.769	Macaca_fascicularis
ENSJJAG00000023186	-	99	76.154	ENSMFAG00000034034	-	89	76.154	Macaca_fascicularis
ENSJJAG00000023186	-	99	80.769	ENSMMUG00000041557	C1D	91	80.769	Macaca_mulatta
ENSJJAG00000023186	-	99	79.231	ENSMMUG00000017209	-	89	79.231	Macaca_mulatta
ENSJJAG00000023186	-	99	75.385	ENSMMUG00000043184	-	89	75.385	Macaca_mulatta
ENSJJAG00000023186	-	99	80.769	ENSMNEG00000040612	C1D	89	80.769	Macaca_nemestrina
ENSJJAG00000023186	-	99	75.385	ENSMNEG00000020626	-	89	75.385	Macaca_nemestrina
ENSJJAG00000023186	-	99	76.923	ENSMLEG00000028412	-	89	76.923	Mandrillus_leucophaeus
ENSJJAG00000023186	-	99	80.769	ENSMLEG00000027619	C1D	89	80.769	Mandrillus_leucophaeus
ENSJJAG00000023186	-	89	66.667	ENSMAMG00000022156	c1d	75	66.667	Mastacembelus_armatus
ENSJJAG00000023186	-	89	65.812	ENSMZEG00005027343	c1d	83	62.016	Maylandia_zebra
ENSJJAG00000023186	-	97	69.531	ENSMGAG00000004517	C1D	87	69.531	Meleagris_gallopavo
ENSJJAG00000023186	-	99	81.538	ENSMAUG00000008974	C1d	89	81.538	Mesocricetus_auratus
ENSJJAG00000023186	-	99	81.538	ENSMICG00000032141	C1D	89	81.538	Microcebus_murinus
ENSJJAG00000023186	-	99	81.538	ENSMOCG00000010860	C1d	89	81.538	Microtus_ochrogaster
ENSJJAG00000023186	-	98	62.791	ENSMMOG00000007332	c1d	81	62.791	Mola_mola
ENSJJAG00000023186	-	89	74.576	ENSMODG00000003561	C1D	83	74.576	Monodelphis_domestica
ENSJJAG00000023186	-	98	62.791	ENSMALG00000020864	c1d	90	66.667	Monopterus_albus
ENSJJAG00000023186	-	99	80.000	MGP_CAROLIEiJ_G0016110	C1d	99	85.470	Mus_caroli
ENSJJAG00000023186	-	99	80.000	ENSMUSG00000000581	C1d	99	85.470	Mus_musculus
ENSJJAG00000023186	-	99	80.769	MGP_PahariEiJ_G0016781	C1d	99	86.325	Mus_pahari
ENSJJAG00000023186	-	99	80.000	MGP_SPRETEiJ_G0016952	C1d	99	85.470	Mus_spretus
ENSJJAG00000023186	-	99	82.308	ENSMPUG00000006224	C1D	89	82.308	Mustela_putorius_furo
ENSJJAG00000023186	-	99	77.692	ENSMLUG00000029990	-	89	77.692	Myotis_lucifugus
ENSJJAG00000023186	-	99	77.692	ENSMLUG00000024947	-	89	77.692	Myotis_lucifugus
ENSJJAG00000023186	-	99	80.000	ENSMLUG00000010791	-	89	80.000	Myotis_lucifugus
ENSJJAG00000023186	-	100	80.153	ENSNGAG00000011872	-	90	80.153	Nannospalax_galili
ENSJJAG00000023186	-	100	76.336	ENSNGAG00000016675	-	90	76.336	Nannospalax_galili
ENSJJAG00000023186	-	89	75.000	ENSNGAG00000012482	-	89	75.000	Nannospalax_galili
ENSJJAG00000023186	-	89	66.667	ENSNBRG00000010704	c1d	83	62.791	Neolamprologus_brichardi
ENSJJAG00000023186	-	99	80.000	ENSNLEG00000032919	-	70	80.000	Nomascus_leucogenys
ENSJJAG00000023186	-	99	80.000	ENSOPRG00000009586	C1D	89	80.000	Ochotona_princeps
ENSJJAG00000023186	-	89	78.632	ENSODEG00000018525	-	83	78.632	Octodon_degus
ENSJJAG00000023186	-	99	81.538	ENSODEG00000011242	-	89	81.538	Octodon_degus
ENSJJAG00000023186	-	99	80.769	ENSODEG00000018885	-	91	80.769	Octodon_degus
ENSJJAG00000023186	-	89	66.667	ENSONIG00000001233	c1d	83	62.791	Oreochromis_niloticus
ENSJJAG00000023186	-	76	77.778	ENSOANG00000008385	C1D	86	78.000	Ornithorhynchus_anatinus
ENSJJAG00000023186	-	99	78.462	ENSOCUG00000025587	-	89	78.462	Oryctolagus_cuniculus
ENSJJAG00000023186	-	99	78.462	ENSOCUG00000009771	-	89	78.462	Oryctolagus_cuniculus
ENSJJAG00000023186	-	92	65.289	ENSORLG00000021968	c1d	75	65.289	Oryzias_latipes
ENSJJAG00000023186	-	92	65.289	ENSORLG00020000507	c1d	76	65.289	Oryzias_latipes_hni
ENSJJAG00000023186	-	92	65.289	ENSORLG00015004594	c1d	75	65.289	Oryzias_latipes_hsok
ENSJJAG00000023186	-	92	66.116	ENSOMEG00000004672	c1d	75	66.116	Oryzias_melastigma
ENSJJAG00000023186	-	99	80.000	ENSOGAG00000027934	-	89	80.000	Otolemur_garnettii
ENSJJAG00000023186	-	99	80.769	ENSOARG00000019931	C1D	89	80.769	Ovis_aries
ENSJJAG00000023186	-	99	73.846	ENSPPAG00000040091	-	72	73.846	Pan_paniscus
ENSJJAG00000023186	-	99	80.769	ENSPPAG00000037847	-	89	80.769	Pan_paniscus
ENSJJAG00000023186	-	99	80.769	ENSPPRG00000017045	-	89	80.769	Panthera_pardus
ENSJJAG00000023186	-	99	52.308	ENSPPRG00000022830	-	87	52.308	Panthera_pardus
ENSJJAG00000023186	-	99	81.538	ENSPTIG00000009414	C1D	89	81.538	Panthera_tigris_altaica
ENSJJAG00000023186	-	99	80.769	ENSPTRG00000023558	C1D	89	80.769	Pan_troglodytes
ENSJJAG00000023186	-	99	76.923	ENSPANG00000000501	-	89	76.923	Papio_anubis
ENSJJAG00000023186	-	99	80.769	ENSPANG00000002886	C1D	70	80.769	Papio_anubis
ENSJJAG00000023186	-	98	59.231	ENSPKIG00000004877	c1d	85	59.231	Paramormyrops_kingsleyae
ENSJJAG00000023186	-	98	72.656	ENSPSIG00000010015	C1D	83	72.656	Pelodiscus_sinensis
ENSJJAG00000023186	-	99	61.538	ENSPMGG00000009326	c1d	81	62.016	Periophthalmus_magnuspinnatus
ENSJJAG00000023186	-	89	77.119	ENSPCIG00000018629	-	83	77.119	Phascolarctos_cinereus
ENSJJAG00000023186	-	88	72.414	ENSPCIG00000006831	-	81	72.414	Phascolarctos_cinereus
ENSJJAG00000023186	-	98	62.016	ENSPFOG00000003686	c1d	81	62.016	Poecilia_formosa
ENSJJAG00000023186	-	98	62.016	ENSPLAG00000000228	c1d	89	62.016	Poecilia_latipinna
ENSJJAG00000023186	-	98	62.016	ENSPMEG00000023213	c1d	81	62.016	Poecilia_mexicana
ENSJJAG00000023186	-	98	62.791	ENSPREG00000000742	c1d	88	62.791	Poecilia_reticulata
ENSJJAG00000023186	-	99	73.846	ENSPPYG00000002294	-	89	73.846	Pongo_abelii
ENSJJAG00000023186	-	99	80.769	ENSPPYG00000012354	C1D	69	80.769	Pongo_abelii
ENSJJAG00000023186	-	99	67.692	ENSPCAG00000010088	C1D	70	67.692	Procavia_capensis
ENSJJAG00000023186	-	99	81.538	ENSPCOG00000016112	C1D	89	81.538	Propithecus_coquereli
ENSJJAG00000023186	-	99	80.769	ENSPVAG00000012692	C1D	70	80.769	Pteropus_vampyrus
ENSJJAG00000023186	-	89	65.812	ENSPNYG00000008789	c1d	83	62.016	Pundamilia_nyererei
ENSJJAG00000023186	-	89	66.667	ENSPNAG00000004219	c1d	80	66.667	Pygocentrus_nattereri
ENSJJAG00000023186	-	99	80.000	ENSRNOG00000005982	C1d	89	80.000	Rattus_norvegicus
ENSJJAG00000023186	-	99	76.154	ENSRBIG00000026211	-	89	76.154	Rhinopithecus_bieti
ENSJJAG00000023186	-	99	76.923	ENSRROG00000005944	-	89	76.923	Rhinopithecus_roxellana
ENSJJAG00000023186	-	99	80.769	ENSRROG00000029013	C1D	89	80.769	Rhinopithecus_roxellana
ENSJJAG00000023186	-	99	80.769	ENSSBOG00000025275	C1D	89	80.769	Saimiri_boliviensis_boliviensis
ENSJJAG00000023186	-	89	77.119	ENSSHAG00000008352	C1D	57	77.119	Sarcophilus_harrisii
ENSJJAG00000023186	-	89	68.644	ENSSFOG00015010861	c1d	84	68.644	Scleropages_formosus
ENSJJAG00000023186	-	98	58.140	ENSSMAG00000019230	c1d	81	58.140	Scophthalmus_maximus
ENSJJAG00000023186	-	98	63.566	ENSSDUG00000020213	c1d	81	63.566	Seriola_dumerili
ENSJJAG00000023186	-	98	63.566	ENSSLDG00000017371	c1d	81	63.566	Seriola_lalandi_dorsalis
ENSJJAG00000023186	-	99	69.466	ENSSPUG00000006525	C1D	87	69.466	Sphenodon_punctatus
ENSJJAG00000023186	-	89	68.376	ENSSPAG00000008574	c1d	75	68.376	Stegastes_partitus
ENSJJAG00000023186	-	87	72.807	ENSSSCG00000035701	-	95	72.807	Sus_scrofa
ENSJJAG00000023186	-	99	82.308	ENSSSCG00000039331	-	89	82.308	Sus_scrofa
ENSJJAG00000023186	-	92	71.901	ENSTGUG00000002367	C1D	81	71.901	Taeniopygia_guttata
ENSJJAG00000023186	-	94	60.976	ENSTRUG00000012245	c1d	72	60.976	Takifugu_rubripes
ENSJJAG00000023186	-	98	60.465	ENSTNIG00000009827	c1d	84	60.465	Tetraodon_nigroviridis
ENSJJAG00000023186	-	99	80.769	ENSTBEG00000009797	C1D	89	80.769	Tupaia_belangeri
ENSJJAG00000023186	-	99	80.769	ENSTTRG00000013982	C1D	72	80.769	Tursiops_truncatus
ENSJJAG00000023186	-	99	68.939	ENSUAMG00000025246	C1D	89	68.939	Ursus_americanus
ENSJJAG00000023186	-	99	81.538	ENSUMAG00000021118	-	89	81.538	Ursus_maritimus
ENSJJAG00000023186	-	77	70.192	ENSUMAG00000006451	-	91	68.421	Ursus_maritimus
ENSJJAG00000023186	-	99	79.231	ENSVPAG00000012080	C1D	71	79.231	Vicugna_pacos
ENSJJAG00000023186	-	99	80.000	ENSVVUG00000027629	C1D	79	80.000	Vulpes_vulpes
ENSJJAG00000023186	-	98	67.692	ENSXETG00000025934	c1d	87	67.692	Xenopus_tropicalis
ENSJJAG00000023186	-	98	61.240	ENSXCOG00000013813	c1d	81	61.240	Xiphophorus_couchianus
ENSJJAG00000023186	-	98	61.240	ENSXMAG00000022273	c1d	81	61.240	Xiphophorus_maculatus