EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSJJAG00000023415 (Gene tree)
Gene ID
101600538
Gene Symbol
Cpsf3
Alias
73 kDa
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Jaculus_jaculus
Status
putative
Strand
Plus strand
Length
32014 bases
Position
chrJH725470.1:1159558-1191571
Accession
101600538
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSJJAP00000023737CPSF73-100_CPF11718.83.3e-5311
ENSJJAP00000023737Beta-CaspPF10996.85e-3311
ENSJJAP00000023737Lactamase_BPF00753.279.6e-1911
ENSJJAP00000023737RMMBLPF07521.121.4e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSJJAT00000030315-2170XM_004660063ENSJJAP00000023737684 (aa)XP_004660120UPI0003333984
Gene Model
Click here to download ENSJJAG00000023415's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000023415's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSJJAG00000023415Cpsf36537.445ENSJJAG00000008717Ints117337.946
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSJJAG00000023415Cpsf310097.807ENSG00000119203CPSF3100100.000Homo_sapiens
ENSJJAG00000023415Cpsf37396.393ENSAPOG00000012241CPSF39096.378Acanthochromis_polyacanthus
ENSJJAG00000023415Cpsf39984.751ENSAPOG00000022087cpsf39984.751Acanthochromis_polyacanthus
ENSJJAG00000023415Cpsf310097.953ENSAMEG00000008493CPSF310097.953Ailuropoda_melanoleuca
ENSJJAG00000023415Cpsf39285.873ENSACIG00000023663CPSF39985.873Amphilophus_citrinellus
ENSJJAG00000023415Cpsf39281.905ENSACIG00000009846cpsf39981.905Amphilophus_citrinellus
ENSJJAG00000023415Cpsf39984.751ENSAOCG00000022056cpsf39490.662Amphiprion_ocellaris
ENSJJAG00000023415Cpsf39987.647ENSAOCG00000010077CPSF39887.647Amphiprion_ocellaris
ENSJJAG00000023415Cpsf39987.647ENSAPEG00000021167CPSF39887.647Amphiprion_percula
ENSJJAG00000023415Cpsf39984.897ENSAPEG00000019526cpsf39886.154Amphiprion_percula
ENSJJAG00000023415Cpsf39982.647ENSATEG00000014525CPSF39882.647Anabas_testudineus
ENSJJAG00000023415Cpsf39985.147ENSATEG00000003959cpsf39885.147Anabas_testudineus
ENSJJAG00000023415Cpsf39894.345ENSAPLG00000006941CPSF39894.345Anas_platyrhynchos
ENSJJAG00000023415Cpsf39391.654ENSACAG00000001759CPSF39991.654Anolis_carolinensis
ENSJJAG00000023415Cpsf310091.082ENSANAG00000031254CPSF310091.082Aotus_nancymaae
ENSJJAG00000023415Cpsf39885.157ENSACLG00000014484cpsf39985.157Astatotilapia_calliptera
ENSJJAG00000023415Cpsf39285.714ENSACLG00000018846CPSF39985.714Astatotilapia_calliptera
ENSJJAG00000023415Cpsf39987.353ENSAMXG00000004786cpsf39887.353Astyanax_mexicanus
ENSJJAG00000023415Cpsf310097.953ENSBTAG00000019735CPSF310097.953Bos_taurus
ENSJJAG00000023415Cpsf39258.760WBGene00013460cpsf-39158.760Caenorhabditis_elegans
ENSJJAG00000023415Cpsf310097.515ENSCJAG00000006276CPSF310097.515Callithrix_jacchus
ENSJJAG00000023415Cpsf310097.953ENSCAFG00000003375CPSF39597.953Canis_familiaris
ENSJJAG00000023415Cpsf39098.708ENSCAFG00020026799CPSF310098.708Canis_lupus_dingo
ENSJJAG00000023415Cpsf310097.953ENSCHIG00000013973CPSF310097.953Capra_hircus
ENSJJAG00000023415Cpsf310097.661ENSTSYG00000002967CPSF310097.661Carlito_syrichta
ENSJJAG00000023415Cpsf39896.552ENSCAPG00000013851CPSF310096.552Cavia_aperea
ENSJJAG00000023415Cpsf310096.491ENSCPOG00000011299CPSF310096.491Cavia_porcellus
ENSJJAG00000023415Cpsf310097.515ENSCCAG00000036730CPSF310097.515Cebus_capucinus
ENSJJAG00000023415Cpsf310095.036ENSCATG00000014770CPSF39998.967Cercocebus_atys
ENSJJAG00000023415Cpsf310096.199ENSCLAG00000002727CPSF310096.199Chinchilla_lanigera
ENSJJAG00000023415Cpsf310090.205ENSCSAG00000007125CPSF310090.205Chlorocebus_sabaeus
ENSJJAG00000023415Cpsf386100.000ENSCHOG00000000180CPSF38570.702Choloepus_hoffmanni
ENSJJAG00000023415Cpsf39994.721ENSCPBG00000014074CPSF39994.721Chrysemys_picta_bellii
ENSJJAG00000023415Cpsf39967.591ENSCING00000007214-9867.591Ciona_intestinalis
ENSJJAG00000023415Cpsf310084.942ENSCANG00000034435CPSF310084.942Colobus_angolensis_palliatus
ENSJJAG00000023415Cpsf310098.246ENSCGRG00001013134Cpsf310098.246Cricetulus_griseus_chok1gshd
ENSJJAG00000023415Cpsf310098.246ENSCGRG00000018319Cpsf310098.246Cricetulus_griseus_crigri
ENSJJAG00000023415Cpsf39986.490ENSCSEG00000002021CPSF39986.244Cynoglossus_semilaevis
ENSJJAG00000023415Cpsf39987.647ENSCVAG00000015067CPSF39887.647Cyprinodon_variegatus
ENSJJAG00000023415Cpsf39988.529ENSDARG00000027649cpsf39888.529Danio_rerio
ENSJJAG00000023415Cpsf310096.496ENSDNOG00000008940CPSF39596.496Dasypus_novemcinctus
ENSJJAG00000023415Cpsf39597.849ENSDORG00000014263Cpsf310097.849Dipodomys_ordii
ENSJJAG00000023415Cpsf39966.814FBgn0261065Cpsf739866.814Drosophila_melanogaster
ENSJJAG00000023415Cpsf39584.639ENSETEG00000003893CPSF310084.639Echinops_telfairi
ENSJJAG00000023415Cpsf39978.223ENSEBUG00000009018cpsf39878.223Eptatretus_burgeri
ENSJJAG00000023415Cpsf310097.953ENSEASG00005003970CPSF310097.953Equus_asinus_asinus
ENSJJAG00000023415Cpsf310097.953ENSECAG00000019911CPSF310097.953Equus_caballus
ENSJJAG00000023415Cpsf310082.310ENSEEUG00000015422CPSF310082.310Erinaceus_europaeus
ENSJJAG00000023415Cpsf39987.059ENSELUG00000013775cpsf39887.059Esox_lucius
ENSJJAG00000023415Cpsf310097.953ENSFCAG00000007852CPSF310097.991Felis_catus
ENSJJAG00000023415Cpsf39594.590ENSFALG00000006572CPSF310094.590Ficedula_albicollis
ENSJJAG00000023415Cpsf39996.041ENSFDAG00000006317CPSF39996.041Fukomys_damarensis
ENSJJAG00000023415Cpsf35968.215ENSFHEG00000012186CPSF39968.215Fundulus_heteroclitus
ENSJJAG00000023415Cpsf39984.548ENSFHEG00000014774cpsf39984.548Fundulus_heteroclitus
ENSJJAG00000023415Cpsf39985.924ENSGMOG00000003157cpsf39985.924Gadus_morhua
ENSJJAG00000023415Cpsf39993.997ENSGALG00000016424CPSF39993.997Gallus_gallus
ENSJJAG00000023415Cpsf39281.587ENSGAFG00000019449cpsf39981.587Gambusia_affinis
ENSJJAG00000023415Cpsf39987.629ENSGAFG00000008016CPSF39887.629Gambusia_affinis
ENSJJAG00000023415Cpsf36892.291ENSGAGG00000025583CPSF39392.291Gopherus_agassizii
ENSJJAG00000023415Cpsf310095.422ENSGGOG00000001757CPSF310097.795Gorilla_gorilla
ENSJJAG00000023415Cpsf39985.212ENSHBUG00000001188cpsf39985.212Haplochromis_burtoni
ENSJJAG00000023415Cpsf35980.000ENSHBUG00000014332CPSF39980.000Haplochromis_burtoni
ENSJJAG00000023415Cpsf310095.614ENSHGLG00000000666CPSF39995.614Heterocephalus_glaber_female
ENSJJAG00000023415Cpsf310095.614ENSHGLG00100007765CPSF39995.614Heterocephalus_glaber_male
ENSJJAG00000023415Cpsf39985.588ENSHCOG00000015957CPSF39785.588Hippocampus_comes
ENSJJAG00000023415Cpsf39984.018ENSHCOG00000007251cpsf39984.018Hippocampus_comes
ENSJJAG00000023415Cpsf39986.324ENSIPUG00000023488cpsf39886.324Ictalurus_punctatus
ENSJJAG00000023415Cpsf310097.515ENSSTOG00000004476CPSF310097.515Ictidomys_tridecemlineatus
ENSJJAG00000023415Cpsf39984.164ENSKMAG00000002806cpsf39984.164Kryptolebias_marmoratus
ENSJJAG00000023415Cpsf39987.059ENSKMAG00000007317CPSF39887.059Kryptolebias_marmoratus
ENSJJAG00000023415Cpsf35578.877ENSLBEG00000015018-9978.877Labrus_bergylta
ENSJJAG00000023415Cpsf39979.295ENSLBEG00000020569cpsf39479.295Labrus_bergylta
ENSJJAG00000023415Cpsf39588.598ENSLBEG00000013492CPSF39888.598Labrus_bergylta
ENSJJAG00000023415Cpsf39983.211ENSLACG00000008308CPSF39883.211Latimeria_chalumnae
ENSJJAG00000023415Cpsf39988.693ENSLOCG00000016823cpsf39888.693Lepisosteus_oculatus
ENSJJAG00000023415Cpsf39996.324ENSLAFG00000009467CPSF310096.324Loxodonta_africana
ENSJJAG00000023415Cpsf310097.661ENSMFAG00000001339CPSF310097.661Macaca_fascicularis
ENSJJAG00000023415Cpsf39597.682ENSMMUG00000018038CPSF310097.682Macaca_mulatta
ENSJJAG00000023415Cpsf310085.088ENSMNEG00000039447CPSF310085.088Macaca_nemestrina
ENSJJAG00000023415Cpsf310097.807ENSMLEG00000026825CPSF310097.807Mandrillus_leucophaeus
ENSJJAG00000023415Cpsf39985.169ENSMAMG00000003076cpsf39985.169Mastacembelus_armatus
ENSJJAG00000023415Cpsf39284.810ENSMAMG00000008835CPSF39984.810Mastacembelus_armatus
ENSJJAG00000023415Cpsf39987.941ENSMZEG00005006258CPSF39887.941Maylandia_zebra
ENSJJAG00000023415Cpsf39985.212ENSMZEG00005014358cpsf39985.212Maylandia_zebra
ENSJJAG00000023415Cpsf39894.303ENSMGAG00000013995CPSF310094.303Meleagris_gallopavo
ENSJJAG00000023415Cpsf35596.543ENSMAUG00000000166Cpsf310096.543Mesocricetus_auratus
ENSJJAG00000023415Cpsf310092.398ENSMICG00000002363CPSF310092.398Microcebus_murinus
ENSJJAG00000023415Cpsf310093.567ENSMOCG00000020067Cpsf310093.567Microtus_ochrogaster
ENSJJAG00000023415Cpsf38071.472ENSMMOG00000011923CPSF38477.500Mola_mola
ENSJJAG00000023415Cpsf39482.171ENSMMOG00000018212CPSF39882.171Mola_mola
ENSJJAG00000023415Cpsf310095.080ENSMODG00000014703CPSF310095.080Monodelphis_domestica
ENSJJAG00000023415Cpsf39985.505ENSMALG00000016416cpsf39985.505Monopterus_albus
ENSJJAG00000023415Cpsf39382.656ENSMALG00000011474CPSF39982.656Monopterus_albus
ENSJJAG00000023415Cpsf310097.953MGP_CAROLIEiJ_G0017640Cpsf310097.953Mus_caroli
ENSJJAG00000023415Cpsf310097.953ENSMUSG00000054309Cpsf310097.953Mus_musculus
ENSJJAG00000023415Cpsf310097.807MGP_PahariEiJ_G0029397Cpsf310097.807Mus_pahari
ENSJJAG00000023415Cpsf310097.953MGP_SPRETEiJ_G0018481Cpsf310097.953Mus_spretus
ENSJJAG00000023415Cpsf310097.368ENSMPUG00000013213CPSF310097.368Mustela_putorius_furo
ENSJJAG00000023415Cpsf310097.226ENSMLUG00000010636CPSF310097.226Myotis_lucifugus
ENSJJAG00000023415Cpsf310098.099ENSNGAG00000019836Cpsf310098.099Nannospalax_galili
ENSJJAG00000023415Cpsf39984.773ENSNBRG00000004770cpsf39984.773Neolamprologus_brichardi
ENSJJAG00000023415Cpsf39285.714ENSNBRG00000010525CPSF39985.714Neolamprologus_brichardi
ENSJJAG00000023415Cpsf310097.661ENSNLEG00000013359CPSF310097.682Nomascus_leucogenys
ENSJJAG00000023415Cpsf310064.474ENSMEUG00000013117-10064.474Notamacropus_eugenii
ENSJJAG00000023415Cpsf310088.743ENSOPRG00000008902CPSF310088.743Ochotona_princeps
ENSJJAG00000023415Cpsf310095.760ENSODEG00000003129CPSF310095.760Octodon_degus
ENSJJAG00000023415Cpsf39985.212ENSONIG00000018812cpsf39985.212Oreochromis_niloticus
ENSJJAG00000023415Cpsf38294.858ENSOANG00000008577CPSF310094.858Ornithorhynchus_anatinus
ENSJJAG00000023415Cpsf310097.807ENSOCUG00000003728CPSF310097.807Oryctolagus_cuniculus
ENSJJAG00000023415Cpsf39982.945ENSORLG00000018854cpsf39982.945Oryzias_latipes
ENSJJAG00000023415Cpsf39982.799ENSORLG00020013331cpsf39982.799Oryzias_latipes_hni
ENSJJAG00000023415Cpsf39982.945ENSORLG00015011017cpsf39982.945Oryzias_latipes_hsok
ENSJJAG00000023415Cpsf39983.309ENSOMEG00000010647cpsf39583.309Oryzias_melastigma
ENSJJAG00000023415Cpsf310087.719ENSOGAG00000001680CPSF310087.719Otolemur_garnettii
ENSJJAG00000023415Cpsf310097.953ENSOARG00000015073CPSF310097.953Ovis_aries
ENSJJAG00000023415Cpsf310097.807ENSPPAG00000042457CPSF310097.807Pan_paniscus
ENSJJAG00000023415Cpsf310097.661ENSPPRG00000016790CPSF310097.682Panthera_pardus
ENSJJAG00000023415Cpsf39997.794ENSPTIG00000003920CPSF310097.638Panthera_tigris_altaica
ENSJJAG00000023415Cpsf310097.807ENSPTRG00000011638CPSF310097.807Pan_troglodytes
ENSJJAG00000023415Cpsf310097.515ENSPANG00000016798CPSF310097.515Papio_anubis
ENSJJAG00000023415Cpsf39988.824ENSPKIG00000023646cpsf39988.527Paramormyrops_kingsleyae
ENSJJAG00000023415Cpsf39992.972ENSPSIG00000016144CPSF310092.972Pelodiscus_sinensis
ENSJJAG00000023415Cpsf38384.817ENSPMGG00000006141-9984.817Periophthalmus_magnuspinnatus
ENSJJAG00000023415Cpsf35978.025ENSPMGG00000015311CPSF39978.025Periophthalmus_magnuspinnatus
ENSJJAG00000023415Cpsf310097.661ENSPEMG00000017668Cpsf310097.661Peromyscus_maniculatus_bairdii
ENSJJAG00000023415Cpsf37890.317ENSPMAG00000004841cpsf39990.317Petromyzon_marinus
ENSJJAG00000023415Cpsf39896.552ENSPCIG00000009823CPSF39896.779Phascolarctos_cinereus
ENSJJAG00000023415Cpsf39984.187ENSPFOG00000015922cpsf39984.187Poecilia_formosa
ENSJJAG00000023415Cpsf39987.334ENSPFOG00000010418-9887.334Poecilia_formosa
ENSJJAG00000023415Cpsf35979.950ENSPLAG00000021300-9979.950Poecilia_latipinna
ENSJJAG00000023415Cpsf39984.187ENSPLAG00000000882cpsf39984.187Poecilia_latipinna
ENSJJAG00000023415Cpsf39984.334ENSPMEG00000018309cpsf39984.334Poecilia_mexicana
ENSJJAG00000023415Cpsf39281.905ENSPREG00000014875cpsf39981.905Poecilia_reticulata
ENSJJAG00000023415Cpsf39982.032ENSPREG00000004482CPSF39882.032Poecilia_reticulata
ENSJJAG00000023415Cpsf310093.275ENSPPYG00000012666CPSF310093.275Pongo_abelii
ENSJJAG00000023415Cpsf39563.134ENSPCAG00000015042CPSF310063.134Procavia_capensis
ENSJJAG00000023415Cpsf38891.844ENSPCOG00000023016CPSF39891.844Propithecus_coquereli
ENSJJAG00000023415Cpsf39998.094ENSPVAG00000005324CPSF39998.094Pteropus_vampyrus
ENSJJAG00000023415Cpsf37990.792ENSPNYG00000021047CPSF39190.792Pundamilia_nyererei
ENSJJAG00000023415Cpsf39985.212ENSPNYG00000004405cpsf39985.212Pundamilia_nyererei
ENSJJAG00000023415Cpsf39986.765ENSPNAG00000023060cpsf39886.765Pygocentrus_nattereri
ENSJJAG00000023415Cpsf39998.094ENSRNOG00000052418Cpsf39998.094Rattus_norvegicus
ENSJJAG00000023415Cpsf310091.813ENSRBIG00000041615CPSF39993.199Rhinopithecus_bieti
ENSJJAG00000023415Cpsf310097.807ENSRROG00000033792CPSF310097.807Rhinopithecus_roxellana
ENSJJAG00000023415Cpsf39340.805YLR277CYSH19540.805Saccharomyces_cerevisiae
ENSJJAG00000023415Cpsf310091.594ENSSBOG00000027263CPSF310091.594Saimiri_boliviensis_boliviensis
ENSJJAG00000023415Cpsf310096.637ENSSHAG00000007024CPSF310096.637Sarcophilus_harrisii
ENSJJAG00000023415Cpsf39988.546ENSSFOG00015002108cpsf39988.546Scleropages_formosus
ENSJJAG00000023415Cpsf39587.057ENSSMAG00000020534CPSF39587.057Scophthalmus_maximus
ENSJJAG00000023415Cpsf39985.066ENSSDUG00000002828cpsf39685.066Seriola_dumerili
ENSJJAG00000023415Cpsf39987.647ENSSDUG00000018498CPSF39887.647Seriola_dumerili
ENSJJAG00000023415Cpsf39987.647ENSSLDG00000005234CPSF39887.647Seriola_lalandi_dorsalis
ENSJJAG00000023415Cpsf39985.066ENSSLDG00000008469cpsf39190.339Seriola_lalandi_dorsalis
ENSJJAG00000023415Cpsf310080.117ENSSARG00000005186CPSF310080.117Sorex_araneus
ENSJJAG00000023415Cpsf39891.654ENSSPUG00000015525CPSF39791.654Sphenodon_punctatus
ENSJJAG00000023415Cpsf39984.751ENSSPAG00000018579cpsf39984.751Stegastes_partitus
ENSJJAG00000023415Cpsf39987.353ENSSPAG00000002906CPSF39887.353Stegastes_partitus
ENSJJAG00000023415Cpsf39998.097ENSSSCG00000020799CPSF39998.097Sus_scrofa
ENSJJAG00000023415Cpsf39994.436ENSTGUG00000013016CPSF39994.436Taeniopygia_guttata
ENSJJAG00000023415Cpsf39985.000ENSTRUG00000007030cpsf39785.000Takifugu_rubripes
ENSJJAG00000023415Cpsf35972.482ENSTRUG00000013905CPSF39972.482Takifugu_rubripes
ENSJJAG00000023415Cpsf38592.603ENSTBEG00000002707CPSF38592.603Tupaia_belangeri
ENSJJAG00000023415Cpsf38894.624ENSTTRG00000000861CPSF38894.624Tursiops_truncatus
ENSJJAG00000023415Cpsf39995.308ENSUAMG00000007535CPSF39895.308Ursus_americanus
ENSJJAG00000023415Cpsf39597.991ENSUMAG00000003676CPSF310097.991Ursus_maritimus
ENSJJAG00000023415Cpsf39395.110ENSVPAG00000008041CPSF310095.110Vicugna_pacos
ENSJJAG00000023415Cpsf310097.953ENSVVUG00000002194CPSF310097.953Vulpes_vulpes
ENSJJAG00000023415Cpsf39989.134ENSXETG00000008263cpsf39889.134Xenopus_tropicalis
ENSJJAG00000023415Cpsf35478.706ENSXCOG00000000957-8778.706Xiphophorus_couchianus
ENSJJAG00000023415Cpsf39984.187ENSXCOG00000019695cpsf39984.187Xiphophorus_couchianus
ENSJJAG00000023415Cpsf39987.482ENSXMAG00000027291CPSF39887.482Xiphophorus_maculatus
ENSJJAG00000023415Cpsf39984.187ENSXMAG00000009784cpsf310083.617Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us