EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000023559 (Gene tree)
Gene ID: 101614117
Gene Symbol: Pnkd
Alias: 2210013N15Rik|2810403H05Rik|Brp17
Full Name: PNKD%2C MBL domain containing
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 88432 bases
Position: chrJH725491.1:11964330-12052761
Accession: 101614117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000023941	Lactamase_B	PF00753.27	1.8e-10	1	1
ENSJJAP00000023943	Lactamase_B	PF00753.27	2.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000030521	-	1414	XM_012949753	ENSJJAP00000023943	423 (aa)	XP_012805207	UPI00064CDFC9
ENSJJAT00000030519	-	1474	XM_004662936	ENSJJAP00000023941	384 (aa)	XP_004662993	UPI00033325DF

Gene Model

Click here to download ENSJJAG00000023559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000023559's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000023559	Pnkd	62	43.277	ENSJJAG00000018924	-	90	43.404

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000023559	Pnkd	100	95.584	ENSG00000127838	PNKD	100	94.545	Homo_sapiens
ENSJJAG00000023559	Pnkd	83	60.815	ENSAPOG00000019072	pnkd	99	56.583	Acanthochromis_polyacanthus
ENSJJAG00000023559	Pnkd	100	94.805	ENSAMEG00000003089	PNKD	100	93.766	Ailuropoda_melanoleuca
ENSJJAG00000023559	Pnkd	79	62.092	ENSACIG00000015359	pnkd	84	62.092	Amphilophus_citrinellus
ENSJJAG00000023559	Pnkd	76	57.860	ENSAOCG00000024159	pnkd	95	54.908	Amphiprion_ocellaris
ENSJJAG00000023559	Pnkd	83	60.502	ENSAOCG00000011458	-	99	56.303	Amphiprion_ocellaris
ENSJJAG00000023559	Pnkd	83	60.502	ENSAPEG00000011710	pnkd	99	56.303	Amphiprion_percula
ENSJJAG00000023559	Pnkd	83	60.188	ENSATEG00000002727	pnkd	90	60.188	Anabas_testudineus
ENSJJAG00000023559	Pnkd	85	60.366	ENSACAG00000001617	PNKD	99	56.250	Anolis_carolinensis
ENSJJAG00000023559	Pnkd	100	95.844	ENSANAG00000019661	PNKD	100	94.805	Aotus_nancymaae
ENSJJAG00000023559	Pnkd	83	61.129	ENSACLG00000021665	pnkd	88	61.129	Astatotilapia_calliptera
ENSJJAG00000023559	Pnkd	80	63.141	ENSAMXG00000043305	pnkd	86	63.141	Astyanax_mexicanus
ENSJJAG00000023559	Pnkd	83	92.163	ENSBTAG00000003936	PNKD	98	84.659	Bos_taurus
ENSJJAG00000023559	Pnkd	100	95.844	ENSCJAG00000010820	PNKD	100	94.805	Callithrix_jacchus
ENSJJAG00000023559	Pnkd	100	92.727	ENSCAFG00000014632	PNKD	100	91.688	Canis_familiaris
ENSJJAG00000023559	Pnkd	83	92.476	ENSCAFG00020027093	PNKD	97	84.615	Canis_lupus_dingo
ENSJJAG00000023559	Pnkd	100	94.805	ENSCHIG00000002862	PNKD	100	94.026	Capra_hircus
ENSJJAG00000023559	Pnkd	100	96.623	ENSTSYG00000034863	PNKD	100	96.623	Carlito_syrichta
ENSJJAG00000023559	Pnkd	100	95.325	ENSCPOG00000020589	PNKD	100	94.340	Cavia_porcellus
ENSJJAG00000023559	Pnkd	100	95.584	ENSCCAG00000036713	PNKD	100	94.545	Cebus_capucinus
ENSJJAG00000023559	Pnkd	100	95.844	ENSCATG00000041188	PNKD	100	94.805	Cercocebus_atys
ENSJJAG00000023559	Pnkd	100	95.844	ENSCLAG00000012048	PNKD	100	94.805	Chinchilla_lanigera
ENSJJAG00000023559	Pnkd	100	95.844	ENSCSAG00000008892	PNKD	100	94.805	Chlorocebus_sabaeus
ENSJJAG00000023559	Pnkd	100	95.325	ENSCANG00000032283	PNKD	100	94.286	Colobus_angolensis_palliatus
ENSJJAG00000023559	Pnkd	100	95.584	ENSCGRG00001024071	Pnkd	100	94.545	Cricetulus_griseus_chok1gshd
ENSJJAG00000023559	Pnkd	99	93.587	ENSCGRG00000005443	Pnkd	100	92.637	Cricetulus_griseus_crigri
ENSJJAG00000023559	Pnkd	83	58.307	ENSCSEG00000013958	pnkd	99	54.062	Cynoglossus_semilaevis
ENSJJAG00000023559	Pnkd	82	61.465	ENSCVAG00000005723	pnkd	98	56.620	Cyprinodon_variegatus
ENSJJAG00000023559	Pnkd	83	60.312	ENSDARG00000071032	pnkd	88	60.312	Danio_rerio
ENSJJAG00000023559	Pnkd	79	96.721	ENSDNOG00000046154	PNKD	86	86.932	Dasypus_novemcinctus
ENSJJAG00000023559	Pnkd	100	97.158	ENSDORG00000016109	Pnkd	100	97.158	Dipodomys_ordii
ENSJJAG00000023559	Pnkd	100	65.039	ENSETEG00000014587	PNKD	100	63.753	Echinops_telfairi
ENSJJAG00000023559	Pnkd	78	54.153	ENSEBUG00000013857	pnkd	97	53.937	Eptatretus_burgeri
ENSJJAG00000023559	Pnkd	79	95.425	ENSEASG00005012391	PNKD	97	85.185	Equus_asinus_asinus
ENSJJAG00000023559	Pnkd	100	94.805	ENSECAG00000013322	PNKD	100	94.026	Equus_caballus
ENSJJAG00000023559	Pnkd	83	58.934	ENSELUG00000015007	pnkd	91	56.571	Esox_lucius
ENSJJAG00000023559	Pnkd	83	92.476	ENSFCAG00000002373	PNKD	97	86.040	Felis_catus
ENSJJAG00000023559	Pnkd	79	62.951	ENSFALG00000004028	PNKD	91	62.623	Ficedula_albicollis
ENSJJAG00000023559	Pnkd	100	96.104	ENSFDAG00000012326	PNKD	100	96.104	Fukomys_damarensis
ENSJJAG00000023559	Pnkd	83	60.815	ENSFHEG00000010999	pnkd	85	60.815	Fundulus_heteroclitus
ENSJJAG00000023559	Pnkd	83	58.934	ENSGMOG00000009565	pnkd	96	56.686	Gadus_morhua
ENSJJAG00000023559	Pnkd	79	62.623	ENSGALG00000022166	PNKD	99	60.772	Gallus_gallus
ENSJJAG00000023559	Pnkd	83	61.442	ENSGAFG00000013942	pnkd	79	61.129	Gambusia_affinis
ENSJJAG00000023559	Pnkd	82	60.828	ENSGACG00000007119	pnkd	98	56.818	Gasterosteus_aculeatus
ENSJJAG00000023559	Pnkd	79	62.418	ENSGAGG00000017234	PNKD	96	62.418	Gopherus_agassizii
ENSJJAG00000023559	Pnkd	100	95.584	ENSGGOG00000006892	PNKD	100	94.545	Gorilla_gorilla
ENSJJAG00000023559	Pnkd	83	61.129	ENSHBUG00000001234	pnkd	88	61.129	Haplochromis_burtoni
ENSJJAG00000023559	Pnkd	100	95.325	ENSHGLG00000013971	PNKD	100	94.286	Heterocephalus_glaber_female
ENSJJAG00000023559	Pnkd	100	95.325	ENSHGLG00100005225	PNKD	100	94.286	Heterocephalus_glaber_male
ENSJJAG00000023559	Pnkd	82	61.465	ENSHCOG00000018894	pnkd	87	61.465	Hippocampus_comes
ENSJJAG00000023559	Pnkd	80	64.103	ENSIPUG00000013907	pnkd	99	64.495	Ictalurus_punctatus
ENSJJAG00000023559	Pnkd	100	96.364	ENSSTOG00000024593	PNKD	100	96.364	Ictidomys_tridecemlineatus
ENSJJAG00000023559	Pnkd	83	60.188	ENSKMAG00000014879	pnkd	88	60.188	Kryptolebias_marmoratus
ENSJJAG00000023559	Pnkd	83	60.188	ENSLBEG00000000985	pnkd	88	60.188	Labrus_bergylta
ENSJJAG00000023559	Pnkd	83	60.502	ENSLOCG00000000821	pnkd	88	60.502	Lepisosteus_oculatus
ENSJJAG00000023559	Pnkd	100	92.925	ENSLAFG00000007427	PNKD	100	92.925	Loxodonta_africana
ENSJJAG00000023559	Pnkd	100	95.844	ENSMFAG00000038281	PNKD	100	94.805	Macaca_fascicularis
ENSJJAG00000023559	Pnkd	85	96.341	ENSMNEG00000041541	PNKD	100	97.452	Macaca_nemestrina
ENSJJAG00000023559	Pnkd	100	95.844	ENSMLEG00000042812	PNKD	100	94.805	Mandrillus_leucophaeus
ENSJJAG00000023559	Pnkd	83	60.502	ENSMAMG00000017212	pnkd	99	56.583	Mastacembelus_armatus
ENSJJAG00000023559	Pnkd	77	62.712	ENSMZEG00005012514	pnkd	100	62.712	Maylandia_zebra
ENSJJAG00000023559	Pnkd	50	50.909	ENSMGAG00000011524	PNKD	100	55.804	Meleagris_gallopavo
ENSJJAG00000023559	Pnkd	79	96.405	ENSMAUG00000013099	Pnkd	97	86.895	Mesocricetus_auratus
ENSJJAG00000023559	Pnkd	100	95.844	ENSMICG00000042547	PNKD	100	95.065	Microcebus_murinus
ENSJJAG00000023559	Pnkd	100	94.041	ENSMOCG00000007956	Pnkd	100	94.560	Microtus_ochrogaster
ENSJJAG00000023559	Pnkd	88	57.925	ENSMMOG00000005679	pnkd	99	57.681	Mola_mola
ENSJJAG00000023559	Pnkd	88	72.832	ENSMODG00000015497	PNKD	87	79.355	Monodelphis_domestica
ENSJJAG00000023559	Pnkd	83	61.755	ENSMALG00000005967	pnkd	89	57.143	Monopterus_albus
ENSJJAG00000023559	Pnkd	100	95.584	MGP_CAROLIEiJ_G0014258	Pnkd	100	94.545	Mus_caroli
ENSJJAG00000023559	Pnkd	100	95.844	ENSMUSG00000026179	Pnkd	100	94.805	Mus_musculus
ENSJJAG00000023559	Pnkd	100	95.844	MGP_PahariEiJ_G0027496	Pnkd	100	94.805	Mus_pahari
ENSJJAG00000023559	Pnkd	100	95.584	MGP_SPRETEiJ_G0015064	Pnkd	100	94.545	Mus_spretus
ENSJJAG00000023559	Pnkd	83	92.790	ENSMPUG00000016531	PNKD	97	85.470	Mustela_putorius_furo
ENSJJAG00000023559	Pnkd	79	95.425	ENSMLUG00000004125	PNKD	100	94.118	Myotis_lucifugus
ENSJJAG00000023559	Pnkd	100	95.584	ENSNGAG00000014980	Pnkd	100	94.545	Nannospalax_galili
ENSJJAG00000023559	Pnkd	80	62.460	ENSNBRG00000020031	pnkd	96	62.460	Neolamprologus_brichardi
ENSJJAG00000023559	Pnkd	100	73.506	ENSMEUG00000011266	PNKD	100	73.247	Notamacropus_eugenii
ENSJJAG00000023559	Pnkd	89	90.379	ENSODEG00000009734	PNKD	97	88.604	Octodon_degus
ENSJJAG00000023559	Pnkd	83	60.502	ENSONIG00000004389	pnkd	88	60.502	Oreochromis_niloticus
ENSJJAG00000023559	Pnkd	100	93.868	ENSOCUG00000023754	PNKD	100	92.925	Oryctolagus_cuniculus
ENSJJAG00000023559	Pnkd	82	59.873	ENSORLG00000026276	pnkd	96	55.747	Oryzias_latipes
ENSJJAG00000023559	Pnkd	82	59.873	ENSORLG00020008373	pnkd	97	61.794	Oryzias_latipes_hni
ENSJJAG00000023559	Pnkd	82	59.873	ENSORLG00015005276	pnkd	96	55.747	Oryzias_latipes_hsok
ENSJJAG00000023559	Pnkd	82	60.510	ENSOMEG00000016106	pnkd	97	56.322	Oryzias_melastigma
ENSJJAG00000023559	Pnkd	79	97.386	ENSOGAG00000001792	PNKD	100	97.386	Otolemur_garnettii
ENSJJAG00000023559	Pnkd	100	95.065	ENSOARG00000019505	PNKD	100	94.286	Ovis_aries
ENSJJAG00000023559	Pnkd	100	95.584	ENSPPAG00000034969	PNKD	100	94.545	Pan_paniscus
ENSJJAG00000023559	Pnkd	83	92.476	ENSPPRG00000023720	PNKD	97	85.755	Panthera_pardus
ENSJJAG00000023559	Pnkd	100	87.792	ENSPTIG00000021040	PNKD	100	87.273	Panthera_tigris_altaica
ENSJJAG00000023559	Pnkd	100	95.325	ENSPTRG00000012914	PNKD	100	94.286	Pan_troglodytes
ENSJJAG00000023559	Pnkd	100	95.844	ENSPANG00000005752	PNKD	100	94.805	Papio_anubis
ENSJJAG00000023559	Pnkd	83	58.621	ENSPKIG00000011208	pnkd	99	58.307	Paramormyrops_kingsleyae
ENSJJAG00000023559	Pnkd	79	60.131	ENSPMGG00000005169	pnkd	100	60.131	Periophthalmus_magnuspinnatus
ENSJJAG00000023559	Pnkd	100	95.065	ENSPEMG00000010689	Pnkd	100	94.026	Peromyscus_maniculatus_bairdii
ENSJJAG00000023559	Pnkd	79	54.575	ENSPMAG00000006947	pnkd	99	54.575	Petromyzon_marinus
ENSJJAG00000023559	Pnkd	79	80.392	ENSPCIG00000021457	PNKD	97	71.148	Phascolarctos_cinereus
ENSJJAG00000023559	Pnkd	82	62.102	ENSPFOG00000010628	pnkd	95	58.892	Poecilia_formosa
ENSJJAG00000023559	Pnkd	58	64.732	ENSPLAG00000020583	pnkd	95	60.474	Poecilia_latipinna
ENSJJAG00000023559	Pnkd	67	64.093	ENSPMEG00000006542	pnkd	73	60.417	Poecilia_mexicana
ENSJJAG00000023559	Pnkd	82	61.465	ENSPREG00000014434	pnkd	95	57.895	Poecilia_reticulata
ENSJJAG00000023559	Pnkd	100	95.584	ENSPPYG00000013167	PNKD	100	94.545	Pongo_abelii
ENSJJAG00000023559	Pnkd	100	76.042	ENSPCAG00000003946	PNKD	100	75.781	Procavia_capensis
ENSJJAG00000023559	Pnkd	100	96.883	ENSPCOG00000019839	PNKD	100	96.883	Propithecus_coquereli
ENSJJAG00000023559	Pnkd	83	61.129	ENSPNYG00000016327	pnkd	99	61.129	Pundamilia_nyererei
ENSJJAG00000023559	Pnkd	80	63.782	ENSPNAG00000008655	pnkd	86	63.782	Pygocentrus_nattereri
ENSJJAG00000023559	Pnkd	100	95.584	ENSRNOG00000014806	Pnkd	100	94.545	Rattus_norvegicus
ENSJJAG00000023559	Pnkd	100	95.844	ENSRBIG00000031614	PNKD	100	94.805	Rhinopithecus_bieti
ENSJJAG00000023559	Pnkd	100	95.844	ENSRROG00000045542	PNKD	100	94.805	Rhinopithecus_roxellana
ENSJJAG00000023559	Pnkd	100	95.584	ENSSBOG00000036000	PNKD	100	94.545	Saimiri_boliviensis_boliviensis
ENSJJAG00000023559	Pnkd	79	79.935	ENSSHAG00000016339	PNKD	96	79.612	Sarcophilus_harrisii
ENSJJAG00000023559	Pnkd	79	63.399	ENSSFOG00015013028	pnkd	82	63.399	Scleropages_formosus
ENSJJAG00000023559	Pnkd	83	60.815	ENSSMAG00000006812	pnkd	88	60.815	Scophthalmus_maximus
ENSJJAG00000023559	Pnkd	83	59.875	ENSSDUG00000012538	pnkd	99	56.022	Seriola_dumerili
ENSJJAG00000023559	Pnkd	83	59.875	ENSSLDG00000021431	pnkd	85	59.875	Seriola_lalandi_dorsalis
ENSJJAG00000023559	Pnkd	79	50.327	ENSSPUG00000018454	PNKD	98	52.288	Sphenodon_punctatus
ENSJJAG00000023559	Pnkd	83	60.502	ENSSPAG00000007083	pnkd	99	56.303	Stegastes_partitus
ENSJJAG00000023559	Pnkd	100	95.913	ENSSSCG00000029002	PNKD	100	94.586	Sus_scrofa
ENSJJAG00000023559	Pnkd	83	58.621	ENSTRUG00000009399	pnkd	88	58.621	Takifugu_rubripes
ENSJJAG00000023559	Pnkd	83	58.934	ENSTNIG00000010992	pnkd	88	58.934	Tetraodon_nigroviridis
ENSJJAG00000023559	Pnkd	100	92.987	ENSTTRG00000012895	PNKD	100	92.208	Tursiops_truncatus
ENSJJAG00000023559	Pnkd	83	92.790	ENSUAMG00000000289	PNKD	94	86.726	Ursus_americanus
ENSJJAG00000023559	Pnkd	100	78.442	ENSUMAG00000019639	PNKD	100	77.403	Ursus_maritimus
ENSJJAG00000023559	Pnkd	100	95.238	ENSVVUG00000007348	PNKD	100	93.766	Vulpes_vulpes
ENSJJAG00000023559	Pnkd	79	64.379	ENSXETG00000014931	pnkd	99	64.078	Xenopus_tropicalis
ENSJJAG00000023559	Pnkd	78	64.452	ENSXCOG00000014370	pnkd	93	64.120	Xiphophorus_couchianus