EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000023765 (Gene tree)
Gene ID: 101597505
Gene Symbol: Gpatch1
Alias: 1300003A17Rik|Gpatc1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 57129 bases
Position: chrJH725469.1:4092813-4149941
Accession: 101597505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000024254	DUF1604	PF07713.13	3.9e-35	1	1
ENSJJAP00000024254	G-patch	PF01585.23	3.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000030836	-	2787	XM_004659962	ENSJJAP00000024254	928 (aa)	XP_004660019	UPI000332F3D6

Gene Model

Click here to download ENSJJAG00000023765's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000023765's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000023765	Gpatch1	100	83.244	ENSG00000076650	GPATCH1	91	83.647	Homo_sapiens
ENSJJAG00000023765	Gpatch1	100	79.914	ENSAMEG00000015575	GPATCH1	91	83.746	Ailuropoda_melanoleuca
ENSJJAG00000023765	Gpatch1	81	71.271	ENSAOCG00000006668	gpatch1	75	71.271	Amphiprion_ocellaris
ENSJJAG00000023765	Gpatch1	81	54.961	ENSAPEG00000000026	gpatch1	90	51.508	Amphiprion_percula
ENSJJAG00000023765	Gpatch1	90	51.701	ENSATEG00000014494	gpatch1	90	52.446	Anabas_testudineus
ENSJJAG00000023765	Gpatch1	91	60.987	ENSAPLG00000007584	GPATCH1	96	60.182	Anas_platyrhynchos
ENSJJAG00000023765	Gpatch1	100	83.566	ENSANAG00000027002	GPATCH1	91	84.000	Aotus_nancymaae
ENSJJAG00000023765	Gpatch1	81	54.061	ENSACLG00000024740	gpatch1	82	53.761	Astatotilapia_calliptera
ENSJJAG00000023765	Gpatch1	91	51.148	ENSAMXG00000020177	gpatch1	86	53.998	Astyanax_mexicanus
ENSJJAG00000023765	Gpatch1	91	83.746	ENSBTAG00000000721	GPATCH1	91	83.746	Bos_taurus
ENSJJAG00000023765	Gpatch1	68	30.046	WBGene00011109	R07E5.1	68	30.046	Caenorhabditis_elegans
ENSJJAG00000023765	Gpatch1	100	83.673	ENSCJAG00000000684	GPATCH1	91	84.118	Callithrix_jacchus
ENSJJAG00000023765	Gpatch1	100	80.365	ENSCAFG00000007457	GPATCH1	76	84.118	Canis_familiaris
ENSJJAG00000023765	Gpatch1	94	83.982	ENSCAFG00020019731	GPATCH1	91	84.118	Canis_lupus_dingo
ENSJJAG00000023765	Gpatch1	99	84.490	ENSCHIG00000019626	GPATCH1	92	84.806	Capra_hircus
ENSJJAG00000023765	Gpatch1	97	77.680	ENSCAPG00000008827	GPATCH1	91	77.939	Cavia_aperea
ENSJJAG00000023765	Gpatch1	99	79.828	ENSCPOG00000024477	GPATCH1	91	80.751	Cavia_porcellus
ENSJJAG00000023765	Gpatch1	100	82.277	ENSCCAG00000024676	GPATCH1	91	83.412	Cebus_capucinus
ENSJJAG00000023765	Gpatch1	100	83.888	ENSCATG00000043637	GPATCH1	91	84.353	Cercocebus_atys
ENSJJAG00000023765	Gpatch1	96	80.493	ENSCLAG00000003395	-	92	80.292	Chinchilla_lanigera
ENSJJAG00000023765	Gpatch1	100	81.652	ENSCSAG00000004743	GPATCH1	91	82.021	Chlorocebus_sabaeus
ENSJJAG00000023765	Gpatch1	92	72.538	ENSCHOG00000012865	GPATCH1	89	75.357	Choloepus_hoffmanni
ENSJJAG00000023765	Gpatch1	79	68.126	ENSCPBG00000000666	GPATCH1	92	68.033	Chrysemys_picta_bellii
ENSJJAG00000023765	Gpatch1	68	36.350	ENSCING00000012518	-	84	34.496	Ciona_intestinalis
ENSJJAG00000023765	Gpatch1	90	80.092	ENSCANG00000012540	GPATCH1	90	80.092	Colobus_angolensis_palliatus
ENSJJAG00000023765	Gpatch1	97	81.449	ENSCGRG00001016736	Gpatch1	91	82.147	Cricetulus_griseus_chok1gshd
ENSJJAG00000023765	Gpatch1	93	69.585	ENSCGRG00000005069	Gpatch1	90	68.241	Cricetulus_griseus_crigri
ENSJJAG00000023765	Gpatch1	82	49.689	ENSCSEG00000019456	-	84	63.303	Cynoglossus_semilaevis
ENSJJAG00000023765	Gpatch1	81	53.652	ENSDARG00000033418	gpatch1	91	51.325	Danio_rerio
ENSJJAG00000023765	Gpatch1	91	82.491	ENSDNOG00000005291	GPATCH1	95	82.588	Dasypus_novemcinctus
ENSJJAG00000023765	Gpatch1	94	77.205	ENSDORG00000012546	Gpatch1	95	77.385	Dipodomys_ordii
ENSJJAG00000023765	Gpatch1	82	32.187	FBgn0036386	CG8833	72	33.244	Drosophila_melanogaster
ENSJJAG00000023765	Gpatch1	99	73.102	ENSETEG00000003626	GPATCH1	92	74.118	Echinops_telfairi
ENSJJAG00000023765	Gpatch1	94	36.744	ENSEBUG00000011286	gpatch1	91	37.915	Eptatretus_burgeri
ENSJJAG00000023765	Gpatch1	91	83.274	ENSEASG00005021162	GPATCH1	93	84.375	Equus_asinus_asinus
ENSJJAG00000023765	Gpatch1	94	83.734	ENSECAG00000022743	GPATCH1	88	83.746	Equus_caballus
ENSJJAG00000023765	Gpatch1	78	77.451	ENSEEUG00000012925	GPATCH1	77	77.451	Erinaceus_europaeus
ENSJJAG00000023765	Gpatch1	99	49.336	ENSELUG00000018195	gpatch1	90	51.239	Esox_lucius
ENSJJAG00000023765	Gpatch1	100	83.029	ENSFCAG00000014917	GPATCH1	91	83.392	Felis_catus
ENSJJAG00000023765	Gpatch1	99	61.635	ENSFALG00000007821	GPATCH1	89	61.556	Ficedula_albicollis
ENSJJAG00000023765	Gpatch1	96	79.376	ENSFDAG00000003871	GPATCH1	92	80.316	Fukomys_damarensis
ENSJJAG00000023765	Gpatch1	74	51.276	ENSGMOG00000003830	gpatch1	94	51.276	Gadus_morhua
ENSJJAG00000023765	Gpatch1	93	62.443	ENSGALG00000004839	GPATCH1	94	61.850	Gallus_gallus
ENSJJAG00000023765	Gpatch1	91	48.845	ENSGACG00000017544	gpatch1	94	49.711	Gasterosteus_aculeatus
ENSJJAG00000023765	Gpatch1	99	63.502	ENSGAGG00000010067	GPATCH1	91	64.144	Gopherus_agassizii
ENSJJAG00000023765	Gpatch1	98	82.623	ENSGGOG00000010862	GPATCH1	91	83.636	Gorilla_gorilla
ENSJJAG00000023765	Gpatch1	81	54.476	ENSHBUG00000023462	gpatch1	90	51.653	Haplochromis_burtoni
ENSJJAG00000023765	Gpatch1	100	80.683	ENSHGLG00000009334	GPATCH1	91	80.702	Heterocephalus_glaber_female
ENSJJAG00000023765	Gpatch1	100	80.790	ENSHGLG00100018074	GPATCH1	91	80.819	Heterocephalus_glaber_male
ENSJJAG00000023765	Gpatch1	93	51.987	ENSIPUG00000014977	gpatch1	90	52.686	Ictalurus_punctatus
ENSJJAG00000023765	Gpatch1	100	80.021	ENSSTOG00000003720	GPATCH1	91	83.726	Ictidomys_tridecemlineatus
ENSJJAG00000023765	Gpatch1	90	52.852	ENSKMAG00000017950	gpatch1	89	53.085	Kryptolebias_marmoratus
ENSJJAG00000023765	Gpatch1	81	51.819	ENSLBEG00000026527	gpatch1	89	50.167	Labrus_bergylta
ENSJJAG00000023765	Gpatch1	88	58.454	ENSLACG00000008130	GPATCH1	90	58.333	Latimeria_chalumnae
ENSJJAG00000023765	Gpatch1	99	53.537	ENSLOCG00000001800	gpatch1	90	56.177	Lepisosteus_oculatus
ENSJJAG00000023765	Gpatch1	99	83.351	ENSLAFG00000013589	GPATCH1	94	83.313	Loxodonta_africana
ENSJJAG00000023765	Gpatch1	91	83.784	ENSMFAG00000034418	GPATCH1	95	84.542	Macaca_fascicularis
ENSJJAG00000023765	Gpatch1	100	83.691	ENSMMUG00000011790	GPATCH1	92	84.136	Macaca_mulatta
ENSJJAG00000023765	Gpatch1	100	83.351	ENSMNEG00000045084	GPATCH1	91	83.765	Macaca_nemestrina
ENSJJAG00000023765	Gpatch1	100	73.147	ENSMLEG00000043840	GPATCH1	90	72.588	Mandrillus_leucophaeus
ENSJJAG00000023765	Gpatch1	81	54.061	ENSMZEG00005001926	gpatch1	82	53.761	Maylandia_zebra
ENSJJAG00000023765	Gpatch1	89	63.938	ENSMGAG00000005775	GPATCH1	89	62.618	Meleagris_gallopavo
ENSJJAG00000023765	Gpatch1	90	76.505	ENSMICG00000004829	GPATCH1	93	76.387	Microcebus_murinus
ENSJJAG00000023765	Gpatch1	99	83.621	ENSMOCG00000000174	Gpatch1	92	85.229	Microtus_ochrogaster
ENSJJAG00000023765	Gpatch1	92	47.475	ENSMMOG00000002140	gpatch1	97	47.475	Mola_mola
ENSJJAG00000023765	Gpatch1	100	67.906	ENSMODG00000012226	GPATCH1	90	71.934	Monodelphis_domestica
ENSJJAG00000023765	Gpatch1	99	48.344	ENSMALG00000014386	gpatch1	90	51.267	Monopterus_albus
ENSJJAG00000023765	Gpatch1	100	85.699	ENSMUSG00000063808	Gpatch1	100	93.878	Mus_musculus
ENSJJAG00000023765	Gpatch1	100	84.227	MGP_PahariEiJ_G0012816	Gpatch1	100	94.898	Mus_pahari
ENSJJAG00000023765	Gpatch1	100	85.300	MGP_SPRETEiJ_G0030681	Gpatch1	100	94.898	Mus_spretus
ENSJJAG00000023765	Gpatch1	100	82.922	ENSMPUG00000007658	GPATCH1	91	83.039	Mustela_putorius_furo
ENSJJAG00000023765	Gpatch1	100	83.208	ENSMLUG00000012161	GPATCH1	91	83.373	Myotis_lucifugus
ENSJJAG00000023765	Gpatch1	100	85.899	ENSNGAG00000012455	Gpatch1	91	87.382	Nannospalax_galili
ENSJJAG00000023765	Gpatch1	100	82.814	ENSNLEG00000007659	GPATCH1	91	83.294	Nomascus_leucogenys
ENSJJAG00000023765	Gpatch1	76	67.327	ENSMEUG00000015174	GPATCH1	76	67.327	Notamacropus_eugenii
ENSJJAG00000023765	Gpatch1	99	81.243	ENSODEG00000007103	GPATCH1	91	80.863	Octodon_degus
ENSJJAG00000023765	Gpatch1	82	55.314	ENSONIG00000003302	gpatch1	91	53.551	Oreochromis_niloticus
ENSJJAG00000023765	Gpatch1	99	68.348	ENSOANG00000012732	GPATCH1	91	71.953	Ornithorhynchus_anatinus
ENSJJAG00000023765	Gpatch1	100	80.236	ENSOCUG00000015905	GPATCH1	91	84.688	Oryctolagus_cuniculus
ENSJJAG00000023765	Gpatch1	90	50.351	ENSORLG00000018706	gpatch1	88	50.234	Oryzias_latipes
ENSJJAG00000023765	Gpatch1	90	49.883	ENSOMEG00000022688	gpatch1	90	51.152	Oryzias_melastigma
ENSJJAG00000023765	Gpatch1	85	85.133	ENSOGAG00000004016	GPATCH1	99	85.133	Otolemur_garnettii
ENSJJAG00000023765	Gpatch1	98	83.864	ENSOARG00000004365	GPATCH1	91	84.204	Ovis_aries
ENSJJAG00000023765	Gpatch1	100	83.136	ENSPPAG00000020990	GPATCH1	91	83.529	Pan_paniscus
ENSJJAG00000023765	Gpatch1	100	83.136	ENSPPRG00000017245	GPATCH1	91	83.510	Panthera_pardus
ENSJJAG00000023765	Gpatch1	100	83.996	ENSPTIG00000019649	GPATCH1	91	84.335	Panthera_tigris_altaica
ENSJJAG00000023765	Gpatch1	100	83.029	ENSPTRG00000010803	GPATCH1	91	83.412	Pan_troglodytes
ENSJJAG00000023765	Gpatch1	91	83.784	ENSPANG00000012374	GPATCH1	95	83.882	Papio_anubis
ENSJJAG00000023765	Gpatch1	81	55.203	ENSPKIG00000020745	gpatch1	77	55.429	Paramormyrops_kingsleyae
ENSJJAG00000023765	Gpatch1	100	61.294	ENSPSIG00000013433	GPATCH1	91	63.753	Pelodiscus_sinensis
ENSJJAG00000023765	Gpatch1	100	84.284	ENSPEMG00000000636	Gpatch1	91	85.142	Peromyscus_maniculatus_bairdii
ENSJJAG00000023765	Gpatch1	91	72.170	ENSPCIG00000021003	GPATCH1	95	72.170	Phascolarctos_cinereus
ENSJJAG00000023765	Gpatch1	71	50.523	ENSPREG00000008264	gpatch1	88	47.967	Poecilia_reticulata
ENSJJAG00000023765	Gpatch1	100	80.666	ENSPPYG00000009824	GPATCH1	91	80.824	Pongo_abelii
ENSJJAG00000023765	Gpatch1	83	72.038	ENSPCAG00000005931	GPATCH1	84	72.076	Procavia_capensis
ENSJJAG00000023765	Gpatch1	93	80.184	ENSPCOG00000009674	GPATCH1	97	81.442	Propithecus_coquereli
ENSJJAG00000023765	Gpatch1	84	83.174	ENSPVAG00000017767	GPATCH1	82	93.548	Pteropus_vampyrus
ENSJJAG00000023765	Gpatch1	81	54.814	ENSPNYG00000018189	gpatch1	92	54.410	Pundamilia_nyererei
ENSJJAG00000023765	Gpatch1	90	52.174	ENSPNAG00000013187	gpatch1	90	52.227	Pygocentrus_nattereri
ENSJJAG00000023765	Gpatch1	100	81.613	ENSRNOG00000011584	Gpatch1	91	85.024	Rattus_norvegicus
ENSJJAG00000023765	Gpatch1	100	75.725	ENSRBIG00000034723	GPATCH1	92	76.443	Rhinopithecus_bieti
ENSJJAG00000023765	Gpatch1	100	83.351	ENSRROG00000024428	GPATCH1	91	83.765	Rhinopithecus_roxellana
ENSJJAG00000023765	Gpatch1	100	83.029	ENSSBOG00000034650	GPATCH1	91	83.412	Saimiri_boliviensis_boliviensis
ENSJJAG00000023765	Gpatch1	99	70.708	ENSSHAG00000016016	GPATCH1	90	71.849	Sarcophilus_harrisii
ENSJJAG00000023765	Gpatch1	81	54.188	ENSSFOG00015011535	gpatch1	89	52.710	Scleropages_formosus
ENSJJAG00000023765	Gpatch1	99	44.608	ENSSMAG00000002883	gpatch1	93	47.948	Scophthalmus_maximus
ENSJJAG00000023765	Gpatch1	81	52.559	ENSSDUG00000007444	gpatch1	90	50.891	Seriola_dumerili
ENSJJAG00000023765	Gpatch1	81	52.868	ENSSLDG00000002856	gpatch1	92	53.688	Seriola_lalandi_dorsalis
ENSJJAG00000023765	Gpatch1	73	83.383	ENSSARG00000004108	GPATCH1	72	83.383	Sorex_araneus
ENSJJAG00000023765	Gpatch1	91	83.628	ENSSSCG00000002865	GPATCH1	94	83.628	Sus_scrofa
ENSJJAG00000023765	Gpatch1	99	63.344	ENSTGUG00000009401	GPATCH1	91	63.765	Taeniopygia_guttata
ENSJJAG00000023765	Gpatch1	81	52.480	ENSTRUG00000005785	-	90	50.058	Takifugu_rubripes
ENSJJAG00000023765	Gpatch1	81	52.480	ENSTRUG00000025081	gpatch1	90	50.058	Takifugu_rubripes
ENSJJAG00000023765	Gpatch1	81	54.416	ENSTNIG00000002554	gpatch1	97	55.052	Tetraodon_nigroviridis
ENSJJAG00000023765	Gpatch1	64	72.397	ENSTBEG00000007750	-	84	72.397	Tupaia_belangeri
ENSJJAG00000023765	Gpatch1	91	75.822	ENSTTRG00000012221	GPATCH1	91	75.822	Tursiops_truncatus
ENSJJAG00000023765	Gpatch1	90	83.690	ENSUMAG00000014645	GPATCH1	96	83.478	Ursus_maritimus
ENSJJAG00000023765	Gpatch1	80	93.714	ENSVPAG00000010313	GPATCH1	86	94.022	Vicugna_pacos
ENSJJAG00000023765	Gpatch1	94	83.867	ENSVVUG00000016572	GPATCH1	91	84.000	Vulpes_vulpes
ENSJJAG00000023765	Gpatch1	100	50.682	ENSXETG00000018276	gpatch1	93	55.855	Xenopus_tropicalis