EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000023928 (Gene tree)
Gene ID: 101605800
Gene Symbol: -
Alias: -
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 37491 bases
Position: chrJH725460.1:10618741-10656231
Accession: 101605800
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000024483	GUCT	PF08152.12	5.4e-28	1	1
ENSJJAP00000024483	ResIII	PF04851.15	8.1e-10	1	1
ENSJJAP00000024483	DEAD	PF00270.29	3.2e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000031065	-	2527	XM_004657881	ENSJJAP00000024483	736 (aa)	XP_004657938	UPI000333394A

Gene Model

Click here to download ENSJJAG00000023928's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000023928's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000023928	-	100	76.486	ENSJJAG00000019626	-	100	75.541
ENSJJAG00000023928	-	50	33.854	ENSJJAG00000017042	-	54	33.684
ENSJJAG00000023928	-	52	30.846	ENSJJAG00000008682	-	92	30.846
ENSJJAG00000023928	-	72	70.974	ENSJJAG00000014035	Ddx21	68	70.501
ENSJJAG00000023928	-	55	33.803	ENSJJAG00000009056	Ddx27	55	33.175
ENSJJAG00000023928	-	50	33.770	ENSJJAG00000023769	-	54	33.598
ENSJJAG00000023928	-	50	32.800	ENSJJAG00000022783	-	89	32.258
ENSJJAG00000023928	-	50	32.620	ENSJJAG00000015870	-	86	32.620

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000023928	-	92	94.838	ENSG00000107625	DDX50	100	94.980	Homo_sapiens
ENSJJAG00000023928	-	93	94.143	ENSAMEG00000017992	DDX50	100	94.173	Ailuropoda_melanoleuca
ENSJJAG00000023928	-	92	75.543	ENSANAG00000017785	-	100	77.200	Aotus_nancymaae
ENSJJAG00000023928	-	100	94.030	ENSBTAG00000033413	DDX50	100	94.030	Bos_taurus
ENSJJAG00000023928	-	92	94.985	ENSCJAG00000018844	DDX50	99	97.082	Callithrix_jacchus
ENSJJAG00000023928	-	93	94.436	ENSCAFG00000013776	DDX50	100	94.444	Canis_familiaris
ENSJJAG00000023928	-	93	94.436	ENSCAFG00020025977	DDX50	99	94.444	Canis_lupus_dingo
ENSJJAG00000023928	-	100	93.894	ENSCHIG00000000285	DDX50	99	93.894	Capra_hircus
ENSJJAG00000023928	-	92	94.690	ENSTSYG00000004192	DDX50	99	96.524	Carlito_syrichta
ENSJJAG00000023928	-	88	77.364	ENSCAPG00000007230	-	97	78.561	Cavia_aperea
ENSJJAG00000023928	-	91	94.205	ENSCPOG00000002131	-	100	94.030	Cavia_porcellus
ENSJJAG00000023928	-	82	92.473	ENSCCAG00000030543	DDX50	100	86.310	Cebus_capucinus
ENSJJAG00000023928	-	98	69.337	ENSCATG00000035153	-	89	88.401	Cercocebus_atys
ENSJJAG00000023928	-	99	64.865	ENSCATG00000039259	-	97	68.919	Cercocebus_atys
ENSJJAG00000023928	-	90	96.386	ENSCATG00000032463	DDX50	99	92.527	Cercocebus_atys
ENSJJAG00000023928	-	97	68.583	ENSCLAG00000001938	-	99	67.181	Chinchilla_lanigera
ENSJJAG00000023928	-	50	85.637	ENSCLAG00000001553	-	95	85.637	Chinchilla_lanigera
ENSJJAG00000023928	-	92	94.838	ENSCLAG00000012957	-	100	94.980	Chinchilla_lanigera
ENSJJAG00000023928	-	92	94.985	ENSCSAG00000007703	DDX50	100	95.115	Chlorocebus_sabaeus
ENSJJAG00000023928	-	88	92.747	ENSCHOG00000000233	DDX50	97	92.747	Choloepus_hoffmanni
ENSJJAG00000023928	-	92	80.088	ENSCANG00000036450	-	100	81.411	Colobus_angolensis_palliatus
ENSJJAG00000023928	-	96	66.713	ENSCANG00000028077	-	99	64.507	Colobus_angolensis_palliatus
ENSJJAG00000023928	-	86	70.662	ENSCANG00000018820	-	98	68.927	Colobus_angolensis_palliatus
ENSJJAG00000023928	-	92	94.248	ENSCGRG00001020223	Ddx50	100	94.030	Cricetulus_griseus_chok1gshd
ENSJJAG00000023928	-	92	94.370	ENSCGRG00000015884	Ddx50	100	93.623	Cricetulus_griseus_crigri
ENSJJAG00000023928	-	88	87.500	ENSDNOG00000001675	DDX50	100	87.500	Dasypus_novemcinctus
ENSJJAG00000023928	-	92	94.395	ENSDORG00000007310	Ddx50	100	94.437	Dipodomys_ordii
ENSJJAG00000023928	-	90	96.239	ENSETEG00000014069	DDX50	90	96.239	Echinops_telfairi
ENSJJAG00000023928	-	93	94.282	ENSEASG00005015595	DDX50	99	94.301	Equus_asinus_asinus
ENSJJAG00000023928	-	93	94.282	ENSECAG00000023044	DDX50	99	94.301	Equus_caballus
ENSJJAG00000023928	-	89	94.089	ENSEEUG00000005782	DDX50	89	91.054	Erinaceus_europaeus
ENSJJAG00000023928	-	92	94.845	ENSFCAG00000012678	DDX50	99	94.986	Felis_catus
ENSJJAG00000023928	-	92	87.758	ENSFDAG00000016109	-	100	88.467	Fukomys_damarensis
ENSJJAG00000023928	-	51	80.688	ENSGGOG00000041063	-	96	74.339	Gorilla_gorilla
ENSJJAG00000023928	-	52	69.271	ENSGGOG00000022568	-	100	70.312	Gorilla_gorilla
ENSJJAG00000023928	-	92	94.838	ENSGGOG00000010100	DDX50	99	97.594	Gorilla_gorilla
ENSJJAG00000023928	-	92	93.363	ENSHGLG00000013466	DDX50	100	93.487	Heterocephalus_glaber_female
ENSJJAG00000023928	-	92	93.363	ENSHGLG00100017191	DDX50	100	93.487	Heterocephalus_glaber_male
ENSJJAG00000023928	-	82	86.170	ENSHGLG00100006568	-	98	76.442	Heterocephalus_glaber_male
ENSJJAG00000023928	-	100	93.225	ENSSTOG00000021852	-	100	93.225	Ictidomys_tridecemlineatus
ENSJJAG00000023928	-	92	94.543	ENSLAFG00000006186	DDX50	100	93.487	Loxodonta_africana
ENSJJAG00000023928	-	98	69.655	ENSMFAG00000045339	-	89	87.461	Macaca_fascicularis
ENSJJAG00000023928	-	92	94.985	ENSMFAG00000044067	DDX50	100	95.115	Macaca_fascicularis
ENSJJAG00000023928	-	91	96.429	ENSMMUG00000001006	DDX50	100	96.429	Macaca_mulatta
ENSJJAG00000023928	-	92	63.824	ENSMMUG00000045343	-	99	59.973	Macaca_mulatta
ENSJJAG00000023928	-	92	88.053	ENSMNEG00000031664	DDX50	100	88.738	Macaca_nemestrina
ENSJJAG00000023928	-	98	70.759	ENSMNEG00000045530	-	89	88.715	Macaca_nemestrina
ENSJJAG00000023928	-	92	92.920	ENSMLEG00000037313	DDX50	100	93.216	Mandrillus_leucophaeus
ENSJJAG00000023928	-	98	68.552	ENSMLEG00000041988	-	96	75.661	Mandrillus_leucophaeus
ENSJJAG00000023928	-	56	92.252	ENSMAUG00000022192	Ddx50	100	92.252	Mesocricetus_auratus
ENSJJAG00000023928	-	100	87.636	ENSMICG00000017539	DDX50	100	87.636	Microcebus_murinus
ENSJJAG00000023928	-	92	93.824	ENSMOCG00000001676	Ddx50	100	93.640	Microtus_ochrogaster
ENSJJAG00000023928	-	92	78.739	ENSMODG00000010741	DDX50	92	78.801	Monodelphis_domestica
ENSJJAG00000023928	-	92	92.910	MGP_CAROLIEiJ_G0015389	Ddx50	100	93.886	Mus_caroli
ENSJJAG00000023928	-	92	93.796	ENSMUSG00000020076	Ddx50	100	94.158	Mus_musculus
ENSJJAG00000023928	-	92	93.648	MGP_PahariEiJ_G0030805	Ddx50	100	94.022	Mus_pahari
ENSJJAG00000023928	-	92	93.796	MGP_SPRETEiJ_G0016200	Ddx50	100	94.158	Mus_spretus
ENSJJAG00000023928	-	88	93.981	ENSMPUG00000004589	DDX50	99	93.981	Mustela_putorius_furo
ENSJJAG00000023928	-	92	92.478	ENSMLUG00000017590	DDX50	100	92.537	Myotis_lucifugus
ENSJJAG00000023928	-	92	94.985	ENSNGAG00000004283	Ddx50	100	94.980	Nannospalax_galili
ENSJJAG00000023928	-	88	67.130	ENSNLEG00000035506	-	88	76.636	Nomascus_leucogenys
ENSJJAG00000023928	-	92	94.838	ENSNLEG00000011631	DDX50	100	94.980	Nomascus_leucogenys
ENSJJAG00000023928	-	92	91.888	ENSOPRG00000001619	DDX50	100	90.231	Ochotona_princeps
ENSJJAG00000023928	-	92	93.363	ENSODEG00000014597	-	100	93.758	Octodon_degus
ENSJJAG00000023928	-	93	66.571	ENSOANG00000004776	DDX50	82	67.023	Ornithorhynchus_anatinus
ENSJJAG00000023928	-	95	91.679	ENSOCUG00000002879	DDX50	100	91.599	Oryctolagus_cuniculus
ENSJJAG00000023928	-	92	94.395	ENSOGAG00000001844	DDX50	100	94.573	Otolemur_garnettii
ENSJJAG00000023928	-	100	93.758	ENSOARG00000005264	DDX50	99	93.758	Ovis_aries
ENSJJAG00000023928	-	52	69.211	ENSPPAG00000026788	-	99	70.263	Pan_paniscus
ENSJJAG00000023928	-	92	94.690	ENSPPAG00000040723	DDX50	100	94.844	Pan_paniscus
ENSJJAG00000023928	-	92	94.845	ENSPPRG00000015826	DDX50	100	94.986	Panthera_pardus
ENSJJAG00000023928	-	92	94.845	ENSPTIG00000008454	DDX50	100	94.986	Panthera_tigris_altaica
ENSJJAG00000023928	-	52	69.211	ENSPTRG00000044913	-	99	68.947	Pan_troglodytes
ENSJJAG00000023928	-	92	94.690	ENSPTRG00000002562	DDX50	100	94.844	Pan_troglodytes
ENSJJAG00000023928	-	92	87.463	ENSPANG00000022143	-	100	88.195	Papio_anubis
ENSJJAG00000023928	-	92	92.773	ENSPEMG00000020899	-	100	91.180	Peromyscus_maniculatus_bairdii
ENSJJAG00000023928	-	95	77.066	ENSPCIG00000016036	DDX50	94	78.624	Phascolarctos_cinereus
ENSJJAG00000023928	-	91	96.280	ENSPPYG00000002390	DDX50	100	96.280	Pongo_abelii
ENSJJAG00000023928	-	83	79.837	ENSPCAG00000009692	DDX50	99	79.837	Procavia_capensis
ENSJJAG00000023928	-	79	83.946	ENSPCOG00000012574	DDX50	90	83.946	Propithecus_coquereli
ENSJJAG00000023928	-	86	90.358	ENSPVAG00000009519	DDX50	86	90.358	Pteropus_vampyrus
ENSJJAG00000023928	-	92	93.205	ENSRNOG00000000396	Ddx50	98	97.059	Rattus_norvegicus
ENSJJAG00000023928	-	87	93.157	ENSRBIG00000042841	-	98	96.194	Rhinopithecus_bieti
ENSJJAG00000023928	-	99	64.411	ENSRBIG00000039673	-	99	63.599	Rhinopithecus_bieti
ENSJJAG00000023928	-	99	66.439	ENSRBIG00000036573	-	97	74.133	Rhinopithecus_bieti
ENSJJAG00000023928	-	91	96.413	ENSRROG00000032158	DDX50	99	96.413	Rhinopithecus_roxellana
ENSJJAG00000023928	-	99	63.587	ENSRROG00000022853	-	99	70.620	Rhinopithecus_roxellana
ENSJJAG00000023928	-	52	69.713	ENSRROG00000031940	-	97	66.146	Rhinopithecus_roxellana
ENSJJAG00000023928	-	92	83.333	ENSSBOG00000014441	DDX50	100	84.261	Saimiri_boliviensis_boliviensis
ENSJJAG00000023928	-	74	71.691	ENSSHAG00000005334	-	90	62.135	Sarcophilus_harrisii
ENSJJAG00000023928	-	88	80.371	ENSSHAG00000005690	DDX50	90	80.431	Sarcophilus_harrisii
ENSJJAG00000023928	-	100	78.668	ENSSARG00000013553	DDX50	88	85.093	Sorex_araneus
ENSJJAG00000023928	-	100	93.623	ENSSSCG00000010246	DDX50	99	93.623	Sus_scrofa
ENSJJAG00000023928	-	96	72.996	ENSTBEG00000001085	DDX50	100	73.035	Tupaia_belangeri
ENSJJAG00000023928	-	92	87.021	ENSTTRG00000012408	DDX50	99	87.653	Tursiops_truncatus
ENSJJAG00000023928	-	93	94.290	ENSUAMG00000010976	DDX50	99	97.270	Ursus_americanus
ENSJJAG00000023928	-	93	94.290	ENSUMAG00000007726	DDX50	99	94.309	Ursus_maritimus
ENSJJAG00000023928	-	92	93.805	ENSVPAG00000000626	DDX50	100	94.030	Vicugna_pacos
ENSJJAG00000023928	-	81	89.351	ENSVVUG00000020366	DDX50	98	97.326	Vulpes_vulpes