EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000024340 (Gene tree)
Gene ID: 101610363
Gene Symbol: Papola
Alias: -
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 67760 bases
Position: chrJH725518.1:5931115-5998874
Accession: 101610363
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000025047	PAP_RNA-bind	PF04926.15	3.6e-24	1	1
ENSJJAP00000025046	PAP_RNA-bind	PF04926.15	3.7e-24	1	1
ENSJJAP00000025044	PAP_RNA-bind	PF04926.15	3.8e-24	1	1
ENSJJAP00000025045	PAP_RNA-bind	PF04926.15	5.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000031634	-	2067	-	ENSJJAP00000025047	688 (aa)	-	-
ENSJJAT00000031631	-	2420	XM_012950406	ENSJJAP00000025044	734 (aa)	XP_012805860	-
ENSJJAT00000031632	-	2193	-	ENSJJAP00000025045	730 (aa)	-	-
ENSJJAT00000031633	-	2142	-	ENSJJAP00000025046	713 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000024340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000024340's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000024340	Papola	92	84.796	ENSJJAG00000012212	Papolb	92	84.796
ENSJJAG00000024340	Papola	60	81.446	ENSJJAG00000015601	Papolg	97	81.446

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000024340	Papola	100	96.533	ENSG00000090060	PAPOLA	97	98.913	Homo_sapiens
ENSJJAG00000024340	Papola	100	96.477	ENSAMEG00000014142	PAPOLA	99	96.477	Ailuropoda_melanoleuca
ENSJJAG00000024340	Papola	100	90.921	ENSAPLG00000006645	PAPOLA	99	90.921	Anas_platyrhynchos
ENSJJAG00000024340	Papola	100	91.588	ENSACAG00000013474	PAPOLA	99	94.817	Anolis_carolinensis
ENSJJAG00000024340	Papola	100	97.391	ENSANAG00000018274	PAPOLA	99	98.529	Aotus_nancymaae
ENSJJAG00000024340	Papola	77	90.772	ENSANAG00000027941	-	98	90.772	Aotus_nancymaae
ENSJJAG00000024340	Papola	100	73.429	ENSAMXG00000018141	papola	98	85.145	Astyanax_mexicanus
ENSJJAG00000024340	Papola	100	97.246	ENSBTAG00000004054	PAPOLA	99	97.246	Bos_taurus
ENSJJAG00000024340	Papola	100	96.983	ENSCJAG00000006512	PAPOLA	99	98.529	Callithrix_jacchus
ENSJJAG00000024340	Papola	100	97.011	ENSCAFG00000017783	PAPOLA	99	97.011	Canis_familiaris
ENSJJAG00000024340	Papola	99	97.199	ENSCAFG00020011550	PAPOLA	99	97.199	Canis_lupus_dingo
ENSJJAG00000024340	Papola	99	96.458	ENSCHIG00000025004	-	99	96.458	Capra_hircus
ENSJJAG00000024340	Papola	100	96.667	ENSTSYG00000012384	PAPOLA	99	96.667	Carlito_syrichta
ENSJJAG00000024340	Papola	100	92.899	ENSCPOG00000002648	PAPOLA	99	92.899	Cavia_porcellus
ENSJJAG00000024340	Papola	100	96.394	ENSCCAG00000025120	PAPOLA	97	98.510	Cebus_capucinus
ENSJJAG00000024340	Papola	100	97.126	ENSCATG00000018815	PAPOLA	99	98.696	Cercocebus_atys
ENSJJAG00000024340	Papola	100	97.101	ENSCLAG00000016342	PAPOLA	99	97.101	Chinchilla_lanigera
ENSJJAG00000024340	Papola	100	96.092	ENSCSAG00000010516	PAPOLA	99	96.092	Chlorocebus_sabaeus
ENSJJAG00000024340	Papola	72	80.864	ENSCHOG00000001115	PAPOLA	71	80.864	Choloepus_hoffmanni
ENSJJAG00000024340	Papola	100	91.995	ENSCPBG00000024125	PAPOLA	99	91.995	Chrysemys_picta_bellii
ENSJJAG00000024340	Papola	100	91.262	ENSCANG00000000159	PAPOLA	99	91.262	Colobus_angolensis_palliatus
ENSJJAG00000024340	Papola	100	96.812	ENSCGRG00001022693	-	99	96.812	Cricetulus_griseus_chok1gshd
ENSJJAG00000024340	Papola	99	83.129	ENSCGRG00001002732	-	99	83.129	Cricetulus_griseus_chok1gshd
ENSJJAG00000024340	Papola	100	87.228	ENSCGRG00001000229	-	98	89.251	Cricetulus_griseus_chok1gshd
ENSJJAG00000024340	Papola	98	80.165	ENSCGRG00000001888	-	96	79.614	Cricetulus_griseus_crigri
ENSJJAG00000024340	Papola	100	83.499	ENSCGRG00000000257	-	99	83.499	Cricetulus_griseus_crigri
ENSJJAG00000024340	Papola	100	96.812	ENSCGRG00000003664	-	100	96.812	Cricetulus_griseus_crigri
ENSJJAG00000024340	Papola	70	53.527	ENSCSEG00000001841	-	74	52.716	Cynoglossus_semilaevis
ENSJJAG00000024340	Papola	100	71.093	ENSDARG00000009585	papola	99	70.678	Danio_rerio
ENSJJAG00000024340	Papola	65	88.703	ENSDORG00000013415	-	100	90.042	Dipodomys_ordii
ENSJJAG00000024340	Papola	100	82.497	ENSETEG00000004889	PAPOLA	100	82.497	Echinops_telfairi
ENSJJAG00000024340	Papola	98	69.771	ENSELUG00000018972	papola	98	70.163	Esox_lucius
ENSJJAG00000024340	Papola	100	98.261	ENSFCAG00000006784	PAPOLA	99	98.261	Felis_catus
ENSJJAG00000024340	Papola	100	93.750	ENSFALG00000002547	PAPOLA	98	87.895	Ficedula_albicollis
ENSJJAG00000024340	Papola	100	95.652	ENSFDAG00000010370	PAPOLA	100	95.652	Fukomys_damarensis
ENSJJAG00000024340	Papola	73	65.746	ENSGMOG00000010209	papola	100	66.604	Gadus_morhua
ENSJJAG00000024340	Papola	100	90.502	ENSGALG00000033099	PAPOLA	99	90.502	Gallus_gallus
ENSJJAG00000024340	Papola	70	54.583	ENSGACG00000006142	-	100	54.167	Gasterosteus_aculeatus
ENSJJAG00000024340	Papola	93	94.729	ENSGAGG00000020500	PAPOLA	99	94.537	Gopherus_agassizii
ENSJJAG00000024340	Papola	100	96.533	ENSGGOG00000006287	PAPOLA	99	96.533	Gorilla_gorilla
ENSJJAG00000024340	Papola	99	83.379	ENSHGLG00000017457	-	100	83.106	Heterocephalus_glaber_female
ENSJJAG00000024340	Papola	100	96.667	ENSHGLG00000007909	-	99	96.667	Heterocephalus_glaber_female
ENSJJAG00000024340	Papola	100	77.853	ENSHGLG00000007467	-	99	77.446	Heterocephalus_glaber_female
ENSJJAG00000024340	Papola	100	96.522	ENSHGLG00100017273	PAPOLA	99	96.522	Heterocephalus_glaber_male
ENSJJAG00000024340	Papola	99	68.077	ENSIPUG00000005919	papola	99	67.344	Ictalurus_punctatus
ENSJJAG00000024340	Papola	100	97.681	ENSSTOG00000011471	PAPOLA	99	97.681	Ictidomys_tridecemlineatus
ENSJJAG00000024340	Papola	100	76.383	ENSLACG00000018136	PAPOLA	99	76.383	Latimeria_chalumnae
ENSJJAG00000024340	Papola	100	65.369	ENSLOCG00000008632	papola	99	65.909	Lepisosteus_oculatus
ENSJJAG00000024340	Papola	100	95.516	ENSLAFG00000000946	PAPOLA	99	95.516	Loxodonta_africana
ENSJJAG00000024340	Papola	100	96.533	ENSMFAG00000001792	PAPOLA	99	98.706	Macaca_fascicularis
ENSJJAG00000024340	Papola	100	97.126	ENSMMUG00000018610	PAPOLA	99	97.126	Macaca_mulatta
ENSJJAG00000024340	Papola	100	97.126	ENSMNEG00000043747	PAPOLA	99	97.610	Macaca_nemestrina
ENSJJAG00000024340	Papola	100	96.533	ENSMLEG00000032066	PAPOLA	99	96.533	Mandrillus_leucophaeus
ENSJJAG00000024340	Papola	84	89.389	ENSMGAG00000013228	-	100	89.389	Meleagris_gallopavo
ENSJJAG00000024340	Papola	100	97.246	ENSMAUG00000017178	Papola	99	97.246	Mesocricetus_auratus
ENSJJAG00000024340	Papola	100	97.826	ENSMICG00000010347	PAPOLA	99	97.826	Microcebus_murinus
ENSJJAG00000024340	Papola	100	97.246	ENSMOCG00000021670	Papola	99	97.246	Microtus_ochrogaster
ENSJJAG00000024340	Papola	100	95.380	ENSMODG00000012887	-	99	95.380	Monodelphis_domestica
ENSJJAG00000024340	Papola	99	81.729	ENSMODG00000001969	-	99	81.729	Monodelphis_domestica
ENSJJAG00000024340	Papola	100	96.232	MGP_CAROLIEiJ_G0018093	Papola	99	96.232	Mus_caroli
ENSJJAG00000024340	Papola	100	96.522	ENSMUSG00000021111	Papola	99	96.522	Mus_musculus
ENSJJAG00000024340	Papola	100	96.522	MGP_PahariEiJ_G0029850	Papola	99	96.522	Mus_pahari
ENSJJAG00000024340	Papola	100	96.667	MGP_SPRETEiJ_G0018943	Papola	99	96.667	Mus_spretus
ENSJJAG00000024340	Papola	100	97.011	ENSMPUG00000003054	PAPOLA	99	97.011	Mustela_putorius_furo
ENSJJAG00000024340	Papola	100	94.837	ENSMLUG00000010922	PAPOLA	99	94.837	Myotis_lucifugus
ENSJJAG00000024340	Papola	100	96.377	ENSNGAG00000022172	Papola	99	96.377	Nannospalax_galili
ENSJJAG00000024340	Papola	100	91.773	ENSNLEG00000000625	PAPOLA	99	92.005	Nomascus_leucogenys
ENSJJAG00000024340	Papola	64	87.342	ENSMEUG00000007831	-	74	83.465	Notamacropus_eugenii
ENSJJAG00000024340	Papola	98	90.291	ENSOPRG00000007625	PAPOLA	100	90.291	Ochotona_princeps
ENSJJAG00000024340	Papola	69	54.622	ENSONIG00000001062	-	96	54.622	Oreochromis_niloticus
ENSJJAG00000024340	Papola	100	96.522	ENSOANG00000013812	PAPOLA	99	96.522	Ornithorhynchus_anatinus
ENSJJAG00000024340	Papola	100	93.351	ENSOCUG00000011531	PAPOLA	99	93.351	Oryctolagus_cuniculus
ENSJJAG00000024340	Papola	100	97.015	ENSOGAG00000004611	PAPOLA	99	97.015	Otolemur_garnettii
ENSJJAG00000024340	Papola	100	96.332	ENSOARG00000016579	-	99	96.332	Ovis_aries
ENSJJAG00000024340	Papola	100	96.533	ENSPPAG00000030505	PAPOLA	99	96.533	Pan_paniscus
ENSJJAG00000024340	Papola	100	97.622	ENSPPRG00000008616	PAPOLA	99	97.622	Panthera_pardus
ENSJJAG00000024340	Papola	100	97.622	ENSPTIG00000018852	PAPOLA	99	97.622	Panthera_tigris_altaica
ENSJJAG00000024340	Papola	100	96.533	ENSPTRG00000006704	PAPOLA	99	96.533	Pan_troglodytes
ENSJJAG00000024340	Papola	100	97.126	ENSPANG00000025582	PAPOLA	98	98.696	Papio_anubis
ENSJJAG00000024340	Papola	99	70.718	ENSPKIG00000014471	papola	99	71.409	Paramormyrops_kingsleyae
ENSJJAG00000024340	Papola	100	92.402	ENSPSIG00000014157	PAPOLA	86	92.402	Pelodiscus_sinensis
ENSJJAG00000024340	Papola	100	97.101	ENSPEMG00000000043	Papola	99	97.101	Peromyscus_maniculatus_bairdii
ENSJJAG00000024340	Papola	100	94.980	ENSPCIG00000013234	PAPOLA	99	95.468	Phascolarctos_cinereus
ENSJJAG00000024340	Papola	100	93.801	ENSPPYG00000006128	PAPOLA	99	93.801	Pongo_abelii
ENSJJAG00000024340	Papola	89	90.244	ENSPCAG00000004199	PAPOLA	100	90.244	Procavia_capensis
ENSJJAG00000024340	Papola	100	94.126	ENSPCOG00000022117	PAPOLA	99	94.126	Propithecus_coquereli
ENSJJAG00000024340	Papola	100	95.380	ENSPVAG00000013925	PAPOLA	99	95.380	Pteropus_vampyrus
ENSJJAG00000024340	Papola	100	72.096	ENSPNAG00000010467	papola	99	71.589	Pygocentrus_nattereri
ENSJJAG00000024340	Papola	100	94.701	ENSRNOG00000004827	Papola	99	94.701	Rattus_norvegicus
ENSJJAG00000024340	Papola	100	96.408	ENSRBIG00000038490	PAPOLA	99	96.408	Rhinopithecus_bieti
ENSJJAG00000024340	Papola	100	96.533	ENSRROG00000025545	PAPOLA	99	96.533	Rhinopithecus_roxellana
ENSJJAG00000024340	Papola	100	96.983	ENSSBOG00000024061	PAPOLA	99	97.222	Saimiri_boliviensis_boliviensis
ENSJJAG00000024340	Papola	100	94.837	ENSSHAG00000015211	PAPOLA	99	94.837	Sarcophilus_harrisii
ENSJJAG00000024340	Papola	98	72.090	ENSSFOG00015004431	papola	99	84.964	Scleropages_formosus
ENSJJAG00000024340	Papola	98	48.235	ENSSDUG00000018247	-	97	47.941	Seriola_dumerili
ENSJJAG00000024340	Papola	98	92.116	ENSSPUG00000005835	PAPOLA	99	91.995	Sphenodon_punctatus
ENSJJAG00000024340	Papola	100	97.971	ENSSSCG00000002505	-	99	97.971	Sus_scrofa
ENSJJAG00000024340	Papola	100	90.638	ENSTGUG00000012687	PAPOLA	99	90.638	Taeniopygia_guttata
ENSJJAG00000024340	Papola	75	87.772	ENSTBEG00000000194	PAPOLA	75	87.772	Tupaia_belangeri
ENSJJAG00000024340	Papola	80	96.875	ENSTTRG00000005717	PAPOLA	80	89.729	Tursiops_truncatus
ENSJJAG00000024340	Papola	61	99.052	ENSUAMG00000025737	PAPOLA	98	99.052	Ursus_americanus
ENSJJAG00000024340	Papola	100	96.196	ENSVPAG00000006464	PAPOLA	100	96.196	Vicugna_pacos
ENSJJAG00000024340	Papola	100	98.116	ENSVVUG00000028340	PAPOLA	99	98.116	Vulpes_vulpes
ENSJJAG00000024340	Papola	100	82.679	ENSXETG00000013949	papola	99	82.679	Xenopus_tropicalis