EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000024388 (Gene tree)
Gene ID: 101601879
Gene Symbol: Ptcd2
Alias: 1190005P08Rik
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 40642 bases
Position: chrJH725441.1:26083670-26124311
Accession: 101601879
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000025116	MRP-S27	PF10037.9	2.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000031703	-	1152	XM_004651544	ENSJJAP00000025116	383 (aa)	XP_004651601	UPI000333467F

Gene Model

Click here to download ENSJJAG00000024388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000024388's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000024388	Ptcd2	100	78.329	ENSG00000049883	PTCD2	100	81.773	Homo_sapiens
ENSJJAG00000024388	Ptcd2	91	47.989	ENSAPOG00000020682	ptcd2	91	47.989	Acanthochromis_polyacanthus
ENSJJAG00000024388	Ptcd2	100	74.935	ENSAMEG00000007194	PTCD2	99	74.935	Ailuropoda_melanoleuca
ENSJJAG00000024388	Ptcd2	90	43.714	ENSACIG00000002053	ptcd2	100	43.714	Amphilophus_citrinellus
ENSJJAG00000024388	Ptcd2	91	47.414	ENSAOCG00000006616	ptcd2	89	47.414	Amphiprion_ocellaris
ENSJJAG00000024388	Ptcd2	91	47.414	ENSAPEG00000022926	ptcd2	89	47.414	Amphiprion_percula
ENSJJAG00000024388	Ptcd2	99	55.643	ENSACAG00000009747	PTCD2	97	55.643	Anolis_carolinensis
ENSJJAG00000024388	Ptcd2	100	78.590	ENSANAG00000029353	PTCD2	99	78.590	Aotus_nancymaae
ENSJJAG00000024388	Ptcd2	91	46.991	ENSACLG00000027742	ptcd2	89	46.991	Astatotilapia_calliptera
ENSJJAG00000024388	Ptcd2	86	43.505	ENSAMXG00000029404	ptcd2	88	43.505	Astyanax_mexicanus
ENSJJAG00000024388	Ptcd2	100	76.042	ENSBTAG00000014675	PTCD2	100	76.042	Bos_taurus
ENSJJAG00000024388	Ptcd2	100	77.546	ENSCJAG00000016364	PTCD2	99	77.546	Callithrix_jacchus
ENSJJAG00000024388	Ptcd2	100	74.413	ENSCAFG00000007982	PTCD2	90	74.413	Canis_familiaris
ENSJJAG00000024388	Ptcd2	90	77.168	ENSCAFG00020019147	PTCD2	97	77.168	Canis_lupus_dingo
ENSJJAG00000024388	Ptcd2	100	78.646	ENSCHIG00000017118	PTCD2	100	78.646	Capra_hircus
ENSJJAG00000024388	Ptcd2	100	73.368	ENSCPOG00000040168	PTCD2	100	73.368	Cavia_porcellus
ENSJJAG00000024388	Ptcd2	84	71.250	ENSCCAG00000021996	-	99	71.250	Cebus_capucinus
ENSJJAG00000024388	Ptcd2	100	77.023	ENSCCAG00000029389	-	99	77.023	Cebus_capucinus
ENSJJAG00000024388	Ptcd2	100	77.285	ENSCATG00000019069	PTCD2	100	77.285	Cercocebus_atys
ENSJJAG00000024388	Ptcd2	100	73.890	ENSCLAG00000000072	PTCD2	100	73.890	Chinchilla_lanigera
ENSJJAG00000024388	Ptcd2	100	77.807	ENSCSAG00000015623	PTCD2	100	77.807	Chlorocebus_sabaeus
ENSJJAG00000024388	Ptcd2	90	56.609	ENSCHOG00000010634	PTCD2	100	56.034	Choloepus_hoffmanni
ENSJJAG00000024388	Ptcd2	94	56.233	ENSCPBG00000000216	PTCD2	93	56.233	Chrysemys_picta_bellii
ENSJJAG00000024388	Ptcd2	100	78.068	ENSCANG00000035636	PTCD2	99	78.068	Colobus_angolensis_palliatus
ENSJJAG00000024388	Ptcd2	100	77.285	ENSCGRG00001015289	Ptcd2	84	77.285	Cricetulus_griseus_chok1gshd
ENSJJAG00000024388	Ptcd2	100	77.285	ENSCGRG00000006193	Ptcd2	84	77.285	Cricetulus_griseus_crigri
ENSJJAG00000024388	Ptcd2	91	46.132	ENSCVAG00000001285	ptcd2	89	46.132	Cyprinodon_variegatus
ENSJJAG00000024388	Ptcd2	93	46.218	ENSDARG00000035391	ptcd2	93	46.218	Danio_rerio
ENSJJAG00000024388	Ptcd2	100	74.674	ENSDNOG00000008719	PTCD2	100	74.674	Dasypus_novemcinctus
ENSJJAG00000024388	Ptcd2	100	75.969	ENSDORG00000004921	Ptcd2	100	75.969	Dipodomys_ordii
ENSJJAG00000024388	Ptcd2	100	66.406	ENSETEG00000016542	PTCD2	99	66.406	Echinops_telfairi
ENSJJAG00000024388	Ptcd2	100	78.329	ENSEASG00005018038	PTCD2	100	78.329	Equus_asinus_asinus
ENSJJAG00000024388	Ptcd2	100	78.068	ENSECAG00000007022	PTCD2	98	78.068	Equus_caballus
ENSJJAG00000024388	Ptcd2	100	69.452	ENSEEUG00000014031	PTCD2	99	69.452	Erinaceus_europaeus
ENSJJAG00000024388	Ptcd2	92	50.142	ENSELUG00000003584	ptcd2	91	50.142	Esox_lucius
ENSJJAG00000024388	Ptcd2	100	70.496	ENSFCAG00000045432	PTCD2	82	70.496	Felis_catus
ENSJJAG00000024388	Ptcd2	85	52.294	ENSFALG00000010299	PTCD2	99	52.294	Ficedula_albicollis
ENSJJAG00000024388	Ptcd2	100	74.413	ENSFDAG00000018461	PTCD2	100	74.413	Fukomys_damarensis
ENSJJAG00000024388	Ptcd2	91	49.292	ENSGMOG00000003637	ptcd2	91	49.292	Gadus_morhua
ENSJJAG00000024388	Ptcd2	92	51.977	ENSGALG00000038260	PTCD2	100	50.260	Gallus_gallus
ENSJJAG00000024388	Ptcd2	94	59.280	ENSGAGG00000021952	PTCD2	93	59.280	Gopherus_agassizii
ENSJJAG00000024388	Ptcd2	100	78.068	ENSGGOG00000010695	PTCD2	99	78.068	Gorilla_gorilla
ENSJJAG00000024388	Ptcd2	91	46.991	ENSHBUG00000009191	ptcd2	89	46.991	Haplochromis_burtoni
ENSJJAG00000024388	Ptcd2	100	74.935	ENSHGLG00000001234	PTCD2	100	74.935	Heterocephalus_glaber_female
ENSJJAG00000024388	Ptcd2	100	74.935	ENSHGLG00100015419	PTCD2	100	74.935	Heterocephalus_glaber_male
ENSJJAG00000024388	Ptcd2	91	47.851	ENSHCOG00000001703	ptcd2	90	47.851	Hippocampus_comes
ENSJJAG00000024388	Ptcd2	85	45.566	ENSIPUG00000006080	ptcd2	96	43.478	Ictalurus_punctatus
ENSJJAG00000024388	Ptcd2	99	80.366	ENSSTOG00000006596	PTCD2	99	80.366	Ictidomys_tridecemlineatus
ENSJJAG00000024388	Ptcd2	90	44.058	ENSKMAG00000009329	ptcd2	90	44.058	Kryptolebias_marmoratus
ENSJJAG00000024388	Ptcd2	94	47.222	ENSLBEG00000024871	ptcd2	91	47.222	Labrus_bergylta
ENSJJAG00000024388	Ptcd2	93	55.337	ENSLOCG00000011122	ptcd2	93	55.337	Lepisosteus_oculatus
ENSJJAG00000024388	Ptcd2	81	75.884	ENSLAFG00000004115	PTCD2	100	75.884	Loxodonta_africana
ENSJJAG00000024388	Ptcd2	100	77.285	ENSMFAG00000031516	PTCD2	99	77.285	Macaca_fascicularis
ENSJJAG00000024388	Ptcd2	100	77.546	ENSMNEG00000007537	PTCD2	100	77.546	Macaca_nemestrina
ENSJJAG00000024388	Ptcd2	100	77.546	ENSMLEG00000031093	PTCD2	99	77.546	Mandrillus_leucophaeus
ENSJJAG00000024388	Ptcd2	91	49.713	ENSMAMG00000018529	ptcd2	91	49.713	Mastacembelus_armatus
ENSJJAG00000024388	Ptcd2	91	46.991	ENSMZEG00005003625	ptcd2	89	46.991	Maylandia_zebra
ENSJJAG00000024388	Ptcd2	91	52.586	ENSMGAG00000005033	PTCD2	100	52.586	Meleagris_gallopavo
ENSJJAG00000024388	Ptcd2	100	59.530	ENSMAUG00000020253	Ptcd2	100	59.530	Mesocricetus_auratus
ENSJJAG00000024388	Ptcd2	100	75.979	ENSMICG00000004535	PTCD2	99	75.979	Microcebus_murinus
ENSJJAG00000024388	Ptcd2	100	76.501	ENSMOCG00000019985	Ptcd2	100	76.501	Microtus_ochrogaster
ENSJJAG00000024388	Ptcd2	100	58.333	ENSMODG00000001695	PTCD2	100	58.333	Monodelphis_domestica
ENSJJAG00000024388	Ptcd2	91	47.989	ENSMALG00000022372	ptcd2	91	47.989	Monopterus_albus
ENSJJAG00000024388	Ptcd2	100	73.629	MGP_CAROLIEiJ_G0018829	Ptcd2	100	73.629	Mus_caroli
ENSJJAG00000024388	Ptcd2	100	73.368	ENSMUSG00000021650	Ptcd2	100	73.368	Mus_musculus
ENSJJAG00000024388	Ptcd2	100	75.979	MGP_PahariEiJ_G0015904	Ptcd2	100	75.979	Mus_pahari
ENSJJAG00000024388	Ptcd2	100	73.890	MGP_SPRETEiJ_G0019711	Ptcd2	100	73.890	Mus_spretus
ENSJJAG00000024388	Ptcd2	100	76.762	ENSMPUG00000014401	PTCD2	100	76.762	Mustela_putorius_furo
ENSJJAG00000024388	Ptcd2	100	74.413	ENSMLUG00000007374	PTCD2	99	74.413	Myotis_lucifugus
ENSJJAG00000024388	Ptcd2	100	76.762	ENSNGAG00000005027	Ptcd2	100	76.762	Nannospalax_galili
ENSJJAG00000024388	Ptcd2	91	47.278	ENSNBRG00000008174	ptcd2	91	47.278	Neolamprologus_brichardi
ENSJJAG00000024388	Ptcd2	86	46.224	ENSNBRG00000000092	-	100	46.224	Neolamprologus_brichardi
ENSJJAG00000024388	Ptcd2	100	77.807	ENSNLEG00000004516	PTCD2	99	77.807	Nomascus_leucogenys
ENSJJAG00000024388	Ptcd2	100	46.373	ENSMEUG00000014012	-	99	46.373	Notamacropus_eugenii
ENSJJAG00000024388	Ptcd2	100	70.235	ENSOPRG00000007290	PTCD2	99	70.235	Ochotona_princeps
ENSJJAG00000024388	Ptcd2	100	75.457	ENSODEG00000016417	PTCD2	100	75.457	Octodon_degus
ENSJJAG00000024388	Ptcd2	78	46.465	ENSONIG00000011269	ptcd2	87	46.465	Oreochromis_niloticus
ENSJJAG00000024388	Ptcd2	93	76.536	ENSOCUG00000007970	PTCD2	100	74.151	Oryctolagus_cuniculus
ENSJJAG00000024388	Ptcd2	90	46.686	ENSORLG00000003851	ptcd2	88	46.686	Oryzias_latipes
ENSJJAG00000024388	Ptcd2	90	46.110	ENSORLG00020009823	ptcd2	90	46.110	Oryzias_latipes_hni
ENSJJAG00000024388	Ptcd2	90	45.821	ENSORLG00015016777	ptcd2	99	45.821	Oryzias_latipes_hsok
ENSJJAG00000024388	Ptcd2	94	44.598	ENSOMEG00000012396	ptcd2	86	44.598	Oryzias_melastigma
ENSJJAG00000024388	Ptcd2	100	71.802	ENSOGAG00000008390	PTCD2	99	71.802	Otolemur_garnettii
ENSJJAG00000024388	Ptcd2	100	77.865	ENSOARG00000005087	PTCD2	99	77.865	Ovis_aries
ENSJJAG00000024388	Ptcd2	100	78.068	ENSPPAG00000028480	PTCD2	99	78.068	Pan_paniscus
ENSJJAG00000024388	Ptcd2	100	77.546	ENSPTRG00000016968	PTCD2	99	77.546	Pan_troglodytes
ENSJJAG00000024388	Ptcd2	90	80.290	ENSPANG00000006611	PTCD2	89	80.290	Papio_anubis
ENSJJAG00000024388	Ptcd2	93	48.596	ENSPKIG00000019896	ptcd2	93	48.596	Paramormyrops_kingsleyae
ENSJJAG00000024388	Ptcd2	83	58.991	ENSPSIG00000014559	PTCD2	98	58.991	Pelodiscus_sinensis
ENSJJAG00000024388	Ptcd2	100	77.143	ENSPEMG00000000884	Ptcd2	100	77.143	Peromyscus_maniculatus_bairdii
ENSJJAG00000024388	Ptcd2	100	57.812	ENSPCIG00000029047	PTCD2	100	57.812	Phascolarctos_cinereus
ENSJJAG00000024388	Ptcd2	84	47.222	ENSPLAG00000010456	ptcd2	91	47.278	Poecilia_latipinna
ENSJJAG00000024388	Ptcd2	91	46.705	ENSPREG00000021797	ptcd2	88	46.705	Poecilia_reticulata
ENSJJAG00000024388	Ptcd2	100	68.407	ENSPPYG00000015543	PTCD2	99	68.407	Pongo_abelii
ENSJJAG00000024388	Ptcd2	81	63.430	ENSPCAG00000006806	PTCD2	98	63.430	Procavia_capensis
ENSJJAG00000024388	Ptcd2	100	74.935	ENSPVAG00000010935	PTCD2	99	74.935	Pteropus_vampyrus
ENSJJAG00000024388	Ptcd2	91	46.991	ENSPNYG00000003122	ptcd2	89	46.991	Pundamilia_nyererei
ENSJJAG00000024388	Ptcd2	93	48.324	ENSPNAG00000021490	ptcd2	93	48.324	Pygocentrus_nattereri
ENSJJAG00000024388	Ptcd2	100	77.285	ENSRNOG00000028403	Ptcd2	100	77.285	Rattus_norvegicus
ENSJJAG00000024388	Ptcd2	100	72.324	ENSRBIG00000032929	PTCD2	99	72.324	Rhinopithecus_bieti
ENSJJAG00000024388	Ptcd2	100	77.023	ENSRROG00000000080	PTCD2	100	77.023	Rhinopithecus_roxellana
ENSJJAG00000024388	Ptcd2	100	76.501	ENSSBOG00000018911	PTCD2	100	76.501	Saimiri_boliviensis_boliviensis
ENSJJAG00000024388	Ptcd2	93	60.615	ENSSHAG00000003833	PTCD2	93	60.615	Sarcophilus_harrisii
ENSJJAG00000024388	Ptcd2	95	46.575	ENSSFOG00015015415	ptcd2	94	46.575	Scleropages_formosus
ENSJJAG00000024388	Ptcd2	91	44.669	ENSSMAG00000010350	ptcd2	90	44.669	Scophthalmus_maximus
ENSJJAG00000024388	Ptcd2	91	48.703	ENSSDUG00000008142	ptcd2	87	48.703	Seriola_dumerili
ENSJJAG00000024388	Ptcd2	91	48.703	ENSSLDG00000015284	ptcd2	91	48.703	Seriola_lalandi_dorsalis
ENSJJAG00000024388	Ptcd2	81	66.343	ENSSARG00000004983	PTCD2	99	66.343	Sorex_araneus
ENSJJAG00000024388	Ptcd2	92	53.824	ENSSPUG00000000176	PTCD2	90	53.824	Sphenodon_punctatus
ENSJJAG00000024388	Ptcd2	91	45.977	ENSSPAG00000008591	ptcd2	89	45.977	Stegastes_partitus
ENSJJAG00000024388	Ptcd2	100	76.762	ENSSSCG00000016975	PTCD2	90	76.762	Sus_scrofa
ENSJJAG00000024388	Ptcd2	90	52.174	ENSTGUG00000005705	PTCD2	99	52.174	Taeniopygia_guttata
ENSJJAG00000024388	Ptcd2	100	73.368	ENSTBEG00000016559	PTCD2	99	73.368	Tupaia_belangeri
ENSJJAG00000024388	Ptcd2	100	77.083	ENSTTRG00000011851	PTCD2	99	77.083	Tursiops_truncatus
ENSJJAG00000024388	Ptcd2	100	74.674	ENSUAMG00000007583	PTCD2	90	74.674	Ursus_americanus
ENSJJAG00000024388	Ptcd2	100	74.413	ENSUMAG00000007666	PTCD2	100	74.413	Ursus_maritimus
ENSJJAG00000024388	Ptcd2	100	76.562	ENSVPAG00000009597	PTCD2	99	76.562	Vicugna_pacos
ENSJJAG00000024388	Ptcd2	100	74.151	ENSVVUG00000007299	-	100	74.151	Vulpes_vulpes
ENSJJAG00000024388	Ptcd2	94	53.315	ENSXETG00000031652	PTCD2	94	53.315	Xenopus_tropicalis
ENSJJAG00000024388	Ptcd2	84	47.222	ENSXMAG00000005940	ptcd2	82	46.991	Xiphophorus_maculatus