EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000000046 (Gene tree)
Gene ID: 108231793
Gene Symbol: polr1e
Alias: zgc:112501
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 5599 bases
Position: chrLWHD01000001.1:131424-137022
Accession: 108231793
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000000023	RNA_pol_I_A49	PF06870.12	3.1e-111	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000000047	-	2577	XM_017409083	ENSKMAP00000000023	416 (aa)	XP_017264572	UPI0007F9027E

Gene Model

Click here to download ENSKMAG00000000046's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000000046's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000000046	polr1e	99	41.007	ENSG00000137054	POLR1E	95	42.750	Homo_sapiens
ENSKMAG00000000046	polr1e	100	69.231	ENSAPOG00000012452	polr1e	100	69.231	Acanthochromis_polyacanthus
ENSKMAG00000000046	polr1e	99	38.829	ENSAMEG00000010193	POLR1E	95	38.829	Ailuropoda_melanoleuca
ENSKMAG00000000046	polr1e	100	67.943	ENSACIG00000009884	polr1e	99	72.265	Amphilophus_citrinellus
ENSKMAG00000000046	polr1e	100	75.481	ENSAOCG00000005665	polr1e	100	75.481	Amphiprion_ocellaris
ENSKMAG00000000046	polr1e	100	75.962	ENSAPEG00000020581	polr1e	100	75.962	Amphiprion_percula
ENSKMAG00000000046	polr1e	100	76.442	ENSATEG00000020609	polr1e	100	76.442	Anabas_testudineus
ENSKMAG00000000046	polr1e	81	39.740	ENSAPLG00000010340	POLR1E	100	39.740	Anas_platyrhynchos
ENSKMAG00000000046	polr1e	99	42.651	ENSANAG00000038046	POLR1E	98	42.651	Aotus_nancymaae
ENSKMAG00000000046	polr1e	100	76.683	ENSACLG00000013685	polr1e	99	76.683	Astatotilapia_calliptera
ENSKMAG00000000046	polr1e	99	56.386	ENSAMXG00000018181	polr1e	99	56.386	Astyanax_mexicanus
ENSKMAG00000000046	polr1e	99	43.373	ENSBTAG00000012243	POLR1E	98	43.373	Bos_taurus
ENSKMAG00000000046	polr1e	95	40.750	ENSCJAG00000010512	POLR1E	92	44.986	Callithrix_jacchus
ENSKMAG00000000046	polr1e	99	41.928	ENSCAFG00000002377	POLR1E	98	41.928	Canis_familiaris
ENSKMAG00000000046	polr1e	99	41.687	ENSCAFG00020017851	POLR1E	98	41.687	Canis_lupus_dingo
ENSKMAG00000000046	polr1e	99	43.301	ENSCHIG00000019479	POLR1E	98	43.301	Capra_hircus
ENSKMAG00000000046	polr1e	99	42.651	ENSTSYG00000002075	POLR1E	98	42.651	Carlito_syrichta
ENSKMAG00000000046	polr1e	70	39.731	ENSCAPG00000015653	POLR1E	99	39.731	Cavia_aperea
ENSKMAG00000000046	polr1e	99	42.043	ENSCPOG00000009965	POLR1E	98	42.043	Cavia_porcellus
ENSKMAG00000000046	polr1e	99	38.554	ENSCCAG00000029460	POLR1E	98	38.554	Cebus_capucinus
ENSKMAG00000000046	polr1e	95	43.500	ENSCATG00000031732	POLR1E	95	43.500	Cercocebus_atys
ENSKMAG00000000046	polr1e	87	45.028	ENSCLAG00000012701	POLR1E	95	45.028	Chinchilla_lanigera
ENSKMAG00000000046	polr1e	98	42.615	ENSCSAG00000010782	POLR1E	95	43.358	Chlorocebus_sabaeus
ENSKMAG00000000046	polr1e	95	36.020	ENSCHOG00000013024	POLR1E	82	36.020	Choloepus_hoffmanni
ENSKMAG00000000046	polr1e	99	41.667	ENSCPBG00000006923	POLR1E	99	41.667	Chrysemys_picta_bellii
ENSKMAG00000000046	polr1e	98	42.995	ENSCANG00000036112	POLR1E	95	43.750	Colobus_angolensis_palliatus
ENSKMAG00000000046	polr1e	99	40.964	ENSCGRG00001006197	Polr1e	95	40.964	Cricetulus_griseus_chok1gshd
ENSKMAG00000000046	polr1e	99	40.723	ENSCGRG00000006430	Polr1e	95	40.723	Cricetulus_griseus_crigri
ENSKMAG00000000046	polr1e	99	68.916	ENSCSEG00000005121	polr1e	99	68.916	Cynoglossus_semilaevis
ENSKMAG00000000046	polr1e	100	79.808	ENSCVAG00000019759	polr1e	100	79.808	Cyprinodon_variegatus
ENSKMAG00000000046	polr1e	96	57.855	ENSDARG00000006434	polr1e	100	57.212	Danio_rerio
ENSKMAG00000000046	polr1e	99	36.518	ENSDNOG00000010257	POLR1E	96	37.281	Dasypus_novemcinctus
ENSKMAG00000000046	polr1e	85	40.278	ENSETEG00000018204	POLR1E	99	40.278	Echinops_telfairi
ENSKMAG00000000046	polr1e	99	42.651	ENSEASG00005000675	POLR1E	98	42.651	Equus_asinus_asinus
ENSKMAG00000000046	polr1e	99	42.651	ENSECAG00000014669	POLR1E	98	42.651	Equus_caballus
ENSKMAG00000000046	polr1e	99	36.779	ENSEEUG00000011928	POLR1E	86	36.779	Erinaceus_europaeus
ENSKMAG00000000046	polr1e	99	67.952	ENSELUG00000008150	polr1e	99	67.952	Esox_lucius
ENSKMAG00000000046	polr1e	99	42.067	ENSFCAG00000013081	POLR1E	98	42.067	Felis_catus
ENSKMAG00000000046	polr1e	95	42.643	ENSFALG00000012950	POLR1E	99	42.643	Ficedula_albicollis
ENSKMAG00000000046	polr1e	99	43.645	ENSFDAG00000016917	POLR1E	98	43.645	Fukomys_damarensis
ENSKMAG00000000046	polr1e	100	78.177	ENSFHEG00000009801	polr1e	100	78.177	Fundulus_heteroclitus
ENSKMAG00000000046	polr1e	99	52.143	ENSGMOG00000003336	POLR1E	99	52.143	Gadus_morhua
ENSKMAG00000000046	polr1e	99	43.095	ENSGALG00000005395	POLR1E	99	43.095	Gallus_gallus
ENSKMAG00000000046	polr1e	100	78.125	ENSGAFG00000004850	polr1e	100	78.125	Gambusia_affinis
ENSKMAG00000000046	polr1e	100	69.928	ENSGACG00000016087	polr1e	100	69.928	Gasterosteus_aculeatus
ENSKMAG00000000046	polr1e	97	37.805	ENSGAGG00000001659	POLR1E	99	37.619	Gopherus_agassizii
ENSKMAG00000000046	polr1e	99	41.106	ENSGGOG00000001882	POLR1E	94	44.961	Gorilla_gorilla
ENSKMAG00000000046	polr1e	100	76.683	ENSHBUG00000002559	polr1e	99	76.683	Haplochromis_burtoni
ENSKMAG00000000046	polr1e	99	43.333	ENSHGLG00000002036	POLR1E	98	43.333	Heterocephalus_glaber_female
ENSKMAG00000000046	polr1e	99	43.571	ENSHGLG00100012784	POLR1E	98	43.571	Heterocephalus_glaber_male
ENSKMAG00000000046	polr1e	100	68.990	ENSHCOG00000002774	polr1e	100	68.990	Hippocampus_comes
ENSKMAG00000000046	polr1e	99	55.288	ENSIPUG00000003019	polr1e	99	55.288	Ictalurus_punctatus
ENSKMAG00000000046	polr1e	99	42.410	ENSSTOG00000009810	POLR1E	99	42.410	Ictidomys_tridecemlineatus
ENSKMAG00000000046	polr1e	98	42.718	ENSJJAG00000020731	Polr1e	94	42.718	Jaculus_jaculus
ENSKMAG00000000046	polr1e	99	74.699	ENSLBEG00000003104	polr1e	99	74.699	Labrus_bergylta
ENSKMAG00000000046	polr1e	86	50.000	ENSLACG00000003416	POLR1E	99	50.000	Latimeria_chalumnae
ENSKMAG00000000046	polr1e	99	52.038	ENSLOCG00000012859	polr1e	99	52.038	Lepisosteus_oculatus
ENSKMAG00000000046	polr1e	99	42.271	ENSLAFG00000012831	POLR1E	98	42.271	Loxodonta_africana
ENSKMAG00000000046	polr1e	98	42.754	ENSMFAG00000045465	POLR1E	93	44.444	Macaca_fascicularis
ENSKMAG00000000046	polr1e	95	43.500	ENSMMUG00000017892	POLR1E	95	43.500	Macaca_mulatta
ENSKMAG00000000046	polr1e	95	40.342	ENSMNEG00000040283	POLR1E	90	46.341	Macaca_nemestrina
ENSKMAG00000000046	polr1e	95	43.500	ENSMLEG00000031135	POLR1E	95	43.500	Mandrillus_leucophaeus
ENSKMAG00000000046	polr1e	99	75.904	ENSMAMG00000001260	polr1e	99	75.904	Mastacembelus_armatus
ENSKMAG00000000046	polr1e	100	76.683	ENSMZEG00005021536	polr1e	99	76.683	Maylandia_zebra
ENSKMAG00000000046	polr1e	99	41.546	ENSMAUG00000021044	Polr1e	95	41.546	Mesocricetus_auratus
ENSKMAG00000000046	polr1e	99	43.165	ENSMICG00000003673	POLR1E	98	43.165	Microcebus_murinus
ENSKMAG00000000046	polr1e	99	40.678	ENSMOCG00000012920	Polr1e	94	40.678	Microtus_ochrogaster
ENSKMAG00000000046	polr1e	100	75.300	ENSMMOG00000007391	polr1e	100	75.300	Mola_mola
ENSKMAG00000000046	polr1e	96	43.176	ENSMODG00000002884	POLR1E	98	43.176	Monodelphis_domestica
ENSKMAG00000000046	polr1e	100	76.202	ENSMALG00000002665	polr1e	99	76.202	Monopterus_albus
ENSKMAG00000000046	polr1e	99	40.723	MGP_CAROLIEiJ_G0025967	Polr1e	97	40.554	Mus_caroli
ENSKMAG00000000046	polr1e	99	41.587	ENSMUSG00000028318	Polr1e	97	41.457	Mus_musculus
ENSKMAG00000000046	polr1e	99	42.926	MGP_PahariEiJ_G0024114	Polr1e	97	42.857	Mus_pahari
ENSKMAG00000000046	polr1e	99	41.827	MGP_SPRETEiJ_G0026930	Polr1e	97	41.709	Mus_spretus
ENSKMAG00000000046	polr1e	99	38.280	ENSMPUG00000006040	POLR1E	98	36.481	Mustela_putorius_furo
ENSKMAG00000000046	polr1e	99	43.614	ENSMLUG00000012688	POLR1E	95	43.614	Myotis_lucifugus
ENSKMAG00000000046	polr1e	98	43.447	ENSNGAG00000002520	Polr1e	94	43.447	Nannospalax_galili
ENSKMAG00000000046	polr1e	100	77.163	ENSNBRG00000016822	polr1e	99	77.163	Neolamprologus_brichardi
ENSKMAG00000000046	polr1e	99	41.106	ENSNLEG00000003616	POLR1E	93	45.238	Nomascus_leucogenys
ENSKMAG00000000046	polr1e	74	47.556	ENSMEUG00000015372	-	59	47.556	Notamacropus_eugenii
ENSKMAG00000000046	polr1e	86	37.778	ENSOPRG00000014206	POLR1E	99	37.778	Ochotona_princeps
ENSKMAG00000000046	polr1e	98	44.010	ENSODEG00000014565	POLR1E	94	44.010	Octodon_degus
ENSKMAG00000000046	polr1e	100	76.683	ENSONIG00000008921	polr1e	99	76.683	Oreochromis_niloticus
ENSKMAG00000000046	polr1e	98	41.748	ENSOCUG00000024773	POLR1E	98	41.748	Oryctolagus_cuniculus
ENSKMAG00000000046	polr1e	100	73.558	ENSORLG00000005143	polr1e	100	73.558	Oryzias_latipes
ENSKMAG00000000046	polr1e	93	70.725	ENSORLG00020007271	polr1e	99	70.725	Oryzias_latipes_hni
ENSKMAG00000000046	polr1e	100	73.558	ENSORLG00015000137	polr1e	100	73.558	Oryzias_latipes_hsok
ENSKMAG00000000046	polr1e	100	72.356	ENSOMEG00000013264	polr1e	98	72.356	Oryzias_melastigma
ENSKMAG00000000046	polr1e	99	42.584	ENSOGAG00000012981	POLR1E	96	42.584	Otolemur_garnettii
ENSKMAG00000000046	polr1e	99	43.541	ENSOARG00000011465	POLR1E	95	43.541	Ovis_aries
ENSKMAG00000000046	polr1e	99	41.106	ENSPPAG00000034566	POLR1E	93	45.238	Pan_paniscus
ENSKMAG00000000046	polr1e	99	42.308	ENSPPRG00000005649	POLR1E	98	42.308	Panthera_pardus
ENSKMAG00000000046	polr1e	99	42.308	ENSPTIG00000009774	POLR1E	98	42.308	Panthera_tigris_altaica
ENSKMAG00000000046	polr1e	99	41.007	ENSPTRG00000020944	POLR1E	93	45.238	Pan_troglodytes
ENSKMAG00000000046	polr1e	95	43.500	ENSPANG00000025563	POLR1E	95	43.500	Papio_anubis
ENSKMAG00000000046	polr1e	99	59.382	ENSPKIG00000003562	polr1e	99	59.382	Paramormyrops_kingsleyae
ENSKMAG00000000046	polr1e	95	41.457	ENSPSIG00000003274	POLR1E	92	42.105	Pelodiscus_sinensis
ENSKMAG00000000046	polr1e	95	65.404	ENSPMGG00000024169	polr1e	96	65.404	Periophthalmus_magnuspinnatus
ENSKMAG00000000046	polr1e	99	41.687	ENSPEMG00000019151	-	95	41.687	Peromyscus_maniculatus_bairdii
ENSKMAG00000000046	polr1e	99	36.165	ENSPEMG00000022300	-	94	36.165	Peromyscus_maniculatus_bairdii
ENSKMAG00000000046	polr1e	99	44.153	ENSPCIG00000014798	POLR1E	99	44.153	Phascolarctos_cinereus
ENSKMAG00000000046	polr1e	100	74.830	ENSPFOG00000019627	polr1e	99	74.830	Poecilia_formosa
ENSKMAG00000000046	polr1e	100	79.808	ENSPLAG00000022679	polr1e	100	79.808	Poecilia_latipinna
ENSKMAG00000000046	polr1e	87	80.278	ENSPMEG00000022123	polr1e	93	80.278	Poecilia_mexicana
ENSKMAG00000000046	polr1e	100	78.125	ENSPREG00000009470	polr1e	100	78.125	Poecilia_reticulata
ENSKMAG00000000046	polr1e	95	43.500	ENSPPYG00000019061	POLR1E	94	43.500	Pongo_abelii
ENSKMAG00000000046	polr1e	52	38.009	ENSPCAG00000004891	POLR1E	72	38.009	Procavia_capensis
ENSKMAG00000000046	polr1e	98	42.961	ENSPCOG00000027448	POLR1E	98	42.961	Propithecus_coquereli
ENSKMAG00000000046	polr1e	96	41.542	ENSPVAG00000007940	POLR1E	84	41.542	Pteropus_vampyrus
ENSKMAG00000000046	polr1e	100	76.683	ENSPNYG00000001032	polr1e	99	76.683	Pundamilia_nyererei
ENSKMAG00000000046	polr1e	99	57.452	ENSPNAG00000006987	polr1e	99	57.452	Pygocentrus_nattereri
ENSKMAG00000000046	polr1e	99	41.205	ENSRNOG00000012664	Polr1e	95	41.205	Rattus_norvegicus
ENSKMAG00000000046	polr1e	99	41.827	ENSRBIG00000034214	POLR1E	95	44.142	Rhinopithecus_bieti
ENSKMAG00000000046	polr1e	95	43.500	ENSRROG00000031986	POLR1E	95	43.500	Rhinopithecus_roxellana
ENSKMAG00000000046	polr1e	98	42.233	ENSSBOG00000021415	POLR1E	94	43.073	Saimiri_boliviensis_boliviensis
ENSKMAG00000000046	polr1e	85	43.296	ENSSHAG00000016084	POLR1E	97	43.296	Sarcophilus_harrisii
ENSKMAG00000000046	polr1e	99	58.753	ENSSFOG00015002293	polr1e	99	58.753	Scleropages_formosus
ENSKMAG00000000046	polr1e	99	77.349	ENSSMAG00000011672	polr1e	93	77.349	Scophthalmus_maximus
ENSKMAG00000000046	polr1e	100	76.683	ENSSDUG00000022279	polr1e	99	76.683	Seriola_dumerili
ENSKMAG00000000046	polr1e	100	76.923	ENSSLDG00000024918	polr1e	99	76.923	Seriola_lalandi_dorsalis
ENSKMAG00000000046	polr1e	56	37.931	ENSSARG00000009810	-	58	37.931	Sorex_araneus
ENSKMAG00000000046	polr1e	100	43.095	ENSSPUG00000009499	POLR1E	100	43.095	Sphenodon_punctatus
ENSKMAG00000000046	polr1e	100	78.125	ENSSPAG00000021240	polr1e	100	78.125	Stegastes_partitus
ENSKMAG00000000046	polr1e	99	41.928	ENSSSCG00000005347	POLR1E	98	41.928	Sus_scrofa
ENSKMAG00000000046	polr1e	95	37.808	ENSTGUG00000007169	POLR1E	100	37.808	Taeniopygia_guttata
ENSKMAG00000000046	polr1e	99	69.378	ENSTRUG00000020779	polr1e	99	69.378	Takifugu_rubripes
ENSKMAG00000000046	polr1e	99	70.673	ENSTNIG00000017812	polr1e	99	70.673	Tetraodon_nigroviridis
ENSKMAG00000000046	polr1e	95	42.317	ENSTBEG00000013786	POLR1E	84	42.317	Tupaia_belangeri
ENSKMAG00000000046	polr1e	99	40.191	ENSTTRG00000008294	POLR1E	87	40.618	Tursiops_truncatus
ENSKMAG00000000046	polr1e	99	43.133	ENSUAMG00000012474	POLR1E	98	45.556	Ursus_americanus
ENSKMAG00000000046	polr1e	99	43.133	ENSUMAG00000011496	POLR1E	98	43.133	Ursus_maritimus
ENSKMAG00000000046	polr1e	81	40.936	ENSVPAG00000009048	POLR1E	81	40.936	Vicugna_pacos
ENSKMAG00000000046	polr1e	98	41.748	ENSVVUG00000019954	POLR1E	97	41.748	Vulpes_vulpes
ENSKMAG00000000046	polr1e	99	39.667	ENSXETG00000006533	polr1e	99	39.667	Xenopus_tropicalis
ENSKMAG00000000046	polr1e	100	73.798	ENSXCOG00000013706	polr1e	100	73.798	Xiphophorus_couchianus
ENSKMAG00000000046	polr1e	100	79.567	ENSXMAG00000012484	polr1e	100	79.567	Xiphophorus_maculatus