EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSKMAG00000000234 (Gene tree)
Gene ID
108248486
Gene Symbol
RPA1 (1 of many)
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A 70 kDa DNA-binding subunit-like
Gene Type
protein_coding
Species
Kryptolebias_marmoratus
Status
putative
Strand
Plus strand
Length
33868 bases
Position
chrLWHD01000347.1:76557-110424
Accession
108248486
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSKMAP00000000242tRNA_anti-codonPF01336.251.1e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSKMAT00000000266RPA1 (1 of many)-2013408XM_017437285ENSKMAP00000000242607 (aa)XP_017292774UPI0007F89321
Gene Model
Click here to download ENSKMAG00000000234's gene model file
Pathways
Pathway IDPathway NameSource
kmr03030DNA replicationKEGG
kmr03420Nucleotide excision repairKEGG
kmr03430Mismatch repairKEGG
kmr03440Homologous recombinationKEGG
kmr03460Fanconi anemia pathwayKEGG
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSKMAG00000000234RPA19959.375ENSKMAG00000005605rpa19959.375
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSKMAG00000000234RPA19978.439ENSAPOG00000019409RPA19878.439Acanthochromis_polyacanthus
ENSKMAG00000000234RPA19961.028ENSAPOG00000011658rpa19961.692Acanthochromis_polyacanthus
ENSKMAG00000000234RPA19655.648ENSAMEG00000007706RPA19655.648Ailuropoda_melanoleuca
ENSKMAG00000000234RPA19577.759ENSACIG00000012881RPA19977.759Amphilophus_citrinellus
ENSKMAG00000000234RPA19654.467ENSACIG00000007277rpa19954.467Amphilophus_citrinellus
ENSKMAG00000000234RPA19974.730ENSAOCG00000009003RPA19974.730Amphiprion_ocellaris
ENSKMAG00000000234RPA19961.526ENSAOCG00000023376rpa19961.526Amphiprion_ocellaris
ENSKMAG00000000234RPA19961.322ENSAPEG00000008634rpa19961.538Amphiprion_percula
ENSKMAG00000000234RPA19973.042ENSAPEG00000019132RPA19973.042Amphiprion_percula
ENSKMAG00000000234RPA19972.783ENSATEG00000006443RPA19973.089Anabas_testudineus
ENSKMAG00000000234RPA19560.522ENSATEG00000022024rpa19960.522Anabas_testudineus
ENSKMAG00000000234RPA19853.041ENSAPLG00000012442RPA19453.041Anas_platyrhynchos
ENSKMAG00000000234RPA19953.181ENSACAG00000014490RPA19953.485Anolis_carolinensis
ENSKMAG00000000234RPA19656.143ENSANAG00000023456RPA19856.143Aotus_nancymaae
ENSKMAG00000000234RPA19362.610ENSACLG00000006640rpa19962.610Astatotilapia_calliptera
ENSKMAG00000000234RPA110075.195ENSACLG00000005223RPA110075.039Astatotilapia_calliptera
ENSKMAG00000000234RPA19961.221ENSAMXG00000008418rpa19961.375Astyanax_mexicanus
ENSKMAG00000000234RPA19954.723ENSBTAG00000009711RPA19954.723Bos_taurus
ENSKMAG00000000234RPA17130.435WBGene00017546rpa-16530.435Caenorhabditis_elegans
ENSKMAG00000000234RPA19954.120ENSCJAG00000001848RPA19954.677Callithrix_jacchus
ENSKMAG00000000234RPA19954.281ENSCAFG00000019249RPA19954.443Canis_familiaris
ENSKMAG00000000234RPA19954.281ENSCAFG00020009847RPA19954.443Canis_lupus_dingo
ENSKMAG00000000234RPA19954.397ENSCHIG00000026308RPA19954.397Capra_hircus
ENSKMAG00000000234RPA19954.927ENSTSYG00000003482-9954.927Carlito_syrichta
ENSKMAG00000000234RPA19954.634ENSCPOG00000000035RPA19954.634Cavia_porcellus
ENSKMAG00000000234RPA19061.458ENSCCAG00000010981RPA19961.458Cebus_capucinus
ENSKMAG00000000234RPA19954.943ENSCLAG00000005185-9954.943Chinchilla_lanigera
ENSKMAG00000000234RPA19951.452ENSCLAG00000015045-9951.452Chinchilla_lanigera
ENSKMAG00000000234RPA19060.417ENSCSAG00000013833RPA19960.417Chlorocebus_sabaeus
ENSKMAG00000000234RPA17162.356ENSCHOG00000009454-9962.356Choloepus_hoffmanni
ENSKMAG00000000234RPA19554.975ENSCHOG00000013540-9954.975Choloepus_hoffmanni
ENSKMAG00000000234RPA19954.647ENSCPBG00000020377RPA19956.055Chrysemys_picta_bellii
ENSKMAG00000000234RPA19943.186ENSCING00000023482-9943.186Ciona_intestinalis
ENSKMAG00000000234RPA19656.655ENSCANG00000030911RPA19856.655Colobus_angolensis_palliatus
ENSKMAG00000000234RPA19955.250ENSCGRG00001008197Rpa19955.250Cricetulus_griseus_chok1gshd
ENSKMAG00000000234RPA18157.201ENSCGRG00000000582Rpa19557.201Cricetulus_griseus_crigri
ENSKMAG00000000234RPA19963.249ENSCSEG00000012726RPA19965.195Cynoglossus_semilaevis
ENSKMAG00000000234RPA19959.113ENSCSEG00000013066rpa19959.113Cynoglossus_semilaevis
ENSKMAG00000000234RPA19671.252ENSCVAG00000013446-9671.252Cyprinodon_variegatus
ENSKMAG00000000234RPA19960.000ENSCVAG00000019431rpa19961.744Cyprinodon_variegatus
ENSKMAG00000000234RPA19961.678ENSDARG00000003938rpa19961.678Danio_rerio
ENSKMAG00000000234RPA19655.611ENSDNOG00000017218RPA19655.611Dasypus_novemcinctus
ENSKMAG00000000234RPA19955.574ENSDORG00000006199Rpa19955.574Dipodomys_ordii
ENSKMAG00000000234RPA19939.478FBgn0010173RpA-709840.230Drosophila_melanogaster
ENSKMAG00000000234RPA18363.918ENSETEG00000017608RPA18263.918Echinops_telfairi
ENSKMAG00000000234RPA19656.485ENSEASG00005009372RPA19956.672Equus_asinus_asinus
ENSKMAG00000000234RPA19955.233ENSECAG00000023886RPA19955.233Equus_caballus
ENSKMAG00000000234RPA16962.201ENSEEUG00000002186-6862.201Erinaceus_europaeus
ENSKMAG00000000234RPA18862.384ENSELUG00000006136RPA19962.384Esox_lucius
ENSKMAG00000000234RPA19960.784ENSELUG00000021071rpa19960.784Esox_lucius
ENSKMAG00000000234RPA19955.000ENSFCAG00000006306RPA19955.000Felis_catus
ENSKMAG00000000234RPA110053.796ENSFALG00000006575RPA19953.796Ficedula_albicollis
ENSKMAG00000000234RPA110054.693ENSFDAG00000007720RPA110054.693Fukomys_damarensis
ENSKMAG00000000234RPA19960.131ENSFHEG00000003580rpa19960.131Fundulus_heteroclitus
ENSKMAG00000000234RPA19958.472ENSGMOG00000010382rpa19958.472Gadus_morhua
ENSKMAG00000000234RPA110054.295ENSGALG00000003072RPA19954.295Gallus_gallus
ENSKMAG00000000234RPA19959.901ENSGAFG00000012916rpa19959.901Gambusia_affinis
ENSKMAG00000000234RPA110073.252ENSGAFG00000020953RPA110073.252Gambusia_affinis
ENSKMAG00000000234RPA19959.901ENSGACG00000010856rpa19959.901Gasterosteus_aculeatus
ENSKMAG00000000234RPA19954.647ENSGAGG00000013611RPA19954.647Gopherus_agassizii
ENSKMAG00000000234RPA19955.665ENSGGOG00000014186RPA19955.665Gorilla_gorilla
ENSKMAG00000000234RPA19666.267ENSHBUG00000009348RPA19966.267Haplochromis_burtoni
ENSKMAG00000000234RPA19961.120ENSHBUG00000017773rpa19961.120Haplochromis_burtoni
ENSKMAG00000000234RPA19954.006ENSHGLG00000008846RPA110054.750Heterocephalus_glaber_female
ENSKMAG00000000234RPA19954.006ENSHGLG00100017755-10054.750Heterocephalus_glaber_male
ENSKMAG00000000234RPA19951.050ENSHGLG00100000799-9951.050Heterocephalus_glaber_male
ENSKMAG00000000234RPA19945.907ENSHGLG00100002005-9946.613Heterocephalus_glaber_male
ENSKMAG00000000234RPA19956.863ENSHCOG00000001401rpa19957.236Hippocampus_comes
ENSKMAG00000000234RPA19949.592ENSHCOG00000000351RPA19949.592Hippocampus_comes
ENSKMAG00000000234RPA19961.741ENSIPUG00000004400rpa19961.741Ictalurus_punctatus
ENSKMAG00000000234RPA19753.808ENSSTOG00000022475RPA19953.808Ictidomys_tridecemlineatus
ENSKMAG00000000234RPA19556.176ENSJJAG00000000876Rpa19856.176Jaculus_jaculus
ENSKMAG00000000234RPA19975.556ENSLBEG00000002281RPA19675.556Labrus_bergylta
ENSKMAG00000000234RPA19959.247ENSLBEG00000021604rpa19959.247Labrus_bergylta
ENSKMAG00000000234RPA18055.918ENSLACG00000007210RPA19755.918Latimeria_chalumnae
ENSKMAG00000000234RPA19960.427ENSLOCG00000006397rpa19960.591Lepisosteus_oculatus
ENSKMAG00000000234RPA19953.333ENSLAFG00000015354RPA19953.333Loxodonta_africana
ENSKMAG00000000234RPA18052.703ENSMFAG00000036138-9854.819Macaca_fascicularis
ENSKMAG00000000234RPA19950.980ENSMMUG00000002442-9950.980Macaca_mulatta
ENSKMAG00000000234RPA19653.821ENSMMUG00000011604-9855.630Macaca_mulatta
ENSKMAG00000000234RPA19653.431ENSMNEG00000031632-9855.236Macaca_nemestrina
ENSKMAG00000000234RPA19948.282ENSMNEG00000029837-9948.282Macaca_nemestrina
ENSKMAG00000000234RPA19650.162ENSMLEG00000038768-9851.933Mandrillus_leucophaeus
ENSKMAG00000000234RPA19959.768ENSMAMG00000017993rpa19960.315Mastacembelus_armatus
ENSKMAG00000000234RPA19970.728ENSMAMG00000020097RPA19970.728Mastacembelus_armatus
ENSKMAG00000000234RPA19961.120ENSMZEG00005007551rpa19961.120Maylandia_zebra
ENSKMAG00000000234RPA110075.195ENSMZEG00005024731RPA110075.039Maylandia_zebra
ENSKMAG00000000234RPA19954.262ENSMGAG00000005315RPA19854.262Meleagris_gallopavo
ENSKMAG00000000234RPA19656.007ENSMAUG00000010474Rpa19856.007Mesocricetus_auratus
ENSKMAG00000000234RPA19954.120ENSMICG00000012867RPA19954.443Microcebus_murinus
ENSKMAG00000000234RPA19955.049ENSMOCG00000013019Rpa19955.049Microtus_ochrogaster
ENSKMAG00000000234RPA19662.457ENSMMOG00000014292rpa19962.457Mola_mola
ENSKMAG00000000234RPA19874.376ENSMMOG00000010868RPA19874.376Mola_mola
ENSKMAG00000000234RPA19955.178ENSMODG00000010549RPA19955.178Monodelphis_domestica
ENSKMAG00000000234RPA19960.500ENSMALG00000011453rpa19960.500Monopterus_albus
ENSKMAG00000000234RPA19976.228ENSMALG00000001208RPA19676.228Monopterus_albus
ENSKMAG00000000234RPA19955.340MGP_CAROLIEiJ_G0016734Rpa19955.285Mus_caroli
ENSKMAG00000000234RPA19954.808ENSMUSG00000000751Rpa19954.750Mus_musculus
ENSKMAG00000000234RPA19955.233MGP_PahariEiJ_G0017871Rpa19955.178Mus_pahari
ENSKMAG00000000234RPA19954.720MGP_SPRETEiJ_G0017577Rpa19954.662Mus_spretus
ENSKMAG00000000234RPA19954.327ENSMPUG00000013119RPA19954.327Mustela_putorius_furo
ENSKMAG00000000234RPA19656.040ENSMLUG00000006113RPA19556.040Myotis_lucifugus
ENSKMAG00000000234RPA19555.444ENSNGAG00000004522Rpa19455.444Nannospalax_galili
ENSKMAG00000000234RPA19971.429ENSNBRG00000009672RPA19771.429Neolamprologus_brichardi
ENSKMAG00000000234RPA19461.888ENSNBRG00000020595rpa19961.888Neolamprologus_brichardi
ENSKMAG00000000234RPA19954.080ENSNLEG00000017149RPA19954.911Nomascus_leucogenys
ENSKMAG00000000234RPA19648.333ENSMEUG00000006714RPA19748.333Notamacropus_eugenii
ENSKMAG00000000234RPA19654.983ENSODEG00000009038RPA19654.983Octodon_degus
ENSKMAG00000000234RPA19960.196ENSONIG00000013135rpa19960.196Oreochromis_niloticus
ENSKMAG00000000234RPA19656.544ENSOANG00000010880RPA19856.711Ornithorhynchus_anatinus
ENSKMAG00000000234RPA19952.941ENSOCUG00000001504RPA19952.941Oryctolagus_cuniculus
ENSKMAG00000000234RPA19971.603ENSORLG00000003368RPA19971.450Oryzias_latipes
ENSKMAG00000000234RPA19961.462ENSORLG00000004856rpa19961.462Oryzias_latipes
ENSKMAG00000000234RPA19961.462ENSORLG00020008980rpa19961.462Oryzias_latipes_hni
ENSKMAG00000000234RPA19970.165ENSORLG00020015284RPA19969.865Oryzias_latipes_hni
ENSKMAG00000000234RPA16882.423ENSORLG00015005867-9682.423Oryzias_latipes_hsok
ENSKMAG00000000234RPA19961.462ENSORLG00015013982rpa19961.462Oryzias_latipes_hsok
ENSKMAG00000000234RPA19972.628ENSORLG00015020383RPA19972.628Oryzias_latipes_hsok
ENSKMAG00000000234RPA19960.000ENSOMEG00000004704rpa19960.000Oryzias_melastigma
ENSKMAG00000000234RPA19673.510ENSOMEG00000011040RPA19974.868Oryzias_melastigma
ENSKMAG00000000234RPA17563.483ENSOGAG00000029379-9863.483Otolemur_garnettii
ENSKMAG00000000234RPA19955.250ENSOGAG00000005581-9955.250Otolemur_garnettii
ENSKMAG00000000234RPA19954.397ENSOARG00000014479RPA19954.397Ovis_aries
ENSKMAG00000000234RPA19954.808ENSPPAG00000039680RPA19955.466Pan_paniscus
ENSKMAG00000000234RPA19955.323ENSPPRG00000011807RPA19955.323Panthera_pardus
ENSKMAG00000000234RPA19955.323ENSPTIG00000007898RPA19955.323Panthera_tigris_altaica
ENSKMAG00000000234RPA19955.484ENSPTRG00000008539RPA19955.395Pan_troglodytes
ENSKMAG00000000234RPA19952.978ENSPANG00000024592RPA19954.693Papio_anubis
ENSKMAG00000000234RPA19562.045ENSPKIG00000008053rpa19462.414Paramormyrops_kingsleyae
ENSKMAG00000000234RPA19756.219ENSPSIG00000015617RPA19956.219Pelodiscus_sinensis
ENSKMAG00000000234RPA19967.480ENSPMGG00000000543RPA19971.658Periophthalmus_magnuspinnatus
ENSKMAG00000000234RPA19662.069ENSPMGG00000011589rpa19862.069Periophthalmus_magnuspinnatus
ENSKMAG00000000234RPA19954.902ENSPEMG00000021061Rpa19954.902Peromyscus_maniculatus_bairdii
ENSKMAG00000000234RPA19954.080ENSPCIG00000019049RPA19955.250Phascolarctos_cinereus
ENSKMAG00000000234RPA19960.496ENSPFOG00000003987rpa19960.496Poecilia_formosa
ENSKMAG00000000234RPA19960.231ENSPLAG00000004984rpa19960.231Poecilia_latipinna
ENSKMAG00000000234RPA19573.226ENSPLAG00000008844-9773.226Poecilia_latipinna
ENSKMAG00000000234RPA19572.742ENSPMEG00000003627-9772.903Poecilia_mexicana
ENSKMAG00000000234RPA19960.496ENSPMEG00000020602rpa19961.032Poecilia_mexicana
ENSKMAG00000000234RPA110070.414ENSPREG00000010119RPA110069.630Poecilia_reticulata
ENSKMAG00000000234RPA19754.576ENSPREG00000010174rpa19954.576Poecilia_reticulata
ENSKMAG00000000234RPA19953.409ENSPCOG00000001799RPA19953.409Propithecus_coquereli
ENSKMAG00000000234RPA19955.250ENSPVAG00000002149RPA19955.250Pteropus_vampyrus
ENSKMAG00000000234RPA19961.120ENSPNYG00000016316rpa19962.566Pundamilia_nyererei
ENSKMAG00000000234RPA110075.351ENSPNYG00000024165RPA110075.195Pundamilia_nyererei
ENSKMAG00000000234RPA19954.758ENSPNAG00000008599rpa19656.272Pygocentrus_nattereri
ENSKMAG00000000234RPA19955.105ENSRNOG00000003123Rpa19955.375Rattus_norvegicus
ENSKMAG00000000234RPA19954.369ENSRBIG00000036587RPA19954.369Rhinopithecus_bieti
ENSKMAG00000000234RPA19951.294ENSRROG00000043278RPA19951.294Rhinopithecus_roxellana
ENSKMAG00000000234RPA19630.556YAR007CRFA19530.556Saccharomyces_cerevisiae
ENSKMAG00000000234RPA19156.383ENSSBOG00000030233RPA19756.991Saimiri_boliviensis_boliviensis
ENSKMAG00000000234RPA19855.340ENSSHAG00000007969RPA19856.230Sarcophilus_harrisii
ENSKMAG00000000234RPA19962.336ENSSFOG00015005362rpa19262.336Scleropages_formosus
ENSKMAG00000000234RPA19970.000ENSSMAG00000019746RPA19969.848Scophthalmus_maximus
ENSKMAG00000000234RPA19971.176ENSSDUG00000016358RPA19979.555Seriola_dumerili
ENSKMAG00000000234RPA19960.826ENSSDUG00000011949rpa19960.826Seriola_dumerili
ENSKMAG00000000234RPA19960.826ENSSLDG00000011806rpa19960.826Seriola_lalandi_dorsalis
ENSKMAG00000000234RPA19978.629ENSSLDG00000020784RPA19979.032Seriola_lalandi_dorsalis
ENSKMAG00000000234RPA19645.652ENSSARG00000007506RPA19845.652Sorex_araneus
ENSKMAG00000000234RPA19653.794ENSSPUG00000007223RPA19853.794Sphenodon_punctatus
ENSKMAG00000000234RPA19874.503ENSSPAG00000011165RPA19874.503Stegastes_partitus
ENSKMAG00000000234RPA19959.437ENSSPAG00000009903rpa19959.437Stegastes_partitus
ENSKMAG00000000234RPA19956.322ENSSSCG00000017822RPA19857.550Sus_scrofa
ENSKMAG00000000234RPA110054.106ENSTGUG00000005775RPA19954.106Taeniopygia_guttata
ENSKMAG00000000234RPA19975.538ENSTRUG00000000405RPA19975.734Takifugu_rubripes
ENSKMAG00000000234RPA19960.697ENSTRUG00000003616rpa19960.697Takifugu_rubripes
ENSKMAG00000000234RPA19960.261ENSTNIG00000016199rpa19960.362Tetraodon_nigroviridis
ENSKMAG00000000234RPA17163.741ENSTBEG00000002709RPA17263.741Tupaia_belangeri
ENSKMAG00000000234RPA19954.093ENSTTRG00000001169RPA19955.375Tursiops_truncatus
ENSKMAG00000000234RPA18675.000ENSUAMG00000015676RPA19575.000Ursus_americanus
ENSKMAG00000000234RPA19955.665ENSUMAG00000009328RPA19955.665Ursus_maritimus
ENSKMAG00000000234RPA19954.173ENSVPAG00000009443RPA19954.173Vicugna_pacos
ENSKMAG00000000234RPA19954.959ENSVVUG00000021715RPA19955.122Vulpes_vulpes
ENSKMAG00000000234RPA19956.774ENSXETG00000013538rpa19957.119Xenopus_tropicalis
ENSKMAG00000000234RPA19573.935ENSXCOG00000009899-10073.935Xiphophorus_couchianus
ENSKMAG00000000234RPA19359.717ENSXCOG00000010068rpa19460.219Xiphophorus_couchianus
ENSKMAG00000000234RPA19959.442ENSXMAG00000004102rpa19960.387Xiphophorus_maculatus
ENSKMAG00000000234RPA110079.226ENSXMAG00000010333RPA19579.226Xiphophorus_maculatus

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