EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSKMAG00000000234 (Gene tree)
Gene ID
108248486
Gene Symbol
RPA1 (1 of many)
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A 70 kDa DNA-binding subunit-like
Gene Type
protein_coding
Species
Kryptolebias_marmoratus
Status
putative
Strand
Plus strand
Length
33868 bases
Position
chrLWHD01000347.1:76557-110424
Accession
108248486
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSKMAP00000000242tRNA_anti-codonPF01336.251.1e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSKMAT00000000266RPA1 (1 of many)-2013408XM_017437285ENSKMAP00000000242607 (aa)XP_017292774UPI0007F89321
Gene Model
Click here to download ENSKMAG00000000234's gene model file
Pathways
Pathway IDPathway NameSource
kmr03030DNA replicationKEGG
kmr03420Nucleotide excision repairKEGG
kmr03430Mismatch repairKEGG
kmr03440Homologous recombinationKEGG
kmr03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000000234's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSKMAG00000000234RPA19959.375ENSKMAG00000005605rpa19959.375
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSKMAG00000000234RPA19978.439ENSAPOG00000019409RPA19878.439Acanthochromis_polyacanthus
ENSKMAG00000000234RPA19961.028ENSAPOG00000011658rpa19961.692Acanthochromis_polyacanthus
ENSKMAG00000000234RPA19655.648ENSAMEG00000007706RPA19655.648Ailuropoda_melanoleuca
ENSKMAG00000000234RPA19577.759ENSACIG00000012881RPA19977.759Amphilophus_citrinellus
ENSKMAG00000000234RPA19654.467ENSACIG00000007277rpa19954.467Amphilophus_citrinellus
ENSKMAG00000000234RPA19974.730ENSAOCG00000009003RPA19974.730Amphiprion_ocellaris
ENSKMAG00000000234RPA19961.526ENSAOCG00000023376rpa19961.526Amphiprion_ocellaris
ENSKMAG00000000234RPA19961.322ENSAPEG00000008634rpa19961.538Amphiprion_percula
ENSKMAG00000000234RPA19973.042ENSAPEG00000019132RPA19973.042Amphiprion_percula
ENSKMAG00000000234RPA19972.783ENSATEG00000006443RPA19973.089Anabas_testudineus
ENSKMAG00000000234RPA19560.522ENSATEG00000022024rpa19960.522Anabas_testudineus
ENSKMAG00000000234RPA19853.041ENSAPLG00000012442RPA19453.041Anas_platyrhynchos
ENSKMAG00000000234RPA19953.181ENSACAG00000014490RPA19953.485Anolis_carolinensis
ENSKMAG00000000234RPA19656.143ENSANAG00000023456RPA19856.143Aotus_nancymaae
ENSKMAG00000000234RPA19362.610ENSACLG00000006640rpa19962.610Astatotilapia_calliptera
ENSKMAG00000000234RPA110075.195ENSACLG00000005223RPA110075.039Astatotilapia_calliptera
ENSKMAG00000000234RPA19961.221ENSAMXG00000008418rpa19961.375Astyanax_mexicanus
ENSKMAG00000000234RPA19954.723ENSBTAG00000009711RPA19954.723Bos_taurus
ENSKMAG00000000234RPA17130.435WBGene00017546rpa-16530.435Caenorhabditis_elegans
ENSKMAG00000000234RPA19954.120ENSCJAG00000001848RPA19954.677Callithrix_jacchus
ENSKMAG00000000234RPA19954.281ENSCAFG00000019249RPA19954.443Canis_familiaris
ENSKMAG00000000234RPA19954.281ENSCAFG00020009847RPA19954.443Canis_lupus_dingo
ENSKMAG00000000234RPA19954.397ENSCHIG00000026308RPA19954.397Capra_hircus
ENSKMAG00000000234RPA19954.927ENSTSYG00000003482-9954.927Carlito_syrichta
ENSKMAG00000000234RPA19954.634ENSCPOG00000000035RPA19954.634Cavia_porcellus
ENSKMAG00000000234RPA19061.458ENSCCAG00000010981RPA19961.458Cebus_capucinus
ENSKMAG00000000234RPA19954.943ENSCLAG00000005185-9954.943Chinchilla_lanigera
ENSKMAG00000000234RPA19951.452ENSCLAG00000015045-9951.452Chinchilla_lanigera
ENSKMAG00000000234RPA19060.417ENSCSAG00000013833RPA19960.417Chlorocebus_sabaeus
ENSKMAG00000000234RPA17162.356ENSCHOG00000009454-9962.356Choloepus_hoffmanni
ENSKMAG00000000234RPA19554.975ENSCHOG00000013540-9954.975Choloepus_hoffmanni
ENSKMAG00000000234RPA19954.647ENSCPBG00000020377RPA19956.055Chrysemys_picta_bellii
ENSKMAG00000000234RPA19943.186ENSCING00000023482-9943.186Ciona_intestinalis
ENSKMAG00000000234RPA19656.655ENSCANG00000030911RPA19856.655Colobus_angolensis_palliatus
ENSKMAG00000000234RPA19955.250ENSCGRG00001008197Rpa19955.250Cricetulus_griseus_chok1gshd
ENSKMAG00000000234RPA18157.201ENSCGRG00000000582Rpa19557.201Cricetulus_griseus_crigri
ENSKMAG00000000234RPA19963.249ENSCSEG00000012726RPA19965.195Cynoglossus_semilaevis
ENSKMAG00000000234RPA19959.113ENSCSEG00000013066rpa19959.113Cynoglossus_semilaevis
ENSKMAG00000000234RPA19671.252ENSCVAG00000013446-9671.252Cyprinodon_variegatus
ENSKMAG00000000234RPA19960.000ENSCVAG00000019431rpa19961.744Cyprinodon_variegatus
ENSKMAG00000000234RPA19961.678ENSDARG00000003938rpa19961.678Danio_rerio
ENSKMAG00000000234RPA19655.611ENSDNOG00000017218RPA19655.611Dasypus_novemcinctus
ENSKMAG00000000234RPA19955.574ENSDORG00000006199Rpa19955.574Dipodomys_ordii
ENSKMAG00000000234RPA19939.478FBgn0010173RpA-709840.230Drosophila_melanogaster
ENSKMAG00000000234RPA18363.918ENSETEG00000017608RPA18263.918Echinops_telfairi
ENSKMAG00000000234RPA19656.485ENSEASG00005009372RPA19956.672Equus_asinus_asinus
ENSKMAG00000000234RPA19955.233ENSECAG00000023886RPA19955.233Equus_caballus
ENSKMAG00000000234RPA16962.201ENSEEUG00000002186-6862.201Erinaceus_europaeus
ENSKMAG00000000234RPA18862.384ENSELUG00000006136RPA19962.384Esox_lucius
ENSKMAG00000000234RPA19960.784ENSELUG00000021071rpa19960.784Esox_lucius
ENSKMAG00000000234RPA19955.000ENSFCAG00000006306RPA19955.000Felis_catus
ENSKMAG00000000234RPA110053.796ENSFALG00000006575RPA19953.796Ficedula_albicollis
ENSKMAG00000000234RPA110054.693ENSFDAG00000007720RPA110054.693Fukomys_damarensis
ENSKMAG00000000234RPA19960.131ENSFHEG00000003580rpa19960.131Fundulus_heteroclitus
ENSKMAG00000000234RPA19958.472ENSGMOG00000010382rpa19958.472Gadus_morhua
ENSKMAG00000000234RPA110054.295ENSGALG00000003072RPA19954.295Gallus_gallus
ENSKMAG00000000234RPA19959.901ENSGAFG00000012916rpa19959.901Gambusia_affinis
ENSKMAG00000000234RPA110073.252ENSGAFG00000020953RPA110073.252Gambusia_affinis
ENSKMAG00000000234RPA19959.901ENSGACG00000010856rpa19959.901Gasterosteus_aculeatus
ENSKMAG00000000234RPA19954.647ENSGAGG00000013611RPA19954.647Gopherus_agassizii
ENSKMAG00000000234RPA19955.665ENSGGOG00000014186RPA19955.665Gorilla_gorilla
ENSKMAG00000000234RPA19666.267ENSHBUG00000009348RPA19966.267Haplochromis_burtoni
ENSKMAG00000000234RPA19961.120ENSHBUG00000017773rpa19961.120Haplochromis_burtoni
ENSKMAG00000000234RPA19954.006ENSHGLG00000008846RPA110054.750Heterocephalus_glaber_female
ENSKMAG00000000234RPA19954.006ENSHGLG00100017755-10054.750Heterocephalus_glaber_male
ENSKMAG00000000234RPA19951.050ENSHGLG00100000799-9951.050Heterocephalus_glaber_male
ENSKMAG00000000234RPA19945.907ENSHGLG00100002005-9946.613Heterocephalus_glaber_male
ENSKMAG00000000234RPA19956.863ENSHCOG00000001401rpa19957.236Hippocampus_comes
ENSKMAG00000000234RPA19949.592ENSHCOG00000000351RPA19949.592Hippocampus_comes
ENSKMAG00000000234RPA19961.741ENSIPUG00000004400rpa19961.741Ictalurus_punctatus
ENSKMAG00000000234RPA19753.808ENSSTOG00000022475RPA19953.808Ictidomys_tridecemlineatus
ENSKMAG00000000234RPA19556.176ENSJJAG00000000876Rpa19856.176Jaculus_jaculus
ENSKMAG00000000234RPA19975.556ENSLBEG00000002281RPA19675.556Labrus_bergylta
ENSKMAG00000000234RPA19959.247ENSLBEG00000021604rpa19959.247Labrus_bergylta
ENSKMAG00000000234RPA18055.918ENSLACG00000007210RPA19755.918Latimeria_chalumnae
ENSKMAG00000000234RPA19960.427ENSLOCG00000006397rpa19960.591Lepisosteus_oculatus
ENSKMAG00000000234RPA19953.333ENSLAFG00000015354RPA19953.333Loxodonta_africana
ENSKMAG00000000234RPA18052.703ENSMFAG00000036138-9854.819Macaca_fascicularis
ENSKMAG00000000234RPA19950.980ENSMMUG00000002442-9950.980Macaca_mulatta
ENSKMAG00000000234RPA19653.821ENSMMUG00000011604-9855.630Macaca_mulatta
ENSKMAG00000000234RPA19653.431ENSMNEG00000031632-9855.236Macaca_nemestrina
ENSKMAG00000000234RPA19948.282ENSMNEG00000029837-9948.282Macaca_nemestrina
ENSKMAG00000000234RPA19650.162ENSMLEG00000038768-9851.933Mandrillus_leucophaeus
ENSKMAG00000000234RPA19959.768ENSMAMG00000017993rpa19960.315Mastacembelus_armatus
ENSKMAG00000000234RPA19970.728ENSMAMG00000020097RPA19970.728Mastacembelus_armatus
ENSKMAG00000000234RPA19961.120ENSMZEG00005007551rpa19961.120Maylandia_zebra
ENSKMAG00000000234RPA110075.195ENSMZEG00005024731RPA110075.039Maylandia_zebra
ENSKMAG00000000234RPA19954.262ENSMGAG00000005315RPA19854.262Meleagris_gallopavo
ENSKMAG00000000234RPA19656.007ENSMAUG00000010474Rpa19856.007Mesocricetus_auratus
ENSKMAG00000000234RPA19954.120ENSMICG00000012867RPA19954.443Microcebus_murinus
ENSKMAG00000000234RPA19955.049ENSMOCG00000013019Rpa19955.049Microtus_ochrogaster
ENSKMAG00000000234RPA19662.457ENSMMOG00000014292rpa19962.457Mola_mola
ENSKMAG00000000234RPA19874.376ENSMMOG00000010868RPA19874.376Mola_mola
ENSKMAG00000000234RPA19955.178ENSMODG00000010549RPA19955.178Monodelphis_domestica
ENSKMAG00000000234RPA19960.500ENSMALG00000011453rpa19960.500Monopterus_albus
ENSKMAG00000000234RPA19976.228ENSMALG00000001208RPA19676.228Monopterus_albus
ENSKMAG00000000234RPA19955.340MGP_CAROLIEiJ_G0016734Rpa19955.285Mus_caroli
ENSKMAG00000000234RPA19954.808ENSMUSG00000000751Rpa19954.750Mus_musculus
ENSKMAG00000000234RPA19955.233MGP_PahariEiJ_G0017871Rpa19955.178Mus_pahari
ENSKMAG00000000234RPA19954.720MGP_SPRETEiJ_G0017577Rpa19954.662Mus_spretus
ENSKMAG00000000234RPA19954.327ENSMPUG00000013119RPA19954.327Mustela_putorius_furo
ENSKMAG00000000234RPA19656.040ENSMLUG00000006113RPA19556.040Myotis_lucifugus
ENSKMAG00000000234RPA19555.444ENSNGAG00000004522Rpa19455.444Nannospalax_galili
ENSKMAG00000000234RPA19971.429ENSNBRG00000009672RPA19771.429Neolamprologus_brichardi
ENSKMAG00000000234RPA19461.888ENSNBRG00000020595rpa19961.888Neolamprologus_brichardi
ENSKMAG00000000234RPA19954.080ENSNLEG00000017149RPA19954.911Nomascus_leucogenys
ENSKMAG00000000234RPA19648.333ENSMEUG00000006714RPA19748.333Notamacropus_eugenii
ENSKMAG00000000234RPA19654.983ENSODEG00000009038RPA19654.983Octodon_degus
ENSKMAG00000000234RPA19960.196ENSONIG00000013135rpa19960.196Oreochromis_niloticus
ENSKMAG00000000234RPA19656.544ENSOANG00000010880RPA19856.711Ornithorhynchus_anatinus
ENSKMAG00000000234RPA19952.941ENSOCUG00000001504RPA19952.941Oryctolagus_cuniculus
ENSKMAG00000000234RPA19971.603ENSORLG00000003368RPA19971.450Oryzias_latipes
ENSKMAG00000000234RPA19961.462ENSORLG00000004856rpa19961.462Oryzias_latipes
ENSKMAG00000000234RPA19961.462ENSORLG00020008980rpa19961.462Oryzias_latipes_hni
ENSKMAG00000000234RPA19970.165ENSORLG00020015284RPA19969.865Oryzias_latipes_hni
ENSKMAG00000000234RPA16882.423ENSORLG00015005867-9682.423Oryzias_latipes_hsok
ENSKMAG00000000234RPA19961.462ENSORLG00015013982rpa19961.462Oryzias_latipes_hsok
ENSKMAG00000000234RPA19972.628ENSORLG00015020383RPA19972.628Oryzias_latipes_hsok
ENSKMAG00000000234RPA19960.000ENSOMEG00000004704rpa19960.000Oryzias_melastigma
ENSKMAG00000000234RPA19673.510ENSOMEG00000011040RPA19974.868Oryzias_melastigma
ENSKMAG00000000234RPA17563.483ENSOGAG00000029379-9863.483Otolemur_garnettii
ENSKMAG00000000234RPA19955.250ENSOGAG00000005581-9955.250Otolemur_garnettii
ENSKMAG00000000234RPA19954.397ENSOARG00000014479RPA19954.397Ovis_aries
ENSKMAG00000000234RPA19954.808ENSPPAG00000039680RPA19955.466Pan_paniscus
ENSKMAG00000000234RPA19955.323ENSPPRG00000011807RPA19955.323Panthera_pardus
ENSKMAG00000000234RPA19955.323ENSPTIG00000007898RPA19955.323Panthera_tigris_altaica
ENSKMAG00000000234RPA19955.484ENSPTRG00000008539RPA19955.395Pan_troglodytes
ENSKMAG00000000234RPA19952.978ENSPANG00000024592RPA19954.693Papio_anubis
ENSKMAG00000000234RPA19562.045ENSPKIG00000008053rpa19462.414Paramormyrops_kingsleyae
ENSKMAG00000000234RPA19756.219ENSPSIG00000015617RPA19956.219Pelodiscus_sinensis
ENSKMAG00000000234RPA19967.480ENSPMGG00000000543RPA19971.658Periophthalmus_magnuspinnatus
ENSKMAG00000000234RPA19662.069ENSPMGG00000011589rpa19862.069Periophthalmus_magnuspinnatus
ENSKMAG00000000234RPA19954.902ENSPEMG00000021061Rpa19954.902Peromyscus_maniculatus_bairdii
ENSKMAG00000000234RPA19954.080ENSPCIG00000019049RPA19955.250Phascolarctos_cinereus
ENSKMAG00000000234RPA19960.496ENSPFOG00000003987rpa19960.496Poecilia_formosa
ENSKMAG00000000234RPA19960.231ENSPLAG00000004984rpa19960.231Poecilia_latipinna
ENSKMAG00000000234RPA19573.226ENSPLAG00000008844-9773.226Poecilia_latipinna
ENSKMAG00000000234RPA19572.742ENSPMEG00000003627-9772.903Poecilia_mexicana
ENSKMAG00000000234RPA19960.496ENSPMEG00000020602rpa19961.032Poecilia_mexicana
ENSKMAG00000000234RPA110070.414ENSPREG00000010119RPA110069.630Poecilia_reticulata
ENSKMAG00000000234RPA19754.576ENSPREG00000010174rpa19954.576Poecilia_reticulata
ENSKMAG00000000234RPA19953.409ENSPCOG00000001799RPA19953.409Propithecus_coquereli
ENSKMAG00000000234RPA19955.250ENSPVAG00000002149RPA19955.250Pteropus_vampyrus
ENSKMAG00000000234RPA19961.120ENSPNYG00000016316rpa19962.566Pundamilia_nyererei
ENSKMAG00000000234RPA110075.351ENSPNYG00000024165RPA110075.195Pundamilia_nyererei
ENSKMAG00000000234RPA19954.758ENSPNAG00000008599rpa19656.272Pygocentrus_nattereri
ENSKMAG00000000234RPA19955.105ENSRNOG00000003123Rpa19955.375Rattus_norvegicus
ENSKMAG00000000234RPA19954.369ENSRBIG00000036587RPA19954.369Rhinopithecus_bieti
ENSKMAG00000000234RPA19951.294ENSRROG00000043278RPA19951.294Rhinopithecus_roxellana
ENSKMAG00000000234RPA19630.556YAR007CRFA19530.556Saccharomyces_cerevisiae
ENSKMAG00000000234RPA19156.383ENSSBOG00000030233RPA19756.991Saimiri_boliviensis_boliviensis
ENSKMAG00000000234RPA19855.340ENSSHAG00000007969RPA19856.230Sarcophilus_harrisii
ENSKMAG00000000234RPA19962.336ENSSFOG00015005362rpa19262.336Scleropages_formosus
ENSKMAG00000000234RPA19970.000ENSSMAG00000019746RPA19969.848Scophthalmus_maximus
ENSKMAG00000000234RPA19971.176ENSSDUG00000016358RPA19979.555Seriola_dumerili
ENSKMAG00000000234RPA19960.826ENSSDUG00000011949rpa19960.826Seriola_dumerili
ENSKMAG00000000234RPA19960.826ENSSLDG00000011806rpa19960.826Seriola_lalandi_dorsalis
ENSKMAG00000000234RPA19978.629ENSSLDG00000020784RPA19979.032Seriola_lalandi_dorsalis
ENSKMAG00000000234RPA19645.652ENSSARG00000007506RPA19845.652Sorex_araneus
ENSKMAG00000000234RPA19653.794ENSSPUG00000007223RPA19853.794Sphenodon_punctatus
ENSKMAG00000000234RPA19874.503ENSSPAG00000011165RPA19874.503Stegastes_partitus
ENSKMAG00000000234RPA19959.437ENSSPAG00000009903rpa19959.437Stegastes_partitus
ENSKMAG00000000234RPA19956.322ENSSSCG00000017822RPA19857.550Sus_scrofa
ENSKMAG00000000234RPA110054.106ENSTGUG00000005775RPA19954.106Taeniopygia_guttata
ENSKMAG00000000234RPA19975.538ENSTRUG00000000405RPA19975.734Takifugu_rubripes
ENSKMAG00000000234RPA19960.697ENSTRUG00000003616rpa19960.697Takifugu_rubripes
ENSKMAG00000000234RPA19960.261ENSTNIG00000016199rpa19960.362Tetraodon_nigroviridis
ENSKMAG00000000234RPA17163.741ENSTBEG00000002709RPA17263.741Tupaia_belangeri
ENSKMAG00000000234RPA19954.093ENSTTRG00000001169RPA19955.375Tursiops_truncatus
ENSKMAG00000000234RPA18675.000ENSUAMG00000015676RPA19575.000Ursus_americanus
ENSKMAG00000000234RPA19955.665ENSUMAG00000009328RPA19955.665Ursus_maritimus
ENSKMAG00000000234RPA19954.173ENSVPAG00000009443RPA19954.173Vicugna_pacos
ENSKMAG00000000234RPA19954.959ENSVVUG00000021715RPA19955.122Vulpes_vulpes
ENSKMAG00000000234RPA19956.774ENSXETG00000013538rpa19957.119Xenopus_tropicalis
ENSKMAG00000000234RPA19573.935ENSXCOG00000009899-10073.935Xiphophorus_couchianus
ENSKMAG00000000234RPA19359.717ENSXCOG00000010068rpa19460.219Xiphophorus_couchianus
ENSKMAG00000000234RPA19959.442ENSXMAG00000004102rpa19960.387Xiphophorus_maculatus
ENSKMAG00000000234RPA110079.226ENSXMAG00000010333RPA19579.226Xiphophorus_maculatus

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