EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000000238 (Gene tree)
Gene ID: 108247918
Gene Symbol: sfpq
Alias: hm:zeh0027|wis|wu:fa11h12|wu:fd10f03|zgc:85935
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 19092 bases
Position: chrLWHD01000303.1:140200-159291
Accession: 108247918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000000246	RRM_1	PF00076.22	3e-31	1	2
ENSKMAP00000000246	RRM_1	PF00076.22	3e-31	2	2
ENSKMAP00000000256	RRM_1	PF00076.22	3.2e-31	1	2
ENSKMAP00000000256	RRM_1	PF00076.22	3.2e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000000281	-	5847	XM_017436337	ENSKMAP00000000256	777 (aa)	XP_017291826	UPI0007F8FA7F
ENSKMAT00000000271	-	2607	XM_017436338	ENSKMAP00000000246	749 (aa)	XP_017291827	UPI0007F900E3

Gene Model

Click here to download ENSKMAG00000000238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000000238's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000000238	sfpq	54	70.805	ENSG00000116560	SFPQ	98	63.470	Homo_sapiens
ENSKMAG00000000238	sfpq	81	78.616	ENSAPOG00000024257	sfpq	100	66.582	Acanthochromis_polyacanthus
ENSKMAG00000000238	sfpq	53	71.296	ENSAMEG00000000815	SFPQ	100	68.807	Ailuropoda_melanoleuca
ENSKMAG00000000238	sfpq	91	73.231	ENSACIG00000000905	sfpq	100	71.401	Amphilophus_citrinellus
ENSKMAG00000000238	sfpq	82	78.144	ENSAOCG00000002889	sfpq	100	67.424	Amphiprion_ocellaris
ENSKMAG00000000238	sfpq	82	78.144	ENSAPEG00000016556	sfpq	100	67.424	Amphiprion_percula
ENSKMAG00000000238	sfpq	84	78.914	ENSATEG00000002981	sfpq	100	78.936	Anabas_testudineus
ENSKMAG00000000238	sfpq	50	63.081	ENSANAG00000027438	-	92	50.078	Aotus_nancymaae
ENSKMAG00000000238	sfpq	82	79.140	ENSACLG00000022332	sfpq	100	66.540	Astatotilapia_calliptera
ENSKMAG00000000238	sfpq	53	78.520	ENSAMXG00000011538	sfpq	79	69.143	Astyanax_mexicanus
ENSKMAG00000000238	sfpq	54	70.805	ENSBTAG00000016328	SFPQ	62	69.725	Bos_taurus
ENSKMAG00000000238	sfpq	54	70.805	ENSCJAG00000001431	SFPQ	92	55.228	Callithrix_jacchus
ENSKMAG00000000238	sfpq	54	65.977	ENSCAFG00000017608	-	93	54.364	Canis_familiaris
ENSKMAG00000000238	sfpq	54	70.805	ENSCAFG00000003595	-	66	69.725	Canis_familiaris
ENSKMAG00000000238	sfpq	54	68.506	ENSCAFG00000018271	-	94	54.421	Canis_familiaris
ENSKMAG00000000238	sfpq	54	68.506	ENSCAFG00020004881	-	94	54.671	Canis_lupus_dingo
ENSKMAG00000000238	sfpq	54	70.805	ENSCHIG00000023097	SFPQ	61	69.725	Capra_hircus
ENSKMAG00000000238	sfpq	54	70.805	ENSCCAG00000029361	-	92	55.310	Cebus_capucinus
ENSKMAG00000000238	sfpq	54	47.166	ENSCATG00000032664	-	91	39.678	Cercocebus_atys
ENSKMAG00000000238	sfpq	54	70.805	ENSCSAG00000001082	SFPQ	91	56.156	Chlorocebus_sabaeus
ENSKMAG00000000238	sfpq	55	69.042	ENSCPBG00000018674	SFPQ	92	56.056	Chrysemys_picta_bellii
ENSKMAG00000000238	sfpq	54	71.034	ENSCGRG00001011698	Sfpq	90	56.012	Cricetulus_griseus_chok1gshd
ENSKMAG00000000238	sfpq	53	71.562	ENSCGRG00000010128	Sfpq	95	70.139	Cricetulus_griseus_crigri
ENSKMAG00000000238	sfpq	95	73.029	ENSCSEG00000007852	sfpq	100	64.451	Cynoglossus_semilaevis
ENSKMAG00000000238	sfpq	87	70.757	ENSCVAG00000019538	sfpq	98	70.238	Cyprinodon_variegatus
ENSKMAG00000000238	sfpq	54	76.651	ENSDARG00000011564	sfpq	100	80.000	Danio_rerio
ENSKMAG00000000238	sfpq	54	70.805	ENSDNOG00000049454	SFPQ	92	55.213	Dasypus_novemcinctus
ENSKMAG00000000238	sfpq	54	70.805	ENSDORG00000008109	Sfpq	92	55.758	Dipodomys_ordii
ENSKMAG00000000238	sfpq	53	65.429	ENSETEG00000001095	SFPQ	61	61.404	Echinops_telfairi
ENSKMAG00000000238	sfpq	54	70.805	ENSEASG00005012012	SFPQ	90	54.818	Equus_asinus_asinus
ENSKMAG00000000238	sfpq	54	70.805	ENSECAG00000000642	SFPQ	90	54.818	Equus_caballus
ENSKMAG00000000238	sfpq	59	71.087	ENSELUG00000023145	sfpq	69	73.455	Esox_lucius
ENSKMAG00000000238	sfpq	54	70.805	ENSFCAG00000042862	SFPQ	92	55.275	Felis_catus
ENSKMAG00000000238	sfpq	68	74.564	ENSFHEG00000015200	sfpq	100	69.697	Fundulus_heteroclitus
ENSKMAG00000000238	sfpq	66	77.857	ENSGMOG00000011957	sfpq	91	78.095	Gadus_morhua
ENSKMAG00000000238	sfpq	67	79.335	ENSGMOG00000011950	SFPQ	99	79.572	Gadus_morhua
ENSKMAG00000000238	sfpq	54	70.455	ENSGALG00000002514	SFPQ	94	56.378	Gallus_gallus
ENSKMAG00000000238	sfpq	100	67.004	ENSGAFG00000014571	sfpq	100	65.924	Gambusia_affinis
ENSKMAG00000000238	sfpq	88	77.662	ENSGACG00000002034	sfpq	94	76.264	Gasterosteus_aculeatus
ENSKMAG00000000238	sfpq	53	71.462	ENSGGOG00000026354	SFPQ	100	67.614	Gorilla_gorilla
ENSKMAG00000000238	sfpq	92	68.027	ENSHBUG00000016818	sfpq	100	66.160	Haplochromis_burtoni
ENSKMAG00000000238	sfpq	54	70.387	ENSHGLG00000012001	SFPQ	91	56.410	Heterocephalus_glaber_female
ENSKMAG00000000238	sfpq	100	62.374	ENSHCOG00000008612	sfpq	100	72.210	Hippocampus_comes
ENSKMAG00000000238	sfpq	56	74.434	ENSIPUG00000013076	SFPQ	93	65.000	Ictalurus_punctatus
ENSKMAG00000000238	sfpq	54	70.805	ENSJJAG00000015633	Sfpq	91	55.455	Jaculus_jaculus
ENSKMAG00000000238	sfpq	58	77.701	ENSLBEG00000003163	sfpq	98	61.893	Labrus_bergylta
ENSKMAG00000000238	sfpq	57	65.789	ENSLACG00000014728	SFPQ	75	65.789	Latimeria_chalumnae
ENSKMAG00000000238	sfpq	53	73.832	ENSLOCG00000001067	sfpq	68	77.023	Lepisosteus_oculatus
ENSKMAG00000000238	sfpq	54	70.805	ENSLAFG00000015951	SFPQ	96	56.279	Loxodonta_africana
ENSKMAG00000000238	sfpq	54	70.805	ENSMFAG00000000797	SFPQ	93	55.473	Macaca_fascicularis
ENSKMAG00000000238	sfpq	54	70.805	ENSMMUG00000019154	SFPQ	93	55.178	Macaca_mulatta
ENSKMAG00000000238	sfpq	54	70.805	ENSMNEG00000038895	SFPQ	92	55.310	Macaca_nemestrina
ENSKMAG00000000238	sfpq	91	74.237	ENSMAMG00000007875	sfpq	100	76.211	Mastacembelus_armatus
ENSKMAG00000000238	sfpq	92	68.966	ENSMZEG00005026091	sfpq	100	79.958	Maylandia_zebra
ENSKMAG00000000238	sfpq	54	71.034	ENSMAUG00000006402	Sfpq	92	56.278	Mesocricetus_auratus
ENSKMAG00000000238	sfpq	53	71.296	ENSMICG00000027265	SFPQ	92	55.373	Microcebus_murinus
ENSKMAG00000000238	sfpq	54	68.276	ENSMOCG00000019075	Sfpq	90	66.972	Microtus_ochrogaster
ENSKMAG00000000238	sfpq	96	73.062	ENSMMOG00000001074	sfpq	100	73.861	Mola_mola
ENSKMAG00000000238	sfpq	94	71.269	ENSMALG00000010381	sfpq	100	75.051	Monopterus_albus
ENSKMAG00000000238	sfpq	54	71.034	MGP_CAROLIEiJ_G0026487	Sfpq	62	69.725	Mus_caroli
ENSKMAG00000000238	sfpq	54	71.034	ENSMUSG00000028820	Sfpq	62	69.725	Mus_musculus
ENSKMAG00000000238	sfpq	54	71.034	MGP_PahariEiJ_G0028818	Sfpq	92	55.640	Mus_pahari
ENSKMAG00000000238	sfpq	54	71.034	MGP_SPRETEiJ_G0027466	Sfpq	62	69.725	Mus_spretus
ENSKMAG00000000238	sfpq	55	70.429	ENSMLUG00000027090	SFPQ	99	69.144	Myotis_lucifugus
ENSKMAG00000000238	sfpq	54	71.034	ENSNGAG00000000888	Sfpq	92	55.000	Nannospalax_galili
ENSKMAG00000000238	sfpq	90	78.143	ENSNBRG00000017479	sfpq	100	79.747	Neolamprologus_brichardi
ENSKMAG00000000238	sfpq	54	70.737	ENSMEUG00000014082	SFPQ	62	69.355	Notamacropus_eugenii
ENSKMAG00000000238	sfpq	56	69.383	ENSOPRG00000013696	SFPQ	64	68.352	Ochotona_princeps
ENSKMAG00000000238	sfpq	52	62.381	ENSODEG00000005485	SFPQ	76	60.952	Octodon_degus
ENSKMAG00000000238	sfpq	88	77.626	ENSONIG00000017737	sfpq	100	79.036	Oreochromis_niloticus
ENSKMAG00000000238	sfpq	54	70.805	ENSOCUG00000001877	SFPQ	86	69.495	Oryctolagus_cuniculus
ENSKMAG00000000238	sfpq	100	65.322	ENSORLG00000007459	sfpq	100	66.247	Oryzias_latipes
ENSKMAG00000000238	sfpq	100	64.528	ENSORLG00020011818	sfpq	100	66.121	Oryzias_latipes_hni
ENSKMAG00000000238	sfpq	100	70.128	ENSORLG00015002131	sfpq	100	65.621	Oryzias_latipes_hsok
ENSKMAG00000000238	sfpq	100	66.208	ENSOMEG00000018020	sfpq	100	68.010	Oryzias_melastigma
ENSKMAG00000000238	sfpq	54	70.872	ENSOGAG00000027710	SFPQ	82	69.725	Otolemur_garnettii
ENSKMAG00000000238	sfpq	53	71.528	ENSOARG00000019439	SFPQ	66	70.208	Ovis_aries
ENSKMAG00000000238	sfpq	54	70.805	ENSPPAG00000030078	SFPQ	61	69.725	Pan_paniscus
ENSKMAG00000000238	sfpq	54	64.598	ENSPTRG00000000518	SFPQ	91	51.327	Pan_troglodytes
ENSKMAG00000000238	sfpq	54	70.805	ENSPANG00000005380	SFPQ	65	69.495	Papio_anubis
ENSKMAG00000000238	sfpq	53	76.235	ENSPKIG00000023035	sfpq	73	76.706	Paramormyrops_kingsleyae
ENSKMAG00000000238	sfpq	53	70.833	ENSPSIG00000011494	SFPQ	100	69.213	Pelodiscus_sinensis
ENSKMAG00000000238	sfpq	86	70.450	ENSPMGG00000023883	sfpq	90	74.519	Periophthalmus_magnuspinnatus
ENSKMAG00000000238	sfpq	54	71.034	ENSPEMG00000009794	Sfpq	90	69.495	Peromyscus_maniculatus_bairdii
ENSKMAG00000000238	sfpq	54	70.575	ENSPCIG00000000923	SFPQ	62	69.425	Phascolarctos_cinereus
ENSKMAG00000000238	sfpq	100	74.320	ENSPFOG00000003127	sfpq	100	70.063	Poecilia_formosa
ENSKMAG00000000238	sfpq	100	68.061	ENSPREG00000008060	sfpq	100	68.142	Poecilia_reticulata
ENSKMAG00000000238	sfpq	54	70.805	ENSPPYG00000001560	SFPQ	92	55.310	Pongo_abelii
ENSKMAG00000000238	sfpq	53	70.862	ENSPCAG00000006164	SFPQ	60	69.767	Procavia_capensis
ENSKMAG00000000238	sfpq	54	70.805	ENSPCOG00000027127	SFPQ	88	55.354	Propithecus_coquereli
ENSKMAG00000000238	sfpq	54	68.360	ENSPVAG00000001865	SFPQ	62	67.281	Pteropus_vampyrus
ENSKMAG00000000238	sfpq	82	78.925	ENSPNYG00000007494	sfpq	100	65.301	Pundamilia_nyererei
ENSKMAG00000000238	sfpq	62	69.495	ENSPNAG00000002128	sfpq	92	66.129	Pygocentrus_nattereri
ENSKMAG00000000238	sfpq	54	71.034	ENSRNOG00000058461	Sfpq	63	69.725	Rattus_norvegicus
ENSKMAG00000000238	sfpq	53	65.035	ENSRBIG00000035286	SFPQ	100	67.614	Rhinopithecus_bieti
ENSKMAG00000000238	sfpq	53	71.296	ENSRROG00000040992	SFPQ	100	67.614	Rhinopithecus_roxellana
ENSKMAG00000000238	sfpq	50	73.316	ENSSHAG00000016107	-	97	66.592	Sarcophilus_harrisii
ENSKMAG00000000238	sfpq	65	67.961	ENSSFOG00015009289	sfpq	77	78.436	Scleropages_formosus
ENSKMAG00000000238	sfpq	92	76.778	ENSSMAG00000018201	sfpq	100	76.289	Scophthalmus_maximus
ENSKMAG00000000238	sfpq	90	77.980	ENSSDUG00000008402	sfpq	100	77.980	Seriola_dumerili
ENSKMAG00000000238	sfpq	90	77.980	ENSSLDG00000018917	sfpq	100	77.980	Seriola_lalandi_dorsalis
ENSKMAG00000000238	sfpq	79	79.101	ENSSPAG00000016550	sfpq	100	65.184	Stegastes_partitus
ENSKMAG00000000238	sfpq	54	70.805	ENSSSCG00000035690	SFPQ	92	54.882	Sus_scrofa
ENSKMAG00000000238	sfpq	53	69.907	ENSTGUG00000001722	SFPQ	100	69.374	Taeniopygia_guttata
ENSKMAG00000000238	sfpq	90	72.447	ENSTRUG00000003783	sfpq	100	76.680	Takifugu_rubripes
ENSKMAG00000000238	sfpq	66	77.369	ENSTNIG00000011331	sfpq	96	78.373	Tetraodon_nigroviridis
ENSKMAG00000000238	sfpq	54	68.966	ENSTTRG00000013930	SFPQ	62	67.816	Tursiops_truncatus
ENSKMAG00000000238	sfpq	100	68.068	ENSXMAG00000016391	sfpq	100	68.099	Xiphophorus_maculatus