EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000000286 (Gene tree)
Gene ID: 108239876
Gene Symbol: r3hcc1
Alias: si:dkey-191l12.1
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 3764 bases
Position: chrLWHD01000068.1:1089848-1093611
Accession: 108239876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000000300	R3H	PF01424.22	5.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000000329	-	1390	XM_017422897	ENSKMAP00000000300	390 (aa)	XP_017278386	UPI0007F8C4B4

Gene Model

Click here to download ENSKMAG00000000286's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000000286's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000000286	r3hcc1	98	32.282	ENSG00000104679	R3HCC1	91	32.282	Homo_sapiens
ENSKMAG00000000286	r3hcc1	99	58.629	ENSAPOG00000003616	r3hcc1	89	59.241	Acanthochromis_polyacanthus
ENSKMAG00000000286	r3hcc1	98	32.683	ENSAMEG00000002963	R3HCC1	84	32.452	Ailuropoda_melanoleuca
ENSKMAG00000000286	r3hcc1	100	52.570	ENSACIG00000017144	r3hcc1	95	52.804	Amphilophus_citrinellus
ENSKMAG00000000286	r3hcc1	99	61.675	ENSAOCG00000003945	r3hcc1	96	62.532	Amphiprion_ocellaris
ENSKMAG00000000286	r3hcc1	99	61.675	ENSAPEG00000003613	r3hcc1	96	61.675	Amphiprion_percula
ENSKMAG00000000286	r3hcc1	97	59.694	ENSATEG00000023860	r3hcc1	100	60.784	Anabas_testudineus
ENSKMAG00000000286	r3hcc1	87	48.855	ENSACAG00000016627	R3HCC1	90	35.351	Anolis_carolinensis
ENSKMAG00000000286	r3hcc1	99	31.920	ENSANAG00000036169	R3HCC1	91	31.458	Aotus_nancymaae
ENSKMAG00000000286	r3hcc1	98	34.058	ENSBTAG00000025830	R3HCC1	89	32.227	Bos_taurus
ENSKMAG00000000286	r3hcc1	99	31.026	ENSCJAG00000020118	R3HCC1	91	31.026	Callithrix_jacchus
ENSKMAG00000000286	r3hcc1	71	40.764	ENSCAFG00000009210	R3HCC1	55	46.212	Canis_familiaris
ENSKMAG00000000286	r3hcc1	98	33.571	ENSCHIG00000009107	R3HCC1	92	32.688	Capra_hircus
ENSKMAG00000000286	r3hcc1	98	34.223	ENSTSYG00000000511	R3HCC1	71	33.333	Carlito_syrichta
ENSKMAG00000000286	r3hcc1	62	40.741	ENSCAPG00000015813	R3HCC1	58	39.167	Cavia_aperea
ENSKMAG00000000286	r3hcc1	67	44.755	ENSCPOG00000009696	R3HCC1	59	44.755	Cavia_porcellus
ENSKMAG00000000286	r3hcc1	98	31.382	ENSCCAG00000037811	R3HCC1	91	31.714	Cebus_capucinus
ENSKMAG00000000286	r3hcc1	98	31.925	ENSCATG00000032971	R3HCC1	90	32.391	Cercocebus_atys
ENSKMAG00000000286	r3hcc1	99	35.024	ENSCLAG00000015556	R3HCC1	78	33.732	Chinchilla_lanigera
ENSKMAG00000000286	r3hcc1	98	31.925	ENSCSAG00000016250	R3HCC1	84	32.930	Chlorocebus_sabaeus
ENSKMAG00000000286	r3hcc1	98	32.817	ENSCANG00000029441	R3HCC1	90	32.391	Colobus_angolensis_palliatus
ENSKMAG00000000286	r3hcc1	70	42.405	ENSCGRG00001014977	R3hcc1	92	31.839	Cricetulus_griseus_chok1gshd
ENSKMAG00000000286	r3hcc1	70	42.405	ENSCGRG00000004454	R3hcc1	92	31.839	Cricetulus_griseus_crigri
ENSKMAG00000000286	r3hcc1	100	58.706	ENSCSEG00000005748	r3hcc1	96	58.706	Cynoglossus_semilaevis
ENSKMAG00000000286	r3hcc1	83	54.572	ENSCVAG00000002640	r3hcc1	90	54.734	Cyprinodon_variegatus
ENSKMAG00000000286	r3hcc1	99	43.959	ENSDARG00000099593	r3hcc1	93	43.702	Danio_rerio
ENSKMAG00000000286	r3hcc1	98	30.095	ENSDNOG00000007168	R3HCC1	84	30.332	Dasypus_novemcinctus
ENSKMAG00000000286	r3hcc1	82	40.909	ENSDORG00000026365	R3hcc1	66	42.177	Dipodomys_ordii
ENSKMAG00000000286	r3hcc1	69	42.857	ENSEASG00005018782	R3HCC1	74	33.575	Equus_asinus_asinus
ENSKMAG00000000286	r3hcc1	69	42.857	ENSECAG00000025013	R3HCC1	90	33.816	Equus_caballus
ENSKMAG00000000286	r3hcc1	98	31.695	ENSEEUG00000011918	R3HCC1	57	44.697	Erinaceus_europaeus
ENSKMAG00000000286	r3hcc1	100	48.926	ENSELUG00000023650	r3hcc1	100	47.381	Esox_lucius
ENSKMAG00000000286	r3hcc1	98	34.190	ENSFCAG00000012395	R3HCC1	88	32.360	Felis_catus
ENSKMAG00000000286	r3hcc1	96	36.364	ENSGMOG00000017590	-	91	36.631	Gadus_morhua
ENSKMAG00000000286	r3hcc1	100	66.584	ENSGAFG00000008747	-	93	66.925	Gambusia_affinis
ENSKMAG00000000286	r3hcc1	98	56.743	ENSGACG00000008447	r3hcc1	90	55.949	Gasterosteus_aculeatus
ENSKMAG00000000286	r3hcc1	98	33.090	ENSGGOG00000013817	R3HCC1	91	32.374	Gorilla_gorilla
ENSKMAG00000000286	r3hcc1	72	80.328	ENSHBUG00000022250	-	79	80.328	Haplochromis_burtoni
ENSKMAG00000000286	r3hcc1	98	32.419	ENSHGLG00000010517	R3HCC1	84	33.824	Heterocephalus_glaber_female
ENSKMAG00000000286	r3hcc1	98	32.419	ENSHGLG00100006388	R3HCC1	84	33.824	Heterocephalus_glaber_male
ENSKMAG00000000286	r3hcc1	98	51.832	ENSHCOG00000011745	r3hcc1	87	53.213	Hippocampus_comes
ENSKMAG00000000286	r3hcc1	98	47.150	ENSIPUG00000024504	r3hcc1	82	46.632	Ictalurus_punctatus
ENSKMAG00000000286	r3hcc1	70	44.156	ENSSTOG00000027130	R3HCC1	55	47.059	Ictidomys_tridecemlineatus
ENSKMAG00000000286	r3hcc1	98	31.473	ENSJJAG00000013075	R3hcc1	92	33.102	Jaculus_jaculus
ENSKMAG00000000286	r3hcc1	72	47.020	ENSLACG00000011894	R3HCC1	60	49.630	Latimeria_chalumnae
ENSKMAG00000000286	r3hcc1	98	44.730	ENSLOCG00000015442	r3hcc1	96	44.615	Lepisosteus_oculatus
ENSKMAG00000000286	r3hcc1	71	43.671	ENSLAFG00000016137	R3HCC1	53	45.578	Loxodonta_africana
ENSKMAG00000000286	r3hcc1	98	31.925	ENSMFAG00000032894	R3HCC1	91	32.911	Macaca_fascicularis
ENSKMAG00000000286	r3hcc1	98	31.690	ENSMMUG00000016655	R3HCC1	91	32.506	Macaca_mulatta
ENSKMAG00000000286	r3hcc1	98	34.704	ENSMNEG00000043283	R3HCC1	90	34.278	Macaca_nemestrina
ENSKMAG00000000286	r3hcc1	98	33.075	ENSMLEG00000030147	R3HCC1	91	32.300	Mandrillus_leucophaeus
ENSKMAG00000000286	r3hcc1	100	59.801	ENSMAMG00000018146	r3hcc1	100	60.794	Mastacembelus_armatus
ENSKMAG00000000286	r3hcc1	98	33.824	ENSMGAG00000001356	R3HCC1	84	34.074	Meleagris_gallopavo
ENSKMAG00000000286	r3hcc1	98	31.555	ENSMICG00000011146	R3HCC1	86	32.151	Microcebus_murinus
ENSKMAG00000000286	r3hcc1	78	42.857	ENSMOCG00000018508	R3hcc1	62	44.056	Microtus_ochrogaster
ENSKMAG00000000286	r3hcc1	76	31.269	ENSMODG00000016809	-	74	32.099	Monodelphis_domestica
ENSKMAG00000000286	r3hcc1	100	56.553	ENSMALG00000000731	r3hcc1	100	56.618	Monopterus_albus
ENSKMAG00000000286	r3hcc1	68	42.857	MGP_CAROLIEiJ_G0019467	R3hcc1	54	44.056	Mus_caroli
ENSKMAG00000000286	r3hcc1	68	42.667	ENSMUSG00000034194	R3hcc1	54	44.056	Mus_musculus
ENSKMAG00000000286	r3hcc1	68	42.000	MGP_PahariEiJ_G0030484	R3hcc1	53	43.357	Mus_pahari
ENSKMAG00000000286	r3hcc1	68	42.667	MGP_SPRETEiJ_G0020359	R3hcc1	54	44.056	Mus_spretus
ENSKMAG00000000286	r3hcc1	98	33.656	ENSMPUG00000003457	R3HCC1	80	33.414	Mustela_putorius_furo
ENSKMAG00000000286	r3hcc1	98	31.368	ENSMLUG00000000266	R3HCC1	84	31.915	Myotis_lucifugus
ENSKMAG00000000286	r3hcc1	97	31.081	ENSNGAG00000016747	R3hcc1	91	31.674	Nannospalax_galili
ENSKMAG00000000286	r3hcc1	81	45.075	ENSNBRG00000016975	-	76	88.889	Neolamprologus_brichardi
ENSKMAG00000000286	r3hcc1	90	31.347	ENSNLEG00000015944	R3HCC1	80	31.234	Nomascus_leucogenys
ENSKMAG00000000286	r3hcc1	99	34.414	ENSMEUG00000010587	R3HCC1	92	34.577	Notamacropus_eugenii
ENSKMAG00000000286	r3hcc1	98	33.732	ENSOPRG00000013390	R3HCC1	87	33.489	Ochotona_princeps
ENSKMAG00000000286	r3hcc1	99	30.586	ENSODEG00000007529	R3HCC1	93	31.707	Octodon_degus
ENSKMAG00000000286	r3hcc1	98	33.666	ENSOANG00000013877	R3HCC1	89	32.426	Ornithorhynchus_anatinus
ENSKMAG00000000286	r3hcc1	98	33.081	ENSOCUG00000023554	R3HCC1	79	33.254	Oryctolagus_cuniculus
ENSKMAG00000000286	r3hcc1	100	50.895	ENSORLG00000016816	r3hcc1	100	50.761	Oryzias_latipes
ENSKMAG00000000286	r3hcc1	100	50.384	ENSORLG00020012005	r3hcc1	100	50.254	Oryzias_latipes_hni
ENSKMAG00000000286	r3hcc1	100	50.639	ENSORLG00015007018	r3hcc1	100	50.633	Oryzias_latipes_hsok
ENSKMAG00000000286	r3hcc1	100	52.163	ENSOMEG00000000816	r3hcc1	100	51.654	Oryzias_melastigma
ENSKMAG00000000286	r3hcc1	97	33.333	ENSOGAG00000001291	R3HCC1	84	32.266	Otolemur_garnettii
ENSKMAG00000000286	r3hcc1	98	33.333	ENSOARG00000010146	R3HCC1	89	33.413	Ovis_aries
ENSKMAG00000000286	r3hcc1	98	32.771	ENSPPAG00000033165	R3HCC1	91	32.161	Pan_paniscus
ENSKMAG00000000286	r3hcc1	98	32.847	ENSPPRG00000002522	R3HCC1	92	32.603	Panthera_pardus
ENSKMAG00000000286	r3hcc1	94	34.500	ENSPTIG00000011230	R3HCC1	92	33.249	Panthera_tigris_altaica
ENSKMAG00000000286	r3hcc1	98	33.012	ENSPTRG00000020076	R3HCC1	91	31.910	Pan_troglodytes
ENSKMAG00000000286	r3hcc1	98	31.925	ENSPANG00000000453	R3HCC1	90	32.737	Papio_anubis
ENSKMAG00000000286	r3hcc1	96	46.982	ENSPKIG00000020397	-	96	46.457	Paramormyrops_kingsleyae
ENSKMAG00000000286	r3hcc1	96	46.073	ENSPKIG00000014426	-	96	46.335	Paramormyrops_kingsleyae
ENSKMAG00000000286	r3hcc1	98	36.275	ENSPSIG00000017664	R3HCC1	90	36.275	Pelodiscus_sinensis
ENSKMAG00000000286	r3hcc1	53	59.016	ENSPMGG00000007792	r3hcc1	93	35.663	Periophthalmus_magnuspinnatus
ENSKMAG00000000286	r3hcc1	68	43.919	ENSPEMG00000007118	R3hcc1	55	45.070	Peromyscus_maniculatus_bairdii
ENSKMAG00000000286	r3hcc1	96	32.746	ENSPCIG00000022718	-	83	32.338	Phascolarctos_cinereus
ENSKMAG00000000286	r3hcc1	100	66.089	ENSPFOG00000022301	r3hcc1	87	66.583	Poecilia_formosa
ENSKMAG00000000286	r3hcc1	100	66.337	ENSPLAG00000010794	r3hcc1	87	66.834	Poecilia_latipinna
ENSKMAG00000000286	r3hcc1	100	66.089	ENSPMEG00000022515	r3hcc1	87	66.583	Poecilia_mexicana
ENSKMAG00000000286	r3hcc1	100	66.337	ENSPREG00000000713	r3hcc1	87	66.834	Poecilia_reticulata
ENSKMAG00000000286	r3hcc1	94	34.165	ENSPPYG00000018436	R3HCC1	96	33.838	Pongo_abelii
ENSKMAG00000000286	r3hcc1	71	45.139	ENSPCAG00000012229	R3HCC1	62	45.139	Procavia_capensis
ENSKMAG00000000286	r3hcc1	99	32.391	ENSPCOG00000027554	R3HCC1	91	32.648	Propithecus_coquereli
ENSKMAG00000000286	r3hcc1	99	32.688	ENSPVAG00000009829	R3HCC1	89	32.688	Pteropus_vampyrus
ENSKMAG00000000286	r3hcc1	96	45.455	ENSPNAG00000023875	r3hcc1	94	45.213	Pygocentrus_nattereri
ENSKMAG00000000286	r3hcc1	98	33.172	ENSRBIG00000028045	R3HCC1	91	32.688	Rhinopithecus_bieti
ENSKMAG00000000286	r3hcc1	98	33.172	ENSRROG00000031126	R3HCC1	90	32.908	Rhinopithecus_roxellana
ENSKMAG00000000286	r3hcc1	99	31.450	ENSSBOG00000022590	R3HCC1	91	32.439	Saimiri_boliviensis_boliviensis
ENSKMAG00000000286	r3hcc1	99	48.866	ENSSFOG00015013507	r3hcc1	100	48.866	Scleropages_formosus
ENSKMAG00000000286	r3hcc1	100	61.235	ENSSMAG00000008647	r3hcc1	100	61.235	Scophthalmus_maximus
ENSKMAG00000000286	r3hcc1	100	64.461	ENSSDUG00000022786	r3hcc1	94	66.667	Seriola_dumerili
ENSKMAG00000000286	r3hcc1	100	64.951	ENSSLDG00000019031	r3hcc1	94	66.420	Seriola_lalandi_dorsalis
ENSKMAG00000000286	r3hcc1	99	60.152	ENSSPAG00000013497	r3hcc1	96	60.152	Stegastes_partitus
ENSKMAG00000000286	r3hcc1	68	40.940	ENSSSCG00000037347	-	51	41.096	Sus_scrofa
ENSKMAG00000000286	r3hcc1	98	32.706	ENSSSCG00000039915	-	89	34.063	Sus_scrofa
ENSKMAG00000000286	r3hcc1	100	48.371	ENSTRUG00000015880	r3hcc1	95	47.250	Takifugu_rubripes
ENSKMAG00000000286	r3hcc1	69	43.333	ENSUAMG00000007344	R3HCC1	58	46.212	Ursus_americanus
ENSKMAG00000000286	r3hcc1	71	40.764	ENSVVUG00000005056	R3HCC1	55	46.212	Vulpes_vulpes
ENSKMAG00000000286	r3hcc1	97	61.954	ENSXCOG00000017626	r3hcc1	86	63.239	Xiphophorus_couchianus
ENSKMAG00000000286	r3hcc1	100	66.085	ENSXMAG00000018375	r3hcc1	93	67.442	Xiphophorus_maculatus