EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000000402 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 2730 bases
Position: chrLWHD01000472.1:89771-92500
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000000465	zf-C2H2	PF00096.26	3.5e-17	1	3
ENSKMAP00000000465	zf-C2H2	PF00096.26	3.5e-17	2	3
ENSKMAP00000000465	zf-C2H2	PF00096.26	3.5e-17	3	3
ENSKMAP00000000465	zf-met	PF12874.7	0.0002	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000000495	-	2071	-	ENSKMAP00000000465	414 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000000402's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000000402's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000000402	-	55	48.718	ENSKMAG00000006231	-	88	58.824
ENSKMAG00000000402	-	50	54.054	ENSKMAG00000012097	-	62	54.054

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000000402	-	74	60.000	ENSATEG00000014684	-	97	60.000	Anabas_testudineus
ENSKMAG00000000402	-	99	58.129	ENSACLG00000023678	-	99	58.036	Astatotilapia_calliptera
ENSKMAG00000000402	-	99	57.556	ENSHBUG00000011272	-	99	58.444	Haplochromis_burtoni
ENSKMAG00000000402	-	99	58.482	ENSMZEG00005020340	-	99	58.259	Maylandia_zebra
ENSKMAG00000000402	-	75	60.299	ENSONIG00000012374	-	98	59.940	Oreochromis_niloticus
ENSKMAG00000000402	-	99	57.778	ENSPNYG00000016402	-	99	57.684	Pundamilia_nyererei
ENSKMAG00000000402	-	52	46.753	ENSSFOG00015006083	-	67	46.835	Scleropages_formosus
ENSKMAG00000000402	-	99	59.471	ENSSPAG00000008950	-	99	58.850	Stegastes_partitus