EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000000427 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 4073 bases
Position: chrLWHD01000472.1:92607-96679
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000000489	zf-C2H2	PF00096.26	4.4e-19	1	3
ENSKMAP00000000489	zf-C2H2	PF00096.26	4.4e-19	2	3
ENSKMAP00000000489	zf-C2H2	PF00096.26	4.4e-19	3	3
ENSKMAP00000000489	zf-met	PF12874.7	1.7e-07	1	2
ENSKMAP00000000489	zf-met	PF12874.7	1.7e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000000518	-	3288	-	ENSKMAP00000000489	422 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000000427's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000000427's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000000427	-	66	42.105	ENSKMAG00000009979	-	62	46.512
ENSKMAG00000000427	-	52	46.400	ENSKMAG00000000718	-	99	46.400
ENSKMAG00000000427	-	92	49.153	ENSKMAG00000000597	-	95	47.619
ENSKMAG00000000427	-	64	40.625	ENSKMAG00000000462	-	82	40.625
ENSKMAG00000000427	-	71	49.580	ENSKMAG00000002093	-	81	51.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000000427	-	98	57.110	ENSAPOG00000022184	-	100	56.738	Acanthochromis_polyacanthus
ENSKMAG00000000427	-	51	42.105	ENSACIG00000006228	-	66	42.105	Amphilophus_citrinellus
ENSKMAG00000000427	-	98	59.189	ENSAOCG00000022836	-	100	58.173	Amphiprion_ocellaris
ENSKMAG00000000427	-	96	46.667	ENSAOCG00000016409	-	60	46.667	Amphiprion_ocellaris
ENSKMAG00000000427	-	98	58.950	ENSAPEG00000003776	-	100	57.412	Amphiprion_percula
ENSKMAG00000000427	-	96	48.760	ENSAPEG00000008746	-	60	48.760	Amphiprion_percula
ENSKMAG00000000427	-	97	56.838	ENSATEG00000014684	-	92	84.211	Anabas_testudineus
ENSKMAG00000000427	-	52	46.591	ENSGMOG00000009187	ZNF626	74	46.667	Gadus_morhua
ENSKMAG00000000427	-	98	63.488	ENSGAFG00000018506	-	100	63.934	Gambusia_affinis
ENSKMAG00000000427	-	97	54.176	ENSLBEG00000026060	-	99	53.747	Labrus_bergylta
ENSKMAG00000000427	-	56	53.710	ENSLBEG00000009663	-	89	53.710	Labrus_bergylta
ENSKMAG00000000427	-	50	41.880	ENSMALG00000011756	-	65	42.963	Monopterus_albus
ENSKMAG00000000427	-	97	62.937	ENSPLAG00000011958	-	99	62.763	Poecilia_latipinna
ENSKMAG00000000427	-	97	63.403	ENSPMEG00000006760	-	99	63.232	Poecilia_mexicana
ENSKMAG00000000427	-	98	63.510	ENSPREG00000021124	-	100	63.443	Poecilia_reticulata
ENSKMAG00000000427	-	55	44.961	ENSSMAG00000013663	-	83	58.442	Scophthalmus_maximus
ENSKMAG00000000427	-	73	57.057	ENSSPAG00000008950	-	51	86.735	Stegastes_partitus
ENSKMAG00000000427	-	50	62.673	ENSXMAG00000022894	-	74	63.033	Xiphophorus_maculatus