EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000000539 (Gene tree)
Gene ID: 108249633
Gene Symbol: -
Alias: -
Full Name: zinc finger and BTB domain-containing protein 49-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 2900 bases
Position: chrLWHD01000472.1:126082-128981
Accession: 108249633
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000000640	zf-C2H2	PF00096.26	8.6e-19	1	4
ENSKMAP00000000640	zf-C2H2	PF00096.26	8.6e-19	2	4
ENSKMAP00000000640	zf-C2H2	PF00096.26	8.6e-19	3	4
ENSKMAP00000000640	zf-C2H2	PF00096.26	8.6e-19	4	4
ENSKMAP00000000640	zf-met	PF12874.7	8e-07	1	2
ENSKMAP00000000640	zf-met	PF12874.7	8e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000000669	-	2263	XM_025002236	ENSKMAP00000000640	372 (aa)	XP_024858004	UPI000D530571

Gene Model

Click here to download ENSKMAG00000000539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000000539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000000539	-	63	42.609	ENSKMAG00000006231	-	94	51.852
ENSKMAG00000000539	-	97	40.870	ENSKMAG00000018648	-	61	40.870
ENSKMAG00000000539	-	100	46.903	ENSKMAG00000000387	-	98	47.414
ENSKMAG00000000539	-	67	40.196	ENSKMAG00000013843	-	57	43.038
ENSKMAG00000000539	-	61	36.154	ENSKMAG00000006450	-	98	38.053
ENSKMAG00000000539	-	73	51.020	ENSKMAG00000010903	-	99	46.552
ENSKMAG00000000539	-	58	41.739	ENSKMAG00000012202	-	96	41.739
ENSKMAG00000000539	-	51	38.596	ENSKMAG00000013745	-	53	48.696
ENSKMAG00000000539	-	70	43.478	ENSKMAG00000000073	-	76	43.478
ENSKMAG00000000539	-	52	35.246	ENSKMAG00000010330	zbtb47b	55	38.532
ENSKMAG00000000539	-	96	44.000	ENSKMAG00000017095	-	84	43.478
ENSKMAG00000000539	-	64	45.217	ENSKMAG00000000795	-	99	42.342
ENSKMAG00000000539	-	52	37.551	ENSKMAG00000000556	-	99	41.593
ENSKMAG00000000539	-	52	44.348	ENSKMAG00000006392	-	54	45.570
ENSKMAG00000000539	-	100	34.577	ENSKMAG00000010499	-	99	42.609
ENSKMAG00000000539	-	93	45.217	ENSKMAG00000011031	-	96	77.778
ENSKMAG00000000539	-	62	47.899	ENSKMAG00000005375	-	52	49.123
ENSKMAG00000000539	-	73	46.957	ENSKMAG00000016333	-	85	47.009
ENSKMAG00000000539	-	100	41.071	ENSKMAG00000004290	-	65	42.342
ENSKMAG00000000539	-	81	46.903	ENSKMAG00000000371	-	96	46.903
ENSKMAG00000000539	-	59	80.000	ENSKMAG00000000529	-	100	59.130
ENSKMAG00000000539	-	69	59.130	ENSKMAG00000000520	-	95	59.130
ENSKMAG00000000539	-	100	77.778	ENSKMAG00000010996	-	95	46.087
ENSKMAG00000000539	-	55	41.593	ENSKMAG00000001192	-	65	41.593
ENSKMAG00000000539	-	100	45.217	ENSKMAG00000018275	-	97	45.217
ENSKMAG00000000539	-	71	47.826	ENSKMAG00000002032	-	76	47.826
ENSKMAG00000000539	-	62	43.478	ENSKMAG00000000597	-	94	43.750
ENSKMAG00000000539	-	92	48.696	ENSKMAG00000021716	-	94	47.826
ENSKMAG00000000539	-	70	42.857	ENSKMAG00000001357	-	91	42.857
ENSKMAG00000000539	-	63	63.514	ENSKMAG00000000549	-	100	60.870
ENSKMAG00000000539	-	68	47.826	ENSKMAG00000006633	-	67	47.826
ENSKMAG00000000539	-	51	46.552	ENSKMAG00000007657	-	100	46.552

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000000539	-	98	43.478	ENSAOCG00000000463	-	95	43.478	Amphiprion_ocellaris
ENSKMAG00000000539	-	67	31.077	ENSCVAG00000003630	-	85	47.826	Cyprinodon_variegatus
ENSKMAG00000000539	-	100	40.909	ENSCVAG00000004508	-	56	43.590	Cyprinodon_variegatus
ENSKMAG00000000539	-	100	41.964	ENSFHEG00000018266	-	96	41.964	Fundulus_heteroclitus
ENSKMAG00000000539	-	100	41.593	ENSLBEG00000011006	-	65	41.772	Labrus_bergylta
ENSKMAG00000000539	-	100	44.928	ENSOMEG00000010906	-	66	68.627	Oryzias_melastigma
ENSKMAG00000000539	-	76	44.643	ENSPLAG00000009651	-	82	35.246	Poecilia_latipinna
ENSKMAG00000000539	-	100	39.823	ENSPREG00000004006	-	99	40.845	Poecilia_reticulata
ENSKMAG00000000539	-	100	46.957	ENSPREG00000018011	-	96	46.957	Poecilia_reticulata