EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000000543 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 8779 bases
Position: chrLWHD01000126.1:556254-565032
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000000724	zf-C2H2	PF00096.26	2.5e-44	1	7
ENSKMAP00000000724	zf-C2H2	PF00096.26	2.5e-44	2	7
ENSKMAP00000000724	zf-C2H2	PF00096.26	2.5e-44	3	7
ENSKMAP00000000724	zf-C2H2	PF00096.26	2.5e-44	4	7
ENSKMAP00000000724	zf-C2H2	PF00096.26	2.5e-44	5	7
ENSKMAP00000000724	zf-C2H2	PF00096.26	2.5e-44	6	7
ENSKMAP00000000724	zf-C2H2	PF00096.26	2.5e-44	7	7
ENSKMAP00000000800	zf-C2H2	PF00096.26	3.5e-44	1	7
ENSKMAP00000000800	zf-C2H2	PF00096.26	3.5e-44	2	7
ENSKMAP00000000800	zf-C2H2	PF00096.26	3.5e-44	3	7
ENSKMAP00000000800	zf-C2H2	PF00096.26	3.5e-44	4	7
ENSKMAP00000000800	zf-C2H2	PF00096.26	3.5e-44	5	7
ENSKMAP00000000800	zf-C2H2	PF00096.26	3.5e-44	6	7
ENSKMAP00000000800	zf-C2H2	PF00096.26	3.5e-44	7	7
ENSKMAP00000000701	zf-C2H2	PF00096.26	9.3e-35	1	6
ENSKMAP00000000701	zf-C2H2	PF00096.26	9.3e-35	2	6
ENSKMAP00000000701	zf-C2H2	PF00096.26	9.3e-35	3	6
ENSKMAP00000000701	zf-C2H2	PF00096.26	9.3e-35	4	6
ENSKMAP00000000701	zf-C2H2	PF00096.26	9.3e-35	5	6
ENSKMAP00000000701	zf-C2H2	PF00096.26	9.3e-35	6	6
ENSKMAP00000000724	zf-met	PF12874.7	2.5e-12	1	1
ENSKMAP00000000800	zf-met	PF12874.7	2.6e-12	1	1
ENSKMAP00000000701	zf-met	PF12874.7	5.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000000731	-	1221	-	ENSKMAP00000000701	406 (aa)	-	-
ENSKMAT00000000830	-	1404	-	ENSKMAP00000000800	467 (aa)	-	-
ENSKMAT00000000754	-	1227	-	ENSKMAP00000000724	408 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000000543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000000543's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000000543	-	98	46.134	ENSKMAG00000019130	-	99	46.547
ENSKMAG00000000543	-	97	43.653	ENSKMAG00000008316	-	84	48.387
ENSKMAG00000000543	-	98	36.194	ENSKMAG00000008319	-	89	34.302
ENSKMAG00000000543	-	98	45.968	ENSKMAG00000002606	-	91	45.968
ENSKMAG00000000543	-	94	40.777	ENSKMAG00000021206	snai1a	51	41.053
ENSKMAG00000000543	-	95	45.045	ENSKMAG00000018266	-	93	45.045
ENSKMAG00000000543	-	89	41.584	ENSKMAG00000019828	-	79	40.777
ENSKMAG00000000543	-	96	37.000	ENSKMAG00000007658	-	91	36.047
ENSKMAG00000000543	-	99	46.552	ENSKMAG00000007657	-	72	44.898
ENSKMAG00000000543	-	99	40.893	ENSKMAG00000000688	-	99	39.313
ENSKMAG00000000543	-	83	49.020	ENSKMAG00000006686	znf341	55	34.653
ENSKMAG00000000543	-	99	44.785	ENSKMAG00000003766	-	97	44.785
ENSKMAG00000000543	-	97	48.980	ENSKMAG00000002501	sall4	63	41.509
ENSKMAG00000000543	-	94	53.125	ENSKMAG00000002583	-	97	48.649
ENSKMAG00000000543	-	98	44.086	ENSKMAG00000000520	-	76	42.857
ENSKMAG00000000543	-	96	44.348	ENSKMAG00000000529	-	85	44.348
ENSKMAG00000000543	-	99	48.000	ENSKMAG00000019180	-	69	51.389
ENSKMAG00000000543	-	97	35.246	ENSKMAG00000009015	-	95	38.610
ENSKMAG00000000543	-	99	44.767	ENSKMAG00000018648	-	90	43.580
ENSKMAG00000000543	-	100	44.282	ENSKMAG00000011031	-	74	42.636
ENSKMAG00000000543	-	90	41.497	ENSKMAG00000016047	gfi1b	53	42.735
ENSKMAG00000000543	-	95	36.585	ENSKMAG00000011202	-	56	38.095
ENSKMAG00000000543	-	97	44.348	ENSKMAG00000009979	-	92	41.339
ENSKMAG00000000543	-	97	42.671	ENSKMAG00000021874	-	86	42.671
ENSKMAG00000000543	-	100	41.288	ENSKMAG00000018636	-	94	41.406
ENSKMAG00000000543	-	95	49.500	ENSKMAG00000014939	-	70	44.751
ENSKMAG00000000543	-	96	33.425	ENSKMAG00000010133	znf526	89	32.641
ENSKMAG00000000543	-	95	39.631	ENSKMAG00000010330	zbtb47b	78	39.631
ENSKMAG00000000543	-	96	35.714	ENSKMAG00000016588	-	71	33.427
ENSKMAG00000000543	-	98	46.358	ENSKMAG00000016333	-	97	44.444
ENSKMAG00000000543	-	100	44.192	ENSKMAG00000010996	-	75	45.525
ENSKMAG00000000543	-	96	42.857	ENSKMAG00000000371	-	98	44.286
ENSKMAG00000000543	-	95	50.746	ENSKMAG00000003203	-	87	51.515
ENSKMAG00000000543	-	99	42.629	ENSKMAG00000006392	-	83	37.306
ENSKMAG00000000543	-	91	48.571	ENSKMAG00000007672	-	61	50.000
ENSKMAG00000000543	-	91	47.945	ENSKMAG00000003176	-	98	47.945
ENSKMAG00000000543	-	93	42.910	ENSKMAG00000006450	-	98	36.609
ENSKMAG00000000543	-	94	37.121	ENSKMAG00000009489	-	55	40.000
ENSKMAG00000000543	-	95	46.196	ENSKMAG00000020046	-	72	45.622
ENSKMAG00000000543	-	93	47.196	ENSKMAG00000013843	-	88	47.196
ENSKMAG00000000543	-	100	50.965	ENSKMAG00000000462	-	99	47.368
ENSKMAG00000000543	-	94	39.355	ENSKMAG00000009522	-	61	41.250
ENSKMAG00000000543	-	98	57.736	ENSKMAG00000000668	-	97	57.736
ENSKMAG00000000543	-	100	35.531	ENSKMAG00000001084	-	89	48.193
ENSKMAG00000000543	-	94	36.257	ENSKMAG00000001186	-	56	40.385
ENSKMAG00000000543	-	98	45.455	ENSKMAG00000021716	-	91	35.429
ENSKMAG00000000543	-	100	44.179	ENSKMAG00000011111	-	99	45.040
ENSKMAG00000000543	-	94	53.237	ENSKMAG00000000795	-	99	52.500
ENSKMAG00000000543	-	98	41.141	ENSKMAG00000002022	-	95	39.259
ENSKMAG00000000543	-	94	44.912	ENSKMAG00000009648	-	89	43.373
ENSKMAG00000000543	-	94	37.121	ENSKMAG00000005484	scrt1b	69	35.714
ENSKMAG00000000543	-	96	44.681	ENSKMAG00000014629	-	96	43.011
ENSKMAG00000000543	-	98	42.455	ENSKMAG00000000718	-	99	42.455
ENSKMAG00000000543	-	98	37.306	ENSKMAG00000021184	-	91	37.438
ENSKMAG00000000543	-	97	40.711	ENSKMAG00000013745	-	82	45.588
ENSKMAG00000000543	-	93	42.754	ENSKMAG00000013290	-	93	47.600
ENSKMAG00000000543	-	94	42.437	ENSKMAG00000003121	-	89	42.373
ENSKMAG00000000543	-	85	36.364	ENSKMAG00000006327	si:ch211-216l23.1	94	36.364
ENSKMAG00000000543	-	99	47.500	ENSKMAG00000003940	-	99	47.451
ENSKMAG00000000543	-	94	32.453	ENSKMAG00000020467	si:dkey-208k4.2	85	35.681
ENSKMAG00000000543	-	99	33.813	ENSKMAG00000011982	znf646	90	36.585
ENSKMAG00000000543	-	99	46.610	ENSKMAG00000015304	-	73	46.610
ENSKMAG00000000543	-	94	45.455	ENSKMAG00000000802	-	84	48.361
ENSKMAG00000000543	-	94	37.134	ENSKMAG00000013663	prdm5	81	38.760
ENSKMAG00000000543	-	98	47.183	ENSKMAG00000012202	-	86	45.098
ENSKMAG00000000543	-	100	40.822	ENSKMAG00000001996	-	93	42.007
ENSKMAG00000000543	-	99	43.750	ENSKMAG00000006231	-	94	45.455
ENSKMAG00000000543	-	100	39.759	ENSKMAG00000012909	-	95	36.296
ENSKMAG00000000543	-	98	41.593	ENSKMAG00000007922	-	82	41.593
ENSKMAG00000000543	-	93	38.835	ENSKMAG00000018546	-	76	38.835
ENSKMAG00000000543	-	97	38.764	ENSKMAG00000000556	-	69	39.024
ENSKMAG00000000543	-	94	39.252	ENSKMAG00000007892	-	90	42.056
ENSKMAG00000000543	-	95	42.478	ENSKMAG00000014002	si:ch211-79k12.2	82	43.820
ENSKMAG00000000543	-	93	36.333	ENSKMAG00000020339	-	89	42.609
ENSKMAG00000000543	-	94	36.170	ENSKMAG00000008157	patz1	50	32.819
ENSKMAG00000000543	-	98	35.124	ENSKMAG00000007699	-	75	36.000
ENSKMAG00000000543	-	99	36.952	ENSKMAG00000020025	-	94	45.082
ENSKMAG00000000543	-	94	48.246	ENSKMAG00000013863	-	94	43.548
ENSKMAG00000000543	-	96	35.758	ENSKMAG00000012934	-	92	38.745
ENSKMAG00000000543	-	96	34.835	ENSKMAG00000011850	-	53	36.882
ENSKMAG00000000543	-	100	38.023	ENSKMAG00000011441	-	81	36.364
ENSKMAG00000000543	-	98	42.500	ENSKMAG00000019912	-	95	36.765
ENSKMAG00000000543	-	96	35.821	ENSKMAG00000005164	snai2	78	34.559
ENSKMAG00000000543	-	94	42.803	ENSKMAG00000005375	-	77	43.519
ENSKMAG00000000543	-	94	45.714	ENSKMAG00000018275	-	59	45.714
ENSKMAG00000000543	-	95	50.000	ENSKMAG00000003846	sall3a	51	52.000
ENSKMAG00000000543	-	95	45.429	ENSKMAG00000006773	-	96	45.387
ENSKMAG00000000543	-	100	44.934	ENSKMAG00000001091	-	78	44.105
ENSKMAG00000000543	-	99	45.645	ENSKMAG00000005747	-	96	43.750
ENSKMAG00000000543	-	96	46.063	ENSKMAG00000006633	-	84	43.056
ENSKMAG00000000543	-	98	39.161	ENSKMAG00000001192	-	86	43.005
ENSKMAG00000000543	-	95	41.860	ENSKMAG00000001190	-	96	50.000
ENSKMAG00000000543	-	84	34.821	ENSKMAG00000008905	hinfp	52	34.821
ENSKMAG00000000543	-	99	35.054	ENSKMAG00000007249	znf319b	85	36.940
ENSKMAG00000000543	-	94	46.512	ENSKMAG00000017443	-	100	47.191
ENSKMAG00000000543	-	98	47.222	ENSKMAG00000002032	-	69	46.309
ENSKMAG00000000543	-	94	37.363	ENSKMAG00000004290	-	80	37.363
ENSKMAG00000000543	-	99	49.533	ENSKMAG00000000689	-	98	51.982
ENSKMAG00000000543	-	96	37.952	ENSKMAG00000000702	-	99	37.952
ENSKMAG00000000543	-	96	45.274	ENSKMAG00000018656	si:dkey-77f5.14	98	47.264
ENSKMAG00000000543	-	99	39.916	ENSKMAG00000021194	-	76	42.342
ENSKMAG00000000543	-	95	44.275	ENSKMAG00000017095	-	69	42.202
ENSKMAG00000000543	-	94	33.758	ENSKMAG00000017329	znf710b	54	40.179
ENSKMAG00000000543	-	100	47.552	ENSKMAG00000001357	-	73	47.552
ENSKMAG00000000543	-	88	31.855	ENSKMAG00000014184	-	62	33.036
ENSKMAG00000000543	-	97	37.419	ENSKMAG00000002963	zbtb48	55	42.697
ENSKMAG00000000543	-	94	45.679	ENSKMAG00000017903	-	58	44.304
ENSKMAG00000000543	-	94	41.379	ENSKMAG00000000620	-	88	34.965
ENSKMAG00000000543	-	92	49.727	ENSKMAG00000014923	-	75	37.960
ENSKMAG00000000543	-	100	46.561	ENSKMAG00000010499	-	59	46.561
ENSKMAG00000000543	-	99	44.583	ENSKMAG00000003186	-	83	47.826
ENSKMAG00000000543	-	96	45.968	ENSKMAG00000009563	-	87	45.968
ENSKMAG00000000543	-	94	36.364	ENSKMAG00000018087	scrt2	57	34.074
ENSKMAG00000000543	-	90	45.536	ENSKMAG00000000549	-	77	41.290
ENSKMAG00000000543	-	87	32.787	ENSKMAG00000014037	si:dkey-89b17.4	64	32.432
ENSKMAG00000000543	-	94	46.047	ENSKMAG00000010903	-	77	46.667
ENSKMAG00000000543	-	97	41.704	ENSKMAG00000000387	-	60	44.167
ENSKMAG00000000543	-	98	43.243	ENSKMAG00000006563	-	72	42.991
ENSKMAG00000000543	-	96	46.410	ENSKMAG00000008262	-	79	45.914
ENSKMAG00000000543	-	99	36.391	ENSKMAG00000001171	-	78	39.789
ENSKMAG00000000543	-	98	44.565	ENSKMAG00000002448	-	91	44.565
ENSKMAG00000000543	-	88	37.048	ENSKMAG00000004080	zbtb17	63	39.506
ENSKMAG00000000543	-	94	42.857	ENSKMAG00000009682	-	95	38.249
ENSKMAG00000000543	-	99	45.152	ENSKMAG00000000073	-	98	45.736
ENSKMAG00000000543	-	96	35.326	ENSKMAG00000004988	-	91	38.189
ENSKMAG00000000543	-	96	39.648	ENSKMAG00000003402	-	61	39.648
ENSKMAG00000000543	-	99	45.000	ENSKMAG00000021817	znf236	83	45.000
ENSKMAG00000000543	-	96	44.588	ENSKMAG00000002093	-	94	45.736
ENSKMAG00000000543	-	98	42.857	ENSKMAG00000000597	-	95	43.411

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000000543	-	94	45.872	ENSATEG00000010859	-	94	48.684	Anabas_testudineus
ENSKMAG00000000543	-	99	45.604	ENSAMXG00000031794	-	98	45.604	Astyanax_mexicanus
ENSKMAG00000000543	-	98	44.101	ENSAMXG00000029960	-	94	45.703	Astyanax_mexicanus
ENSKMAG00000000543	-	98	46.009	ENSAMXG00000039700	-	93	46.951	Astyanax_mexicanus
ENSKMAG00000000543	-	100	45.017	ENSAMXG00000013274	-	92	45.017	Astyanax_mexicanus
ENSKMAG00000000543	-	95	45.574	ENSAMXG00000042593	-	97	47.860	Astyanax_mexicanus
ENSKMAG00000000543	-	99	43.598	ENSAMXG00000042633	-	96	42.373	Astyanax_mexicanus
ENSKMAG00000000543	-	95	44.720	ENSAMXG00000039977	-	93	44.286	Astyanax_mexicanus
ENSKMAG00000000543	-	99	44.807	ENSAMXG00000039432	-	97	44.807	Astyanax_mexicanus
ENSKMAG00000000543	-	99	44.340	ENSCPBG00000009849	-	83	51.000	Chrysemys_picta_bellii
ENSKMAG00000000543	-	100	46.552	ENSELUG00000009575	-	99	45.490	Esox_lucius
ENSKMAG00000000543	-	98	42.708	ENSIPUG00000015121	-	84	43.359	Ictalurus_punctatus
ENSKMAG00000000543	-	95	39.297	ENSMAMG00000016519	-	86	43.750	Mastacembelus_armatus
ENSKMAG00000000543	-	98	38.259	ENSMZEG00005020574	-	88	39.617	Maylandia_zebra
ENSKMAG00000000543	-	98	35.096	ENSONIG00000007088	-	100	39.056	Oreochromis_niloticus
ENSKMAG00000000543	-	99	46.599	ENSPSIG00000000075	-	77	46.599	Pelodiscus_sinensis
ENSKMAG00000000543	-	98	44.048	ENSPNAG00000008480	-	89	46.484	Pygocentrus_nattereri
ENSKMAG00000000543	-	99	43.662	ENSPNAG00000012215	-	94	43.348	Pygocentrus_nattereri
ENSKMAG00000000543	-	95	37.629	ENSSMAG00000007396	-	80	45.098	Scophthalmus_maximus
ENSKMAG00000000543	-	99	46.624	ENSTBEG00000012287	-	99	58.974	Tupaia_belangeri