EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000001068 (Gene tree)
Gene ID: 108231123
Gene Symbol: cstf2
Alias: CstF-64|fb11e07|wu:fb11e07|zgc:77730
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 10491 bases
Position: chrLWHD01000011.1:2582480-2592970
Accession: 108231123
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000001334	RRM_1	PF00076.22	1.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000001373	-	1907	XM_017408004	ENSKMAP00000001334	491 (aa)	XP_017263493	UPI0007F8DC4A

Gene Model

Click here to download ENSKMAG00000001068's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000001068's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000001068	cstf2	96	59.722	ENSG00000101811	CSTF2	81	91.758	Homo_sapiens
ENSKMAG00000001068	cstf2	96	89.167	ENSAPOG00000005630	cstf2	100	87.375	Acanthochromis_polyacanthus
ENSKMAG00000001068	cstf2	96	56.672	ENSAMEG00000002082	CSTF2	84	80.658	Ailuropoda_melanoleuca
ENSKMAG00000001068	cstf2	96	84.551	ENSACIG00000012852	cstf2	100	82.530	Amphilophus_citrinellus
ENSKMAG00000001068	cstf2	100	88.956	ENSAOCG00000020905	cstf2	100	88.153	Amphiprion_ocellaris
ENSKMAG00000001068	cstf2	100	89.157	ENSAPEG00000006526	cstf2	100	88.153	Amphiprion_percula
ENSKMAG00000001068	cstf2	100	88.283	ENSATEG00000018186	cstf2	100	87.273	Anabas_testudineus
ENSKMAG00000001068	cstf2	93	58.163	ENSAPLG00000007255	CSTF2	82	84.914	Anas_platyrhynchos
ENSKMAG00000001068	cstf2	96	75.261	ENSANAG00000022342	CSTF2	80	81.743	Aotus_nancymaae
ENSKMAG00000001068	cstf2	100	85.915	ENSACLG00000000779	cstf2	96	85.513	Astatotilapia_calliptera
ENSKMAG00000001068	cstf2	89	89.565	ENSAMXG00000021477	cstf2	79	89.520	Astyanax_mexicanus
ENSKMAG00000001068	cstf2	96	59.790	ENSBTAG00000003547	CSTF2	84	80.000	Bos_taurus
ENSKMAG00000001068	cstf2	96	62.069	ENSCJAG00000004422	CSTF2	52	81.743	Callithrix_jacchus
ENSKMAG00000001068	cstf2	96	59.529	ENSCAFG00020007619	CSTF2	84	80.658	Canis_lupus_dingo
ENSKMAG00000001068	cstf2	96	59.965	ENSCHIG00000016994	CSTF2	84	80.000	Capra_hircus
ENSKMAG00000001068	cstf2	97	58.864	ENSCPOG00000015255	CSTF2	84	92.157	Cavia_porcellus
ENSKMAG00000001068	cstf2	96	61.957	ENSCCAG00000032975	CSTF2	99	58.984	Cebus_capucinus
ENSKMAG00000001068	cstf2	96	62.138	ENSCATG00000022835	CSTF2	99	59.347	Cercocebus_atys
ENSKMAG00000001068	cstf2	96	59.028	ENSCLAG00000001904	CSTF2	85	90.385	Chinchilla_lanigera
ENSKMAG00000001068	cstf2	97	68.765	ENSCPBG00000014293	CSTF2	65	85.306	Chrysemys_picta_bellii
ENSKMAG00000001068	cstf2	96	62.138	ENSCANG00000030612	CSTF2	99	59.347	Colobus_angolensis_palliatus
ENSKMAG00000001068	cstf2	96	57.627	ENSCGRG00001023023	Cstf2	87	81.328	Cricetulus_griseus_chok1gshd
ENSKMAG00000001068	cstf2	96	60.245	ENSCGRG00000003897	Cstf2	86	80.913	Cricetulus_griseus_crigri
ENSKMAG00000001068	cstf2	96	91.314	ENSCVAG00000005731	cstf2	100	89.613	Cyprinodon_variegatus
ENSKMAG00000001068	cstf2	95	71.111	ENSDARG00000090788	cstf2	73	85.897	Danio_rerio
ENSKMAG00000001068	cstf2	96	59.240	ENSDORG00000007195	Cstf2	83	92.715	Dipodomys_ordii
ENSKMAG00000001068	cstf2	97	56.106	ENSEASG00005001216	CSTF2	84	80.658	Equus_asinus_asinus
ENSKMAG00000001068	cstf2	97	57.338	ENSECAG00000009325	CSTF2	84	80.658	Equus_caballus
ENSKMAG00000001068	cstf2	96	59.208	ENSFCAG00000007000	CSTF2	84	80.816	Felis_catus
ENSKMAG00000001068	cstf2	88	55.965	ENSFALG00000003859	CSTF2	84	81.905	Ficedula_albicollis
ENSKMAG00000001068	cstf2	96	59.036	ENSFDAG00000002416	CSTF2	80	81.743	Fukomys_damarensis
ENSKMAG00000001068	cstf2	95	88.819	ENSFHEG00000017065	cstf2	92	87.526	Fundulus_heteroclitus
ENSKMAG00000001068	cstf2	96	73.958	ENSGMOG00000005145	cstf2	99	72.141	Gadus_morhua
ENSKMAG00000001068	cstf2	97	63.189	ENSGALG00000006760	CSTF2	52	85.020	Gallus_gallus
ENSKMAG00000001068	cstf2	96	86.392	ENSGAFG00000020027	cstf2	100	83.929	Gambusia_affinis
ENSKMAG00000001068	cstf2	97	74.269	ENSGACG00000017326	cstf2	98	67.010	Gasterosteus_aculeatus
ENSKMAG00000001068	cstf2	97	58.852	ENSGAGG00000006037	CSTF2	66	84.739	Gopherus_agassizii
ENSKMAG00000001068	cstf2	96	62.319	ENSGGOG00000022267	CSTF2	99	59.347	Gorilla_gorilla
ENSKMAG00000001068	cstf2	100	85.972	ENSHBUG00000016183	cstf2	96	85.571	Haplochromis_burtoni
ENSKMAG00000001068	cstf2	96	59.036	ENSHGLG00000000659	-	86	88.889	Heterocephalus_glaber_female
ENSKMAG00000001068	cstf2	96	59.036	ENSHGLG00100001130	-	86	88.889	Heterocephalus_glaber_male
ENSKMAG00000001068	cstf2	96	82.195	ENSHCOG00000005157	cstf2	100	80.838	Hippocampus_comes
ENSKMAG00000001068	cstf2	98	69.962	ENSIPUG00000017839	cstf2	50	86.973	Ictalurus_punctatus
ENSKMAG00000001068	cstf2	97	59.826	ENSSTOG00000023445	CSTF2	85	90.385	Ictidomys_tridecemlineatus
ENSKMAG00000001068	cstf2	96	59.028	ENSJJAG00000020507	Cstf2	85	90.385	Jaculus_jaculus
ENSKMAG00000001068	cstf2	67	91.139	ENSLBEG00000028720	cstf2	95	91.139	Labrus_bergylta
ENSKMAG00000001068	cstf2	97	60.067	ENSLACG00000015927	CSTF2	85	86.364	Latimeria_chalumnae
ENSKMAG00000001068	cstf2	96	83.824	ENSLOCG00000015300	cstf2	71	87.654	Lepisosteus_oculatus
ENSKMAG00000001068	cstf2	96	59.337	ENSLAFG00000000474	CSTF2	84	82.158	Loxodonta_africana
ENSKMAG00000001068	cstf2	96	62.138	ENSMFAG00000043888	CSTF2	99	59.347	Macaca_fascicularis
ENSKMAG00000001068	cstf2	96	62.138	ENSMMUG00000013008	CSTF2	99	59.347	Macaca_mulatta
ENSKMAG00000001068	cstf2	96	62.138	ENSMNEG00000041824	CSTF2	99	59.347	Macaca_nemestrina
ENSKMAG00000001068	cstf2	96	62.138	ENSMLEG00000036870	CSTF2	99	59.347	Mandrillus_leucophaeus
ENSKMAG00000001068	cstf2	94	88.462	ENSMAMG00000020364	cstf2	96	86.752	Mastacembelus_armatus
ENSKMAG00000001068	cstf2	100	85.915	ENSMZEG00005007200	cstf2	100	85.513	Maylandia_zebra
ENSKMAG00000001068	cstf2	96	57.022	ENSMAUG00000000965	Cstf2	87	81.328	Mesocricetus_auratus
ENSKMAG00000001068	cstf2	96	61.189	ENSMICG00000014121	CSTF2	80	81.224	Microcebus_murinus
ENSKMAG00000001068	cstf2	96	57.751	ENSMOCG00000008081	Cstf2	86	80.913	Microtus_ochrogaster
ENSKMAG00000001068	cstf2	100	73.161	ENSMMOG00000000538	cstf2	100	73.092	Mola_mola
ENSKMAG00000001068	cstf2	96	59.469	MGP_CAROLIEiJ_G0033383	Cstf2	85	91.026	Mus_caroli
ENSKMAG00000001068	cstf2	96	58.938	ENSMUSG00000031256	Cstf2	85	91.026	Mus_musculus
ENSKMAG00000001068	cstf2	96	61.441	MGP_PahariEiJ_G0031923	Cstf2	87	81.893	Mus_pahari
ENSKMAG00000001068	cstf2	96	58.938	MGP_SPRETEiJ_G0034548	Cstf2	85	91.026	Mus_spretus
ENSKMAG00000001068	cstf2	96	54.961	ENSMPUG00000002339	CSTF2	80	80.658	Mustela_putorius_furo
ENSKMAG00000001068	cstf2	96	54.101	ENSMLUG00000004598	CSTF2	78	80.816	Myotis_lucifugus
ENSKMAG00000001068	cstf2	96	59.208	ENSNGAG00000021985	Cstf2	87	81.070	Nannospalax_galili
ENSKMAG00000001068	cstf2	92	76.972	ENSNBRG00000021694	cstf2	100	75.906	Neolamprologus_brichardi
ENSKMAG00000001068	cstf2	96	62.138	ENSNLEG00000007510	CSTF2	99	59.347	Nomascus_leucogenys
ENSKMAG00000001068	cstf2	59	76.289	ENSOPRG00000003106	CSTF2	78	76.289	Ochotona_princeps
ENSKMAG00000001068	cstf2	90	92.308	ENSONIG00000002631	cstf2	81	91.165	Oreochromis_niloticus
ENSKMAG00000001068	cstf2	96	86.402	ENSORLG00000001380	cstf2	100	83.903	Oryzias_latipes
ENSKMAG00000001068	cstf2	96	86.402	ENSORLG00020021917	cstf2	100	83.903	Oryzias_latipes_hni
ENSKMAG00000001068	cstf2	96	86.402	ENSORLG00015011996	cstf2	100	83.903	Oryzias_latipes_hsok
ENSKMAG00000001068	cstf2	100	87.324	ENSOMEG00000015507	cstf2	100	87.123	Oryzias_melastigma
ENSKMAG00000001068	cstf2	96	59.743	ENSOGAG00000011192	CSTF2	80	80.328	Otolemur_garnettii
ENSKMAG00000001068	cstf2	96	59.965	ENSOARG00000001022	CSTF2	84	80.000	Ovis_aries
ENSKMAG00000001068	cstf2	96	62.319	ENSPPAG00000031804	CSTF2	99	59.347	Pan_paniscus
ENSKMAG00000001068	cstf2	96	59.208	ENSPPRG00000022492	CSTF2	84	80.816	Panthera_pardus
ENSKMAG00000001068	cstf2	96	58.864	ENSPTIG00000009922	CSTF2	84	80.000	Panthera_tigris_altaica
ENSKMAG00000001068	cstf2	96	62.319	ENSPTRG00000022090	CSTF2	99	59.347	Pan_troglodytes
ENSKMAG00000001068	cstf2	96	62.138	ENSPANG00000002303	CSTF2	80	81.743	Papio_anubis
ENSKMAG00000001068	cstf2	98	73.653	ENSPKIG00000005033	cstf2	95	72.441	Paramormyrops_kingsleyae
ENSKMAG00000001068	cstf2	96	86.639	ENSPMGG00000006534	cstf2	100	84.770	Periophthalmus_magnuspinnatus
ENSKMAG00000001068	cstf2	96	57.095	ENSPEMG00000019415	Cstf2	87	81.328	Peromyscus_maniculatus_bairdii
ENSKMAG00000001068	cstf2	96	85.253	ENSPLAG00000011176	cstf2	100	82.685	Poecilia_latipinna
ENSKMAG00000001068	cstf2	96	84.848	ENSPMEG00000017743	cstf2	100	82.296	Poecilia_mexicana
ENSKMAG00000001068	cstf2	65	83.533	ENSPREG00000011481	cstf2	100	76.208	Poecilia_reticulata
ENSKMAG00000001068	cstf2	97	59.858	ENSPCOG00000027744	CSTF2	99	59.273	Propithecus_coquereli
ENSKMAG00000001068	cstf2	93	47.865	ENSPVAG00000008342	CSTF2	87	54.741	Pteropus_vampyrus
ENSKMAG00000001068	cstf2	58	88.043	ENSPNYG00000010852	cstf2	100	88.043	Pundamilia_nyererei
ENSKMAG00000001068	cstf2	96	72.549	ENSPNAG00000018887	cstf2	50	87.597	Pygocentrus_nattereri
ENSKMAG00000001068	cstf2	96	58.262	ENSRNOG00000048025	Cstf2	87	81.893	Rattus_norvegicus
ENSKMAG00000001068	cstf2	97	61.913	ENSRBIG00000030745	CSTF2	99	59.489	Rhinopithecus_bieti
ENSKMAG00000001068	cstf2	96	62.138	ENSRROG00000045042	CSTF2	99	59.347	Rhinopithecus_roxellana
ENSKMAG00000001068	cstf2	95	76.241	ENSSBOG00000021649	CSTF2	80	81.743	Saimiri_boliviensis_boliviensis
ENSKMAG00000001068	cstf2	96	74.902	ENSSFOG00015006348	cstf2	50	86.590	Scleropages_formosus
ENSKMAG00000001068	cstf2	100	84.739	ENSSMAG00000013463	cstf2	100	84.940	Scophthalmus_maximus
ENSKMAG00000001068	cstf2	97	61.508	ENSSPUG00000005288	-	52	86.008	Sphenodon_punctatus
ENSKMAG00000001068	cstf2	96	60.159	ENSSSCG00000012486	CSTF2	84	79.592	Sus_scrofa
ENSKMAG00000001068	cstf2	97	59.799	ENSTGUG00000002253	CSTF2	87	84.337	Taeniopygia_guttata
ENSKMAG00000001068	cstf2	53	98.780	ENSTBEG00000010029	-	62	98.780	Tupaia_belangeri
ENSKMAG00000001068	cstf2	96	59.315	ENSUAMG00000026605	CSTF2	84	80.658	Ursus_americanus
ENSKMAG00000001068	cstf2	97	62.613	ENSUMAG00000012417	CSTF2	83	80.247	Ursus_maritimus
ENSKMAG00000001068	cstf2	76	68.955	ENSVPAG00000006466	CSTF2	50	78.367	Vicugna_pacos
ENSKMAG00000001068	cstf2	96	69.905	ENSXCOG00000016436	cstf2	75	94.118	Xiphophorus_couchianus
ENSKMAG00000001068	cstf2	65	88.438	ENSXMAG00000013524	cstf2	100	80.112	Xiphophorus_maculatus