EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000001139 (Gene tree)
Gene ID: 108231323
Gene Symbol: arl13a
Alias: zgc:73398
Full Name: ADP ribosylation factor like GTPase 13A
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 5041 bases
Position: chrLWHD01000011.1:2616295-2621335
Accession: 108231323
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000001438	MMR_HSR1	PF01926.23	5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000001478	-	1664	XM_017408291	ENSKMAP00000001438	443 (aa)	XP_017263780	UPI0007F8DB65

Gene Model

Click here to download ENSKMAG00000001139's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000001139's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000001139	arl13a	50	47.964	ENSKMAG00000001122	arl13b	69	43.056

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000001139	arl13a	94	74.580	ENSACIG00000012235	arl13a	100	71.190	Amphilophus_citrinellus
ENSKMAG00000001139	arl13a	94	75.837	ENSAOCG00000024309	arl13a	96	75.837	Amphiprion_ocellaris
ENSKMAG00000001139	arl13a	99	78.104	ENSAPEG00000006626	arl13a	100	78.104	Amphiprion_percula
ENSKMAG00000001139	arl13a	99	75.901	ENSATEG00000018113	arl13a	100	75.676	Anabas_testudineus
ENSKMAG00000001139	arl13a	94	74.699	ENSACLG00000000738	arl13a	100	74.458	Astatotilapia_calliptera
ENSKMAG00000001139	arl13a	93	57.971	ENSAMXG00000021495	arl13a	98	57.971	Astyanax_mexicanus
ENSKMAG00000001139	arl13a	94	58.865	ENSCSEG00000002533	arl13a	100	59.338	Cynoglossus_semilaevis
ENSKMAG00000001139	arl13a	99	77.878	ENSCVAG00000005783	arl13a	99	77.878	Cyprinodon_variegatus
ENSKMAG00000001139	arl13a	99	62.217	ENSDARG00000052575	arl13a	99	62.217	Danio_rerio
ENSKMAG00000001139	arl13a	99	77.703	ENSFHEG00000017023	arl13a	99	78.604	Fundulus_heteroclitus
ENSKMAG00000001139	arl13a	99	76.072	ENSGAFG00000019994	arl13a	99	76.072	Gambusia_affinis
ENSKMAG00000001139	arl13a	94	69.544	ENSGACG00000017318	arl13a	99	69.976	Gasterosteus_aculeatus
ENSKMAG00000001139	arl13a	99	76.975	ENSHBUG00000016100	arl13a	100	76.749	Haplochromis_burtoni
ENSKMAG00000001139	arl13a	94	66.746	ENSHCOG00000005206	arl13a	100	66.508	Hippocampus_comes
ENSKMAG00000001139	arl13a	93	58.111	ENSIPUG00000017720	arl13a	99	58.413	Ictalurus_punctatus
ENSKMAG00000001139	arl13a	99	74.266	ENSLBEG00000028724	arl13a	99	74.266	Labrus_bergylta
ENSKMAG00000001139	arl13a	99	52.796	ENSLOCG00000015307	arl13a	100	52.125	Lepisosteus_oculatus
ENSKMAG00000001139	arl13a	94	70.000	ENSMAMG00000020385	arl13a	100	70.476	Mastacembelus_armatus
ENSKMAG00000001139	arl13a	99	76.975	ENSMZEG00005007052	arl13a	100	77.218	Maylandia_zebra
ENSKMAG00000001139	arl13a	93	68.510	ENSMMOG00000000880	arl13a	100	66.114	Mola_mola
ENSKMAG00000001139	arl13a	52	79.476	ENSMALG00000009029	arl13a	100	64.439	Monopterus_albus
ENSKMAG00000001139	arl13a	94	74.699	ENSNBRG00000021766	arl13a	100	74.699	Neolamprologus_brichardi
ENSKMAG00000001139	arl13a	93	78.125	ENSONIG00000002645	arl13a	100	78.125	Oreochromis_niloticus
ENSKMAG00000001139	arl13a	99	72.912	ENSORLG00000001425	arl13a	100	73.815	Oryzias_latipes
ENSKMAG00000001139	arl13a	99	72.460	ENSORLG00020021844	arl13a	100	73.363	Oryzias_latipes_hni
ENSKMAG00000001139	arl13a	99	72.686	ENSORLG00015011862	arl13a	100	74.101	Oryzias_latipes_hsok
ENSKMAG00000001139	arl13a	99	72.460	ENSOMEG00000015603	arl13a	100	73.363	Oryzias_melastigma
ENSKMAG00000001139	arl13a	99	54.084	ENSPKIG00000013558	arl13a	99	55.012	Paramormyrops_kingsleyae
ENSKMAG00000001139	arl13a	50	52.273	ENSPSIG00000003515	ARL13A	98	52.273	Pelodiscus_sinensis
ENSKMAG00000001139	arl13a	94	62.201	ENSPMGG00000017973	arl13a	99	61.722	Periophthalmus_magnuspinnatus
ENSKMAG00000001139	arl13a	99	76.749	ENSPFOG00000016707	arl13a	99	76.577	Poecilia_formosa
ENSKMAG00000001139	arl13a	94	70.602	ENSPLAG00000011307	arl13a	99	71.154	Poecilia_latipinna
ENSKMAG00000001139	arl13a	99	77.878	ENSPMEG00000017855	arl13a	99	78.378	Poecilia_mexicana
ENSKMAG00000001139	arl13a	99	76.749	ENSPREG00000011435	arl13a	99	77.252	Poecilia_reticulata
ENSKMAG00000001139	arl13a	94	74.458	ENSPNYG00000011485	arl13a	100	74.217	Pundamilia_nyererei
ENSKMAG00000001139	arl13a	93	58.993	ENSSFOG00015010065	arl13a	99	59.952	Scleropages_formosus
ENSKMAG00000001139	arl13a	94	71.292	ENSSMAG00000013557	arl13a	100	69.856	Scophthalmus_maximus
ENSKMAG00000001139	arl13a	94	67.952	ENSSDUG00000000933	arl13a	100	68.434	Seriola_dumerili
ENSKMAG00000001139	arl13a	99	75.395	ENSSLDG00000009973	arl13a	100	73.815	Seriola_lalandi_dorsalis
ENSKMAG00000001139	arl13a	87	78.553	ENSSPAG00000009109	arl13a	96	78.442	Stegastes_partitus
ENSKMAG00000001139	arl13a	93	71.671	ENSXCOG00000016270	arl13a	99	72.222	Xiphophorus_couchianus
ENSKMAG00000001139	arl13a	99	77.201	ENSXMAG00000013485	arl13a	99	77.703	Xiphophorus_maculatus