EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000001230 (Gene tree)
Gene ID: 108244453
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 6761 bases
Position: chrLWHD01000142.1:972977-979737
Accession: 108244453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000001539	RRM_1	PF00076.22	2.1e-26	1	2
ENSKMAP00000001539	RRM_1	PF00076.22	2.1e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000001582	-	1232	XM_017430672	ENSKMAP00000001539	308 (aa)	XP_017286161	UPI0007F91882

Gene Model

Click here to download ENSKMAG00000001230's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000001230's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000001230	trnau1apa	70	52.294	ENSKMAG00000010082	trnau1apb	95	44.377
ENSKMAG00000001230	trnau1apa	64	30.818	ENSKMAG00000008049	pabpc1b	61	30.818
ENSKMAG00000001230	trnau1apa	56	31.056	ENSKMAG00000013597	pabpc4	55	31.447

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000001230	trnau1apa	93	58.478	ENSG00000180098	TRNAU1AP	95	60.208	Homo_sapiens
ENSKMAG00000001230	trnau1apa	100	86.084	ENSAPOG00000007148	TRNAU1AP	100	85.065	Acanthochromis_polyacanthus
ENSKMAG00000001230	trnau1apa	93	58.478	ENSAMEG00000011367	TRNAU1AP	95	60.208	Ailuropoda_melanoleuca
ENSKMAG00000001230	trnau1apa	91	93.258	ENSACIG00000004161	trnau1apa	93	93.258	Amphilophus_citrinellus
ENSKMAG00000001230	trnau1apa	100	87.987	ENSAOCG00000008056	trnau1apa	100	85.714	Amphiprion_ocellaris
ENSKMAG00000001230	trnau1apa	100	87.987	ENSAPEG00000008868	trnau1apa	100	85.714	Amphiprion_percula
ENSKMAG00000001230	trnau1apa	100	84.494	ENSATEG00000012140	trnau1apa	100	84.494	Anabas_testudineus
ENSKMAG00000001230	trnau1apa	92	58.042	ENSAPLG00000002606	TRNAU1AP	99	60.140	Anas_platyrhynchos
ENSKMAG00000001230	trnau1apa	92	47.751	ENSACAG00000003995	-	94	50.173	Anolis_carolinensis
ENSKMAG00000001230	trnau1apa	69	38.889	ENSACAG00000004205	-	83	40.948	Anolis_carolinensis
ENSKMAG00000001230	trnau1apa	93	58.478	ENSANAG00000018976	TRNAU1AP	95	60.208	Aotus_nancymaae
ENSKMAG00000001230	trnau1apa	100	84.091	ENSACLG00000018515	trnau1apa	100	82.792	Astatotilapia_calliptera
ENSKMAG00000001230	trnau1apa	99	55.128	ENSAMXG00000013750	trnau1apa	97	55.128	Astyanax_mexicanus
ENSKMAG00000001230	trnau1apa	92	69.318	ENSAMXG00000029240	-	95	69.318	Astyanax_mexicanus
ENSKMAG00000001230	trnau1apa	93	58.131	ENSBTAG00000010393	TRNAU1AP	95	59.862	Bos_taurus
ENSKMAG00000001230	trnau1apa	93	58.478	ENSCJAG00000009717	TRNAU1AP	95	60.208	Callithrix_jacchus
ENSKMAG00000001230	trnau1apa	93	58.478	ENSCAFG00000011735	TRNAU1AP	95	60.208	Canis_familiaris
ENSKMAG00000001230	trnau1apa	93	58.478	ENSCAFG00020023584	TRNAU1AP	95	60.208	Canis_lupus_dingo
ENSKMAG00000001230	trnau1apa	93	58.131	ENSCHIG00000023215	TRNAU1AP	95	59.862	Capra_hircus
ENSKMAG00000001230	trnau1apa	93	58.478	ENSTSYG00000003506	TRNAU1AP	95	60.208	Carlito_syrichta
ENSKMAG00000001230	trnau1apa	93	58.478	ENSCPOG00000001925	TRNAU1AP	95	60.208	Cavia_porcellus
ENSKMAG00000001230	trnau1apa	93	58.478	ENSCCAG00000037506	TRNAU1AP	95	60.208	Cebus_capucinus
ENSKMAG00000001230	trnau1apa	93	58.131	ENSCATG00000044617	TRNAU1AP	95	59.862	Cercocebus_atys
ENSKMAG00000001230	trnau1apa	93	58.478	ENSCLAG00000008223	TRNAU1AP	95	60.208	Chinchilla_lanigera
ENSKMAG00000001230	trnau1apa	93	58.131	ENSCSAG00000001014	TRNAU1AP	95	59.862	Chlorocebus_sabaeus
ENSKMAG00000001230	trnau1apa	90	57.401	ENSCPBG00000000121	TRNAU1AP	96	59.286	Chrysemys_picta_bellii
ENSKMAG00000001230	trnau1apa	55	47.399	ENSCSAVG00000011781	-	89	47.647	Ciona_savignyi
ENSKMAG00000001230	trnau1apa	93	50.173	ENSCANG00000041949	TRNAU1AP	93	55.801	Colobus_angolensis_palliatus
ENSKMAG00000001230	trnau1apa	93	58.478	ENSCGRG00001004713	Trnau1ap	95	60.208	Cricetulus_griseus_chok1gshd
ENSKMAG00000001230	trnau1apa	93	58.478	ENSCGRG00000014532	Trnau1ap	95	60.208	Cricetulus_griseus_crigri
ENSKMAG00000001230	trnau1apa	100	88.889	ENSCSEG00000006663	trnau1apa	99	88.889	Cynoglossus_semilaevis
ENSKMAG00000001230	trnau1apa	99	85.948	ENSCVAG00000018069	trnau1apa	99	85.948	Cyprinodon_variegatus
ENSKMAG00000001230	trnau1apa	99	50.318	ENSDARG00000101323	trnau1apa	95	49.367	Danio_rerio
ENSKMAG00000001230	trnau1apa	93	58.478	ENSDNOG00000033009	TRNAU1AP	95	60.208	Dasypus_novemcinctus
ENSKMAG00000001230	trnau1apa	56	60.465	ENSDNOG00000047959	-	89	60.465	Dasypus_novemcinctus
ENSKMAG00000001230	trnau1apa	93	57.292	ENSDORG00000006349	Trnau1ap	97	62.343	Dipodomys_ordii
ENSKMAG00000001230	trnau1apa	93	35.061	FBgn0031607	CG15440	96	34.545	Drosophila_melanogaster
ENSKMAG00000001230	trnau1apa	79	56.911	ENSETEG00000012594	TRNAU1AP	94	58.943	Echinops_telfairi
ENSKMAG00000001230	trnau1apa	61	47.727	ENSEBUG00000006349	-	56	47.727	Eptatretus_burgeri
ENSKMAG00000001230	trnau1apa	93	58.478	ENSEASG00005010062	TRNAU1AP	90	67.123	Equus_asinus_asinus
ENSKMAG00000001230	trnau1apa	93	58.478	ENSECAG00000012980	TRNAU1AP	90	67.123	Equus_caballus
ENSKMAG00000001230	trnau1apa	93	79.545	ENSELUG00000022790	-	96	79.545	Esox_lucius
ENSKMAG00000001230	trnau1apa	100	70.645	ENSELUG00000017686	trnau1apa	100	72.669	Esox_lucius
ENSKMAG00000001230	trnau1apa	93	58.478	ENSFCAG00000013401	TRNAU1AP	95	60.208	Felis_catus
ENSKMAG00000001230	trnau1apa	90	56.835	ENSFALG00000001371	TRNAU1AP	96	60.791	Ficedula_albicollis
ENSKMAG00000001230	trnau1apa	93	58.478	ENSFDAG00000018599	TRNAU1AP	95	60.208	Fukomys_damarensis
ENSKMAG00000001230	trnau1apa	78	88.525	ENSFHEG00000018232	trnau1apa	89	84.047	Fundulus_heteroclitus
ENSKMAG00000001230	trnau1apa	100	65.176	ENSGMOG00000016508	trnau1apa	99	65.495	Gadus_morhua
ENSKMAG00000001230	trnau1apa	69	39.819	ENSGALG00000012721	C2H6orf52	90	40.304	Gallus_gallus
ENSKMAG00000001230	trnau1apa	93	56.401	ENSGALG00000001310	-	95	60.208	Gallus_gallus
ENSKMAG00000001230	trnau1apa	80	90.204	ENSGAFG00000004928	trnau1apa	99	87.833	Gambusia_affinis
ENSKMAG00000001230	trnau1apa	100	84.091	ENSGACG00000001443	trnau1apa	100	84.091	Gasterosteus_aculeatus
ENSKMAG00000001230	trnau1apa	90	57.401	ENSGAGG00000004940	TRNAU1AP	96	60.000	Gopherus_agassizii
ENSKMAG00000001230	trnau1apa	93	58.478	ENSGGOG00000003511	TRNAU1AP	95	60.208	Gorilla_gorilla
ENSKMAG00000001230	trnau1apa	100	94.815	ENSHBUG00000002510	trnau1apa	100	81.150	Haplochromis_burtoni
ENSKMAG00000001230	trnau1apa	93	58.478	ENSHGLG00000010380	TRNAU1AP	95	60.208	Heterocephalus_glaber_female
ENSKMAG00000001230	trnau1apa	93	56.747	ENSHGLG00100012699	TRNAU1AP	95	58.478	Heterocephalus_glaber_male
ENSKMAG00000001230	trnau1apa	99	72.756	ENSHCOG00000014770	trnau1apa	99	72.436	Hippocampus_comes
ENSKMAG00000001230	trnau1apa	93	58.478	ENSSTOG00000000079	TRNAU1AP	95	60.208	Ictidomys_tridecemlineatus
ENSKMAG00000001230	trnau1apa	93	58.478	ENSJJAG00000010128	Trnau1ap	95	60.208	Jaculus_jaculus
ENSKMAG00000001230	trnau1apa	100	78.302	ENSLBEG00000011683	trnau1apa	100	78.056	Labrus_bergylta
ENSKMAG00000001230	trnau1apa	94	51.712	ENSLACG00000005541	TRNAU1AP	95	53.082	Latimeria_chalumnae
ENSKMAG00000001230	trnau1apa	94	60.208	ENSLOCG00000004041	trnau1apa	96	59.862	Lepisosteus_oculatus
ENSKMAG00000001230	trnau1apa	93	58.824	ENSLAFG00000007628	TRNAU1AP	95	60.554	Loxodonta_africana
ENSKMAG00000001230	trnau1apa	93	58.131	ENSMFAG00000043751	TRNAU1AP	95	59.862	Macaca_fascicularis
ENSKMAG00000001230	trnau1apa	93	58.131	ENSMMUG00000006561	TRNAU1AP	95	59.862	Macaca_mulatta
ENSKMAG00000001230	trnau1apa	93	58.131	ENSMNEG00000044201	TRNAU1AP	95	59.862	Macaca_nemestrina
ENSKMAG00000001230	trnau1apa	93	58.131	ENSMLEG00000015649	TRNAU1AP	95	59.862	Mandrillus_leucophaeus
ENSKMAG00000001230	trnau1apa	99	84.566	ENSMAMG00000001247	trnau1apa	99	83.280	Mastacembelus_armatus
ENSKMAG00000001230	trnau1apa	100	84.091	ENSMZEG00005017722	trnau1apa	100	82.792	Maylandia_zebra
ENSKMAG00000001230	trnau1apa	91	58.156	ENSMGAG00000002105	TRNAU1AP	96	59.929	Meleagris_gallopavo
ENSKMAG00000001230	trnau1apa	93	58.478	ENSMICG00000008386	TRNAU1AP	95	60.208	Microcebus_murinus
ENSKMAG00000001230	trnau1apa	93	58.478	ENSMOCG00000011189	Trnau1ap	95	60.208	Microtus_ochrogaster
ENSKMAG00000001230	trnau1apa	100	70.833	ENSMMOG00000012107	trnau1apa	99	73.077	Mola_mola
ENSKMAG00000001230	trnau1apa	93	57.785	ENSMODG00000010927	TRNAU1AP	95	59.170	Monodelphis_domestica
ENSKMAG00000001230	trnau1apa	100	85.531	ENSMALG00000016778	trnau1apa	100	85.531	Monopterus_albus
ENSKMAG00000001230	trnau1apa	93	58.131	MGP_CAROLIEiJ_G0026563	Trnau1ap	92	63.291	Mus_caroli
ENSKMAG00000001230	trnau1apa	93	58.131	ENSMUSG00000028898	Trnau1ap	92	63.291	Mus_musculus
ENSKMAG00000001230	trnau1apa	93	58.131	MGP_PahariEiJ_G0028896	Trnau1ap	84	74.576	Mus_pahari
ENSKMAG00000001230	trnau1apa	93	58.131	MGP_SPRETEiJ_G0027544	Trnau1ap	92	63.291	Mus_spretus
ENSKMAG00000001230	trnau1apa	93	58.824	ENSMPUG00000015511	TRNAU1AP	95	60.554	Mustela_putorius_furo
ENSKMAG00000001230	trnau1apa	93	58.478	ENSMLUG00000012586	TRNAU1AP	95	60.208	Myotis_lucifugus
ENSKMAG00000001230	trnau1apa	93	58.333	ENSNGAG00000015881	Trnau1ap	95	59.375	Nannospalax_galili
ENSKMAG00000001230	trnau1apa	100	71.704	ENSNBRG00000001758	trnau1apa	99	70.418	Neolamprologus_brichardi
ENSKMAG00000001230	trnau1apa	93	59.170	ENSNLEG00000009822	TRNAU1AP	95	60.900	Nomascus_leucogenys
ENSKMAG00000001230	trnau1apa	91	57.447	ENSMEUG00000006117	TRNAU1AP	96	58.865	Notamacropus_eugenii
ENSKMAG00000001230	trnau1apa	52	62.069	ENSOPRG00000007084	-	58	62.069	Ochotona_princeps
ENSKMAG00000001230	trnau1apa	93	58.478	ENSODEG00000002970	TRNAU1AP	95	60.208	Octodon_degus
ENSKMAG00000001230	trnau1apa	80	86.235	ENSONIG00000004715	trnau1apa	97	84.615	Oreochromis_niloticus
ENSKMAG00000001230	trnau1apa	93	44.251	ENSOANG00000005325	-	95	45.862	Ornithorhynchus_anatinus
ENSKMAG00000001230	trnau1apa	93	57.093	ENSOCUG00000011704	-	95	58.824	Oryctolagus_cuniculus
ENSKMAG00000001230	trnau1apa	86	45.865	ENSOCUG00000006834	-	98	46.067	Oryctolagus_cuniculus
ENSKMAG00000001230	trnau1apa	93	48.789	ENSOCUG00000002353	-	95	48.789	Oryctolagus_cuniculus
ENSKMAG00000001230	trnau1apa	100	84.416	ENSORLG00000010428	trnau1apa	100	82.468	Oryzias_latipes
ENSKMAG00000001230	trnau1apa	100	84.416	ENSORLG00020000926	trnau1ap	100	82.468	Oryzias_latipes_hni
ENSKMAG00000001230	trnau1apa	100	84.416	ENSORLG00015009858	trnau1ap	100	82.468	Oryzias_latipes_hsok
ENSKMAG00000001230	trnau1apa	100	84.740	ENSOMEG00000007873	trnau1apa	100	83.117	Oryzias_melastigma
ENSKMAG00000001230	trnau1apa	93	58.478	ENSOGAG00000002274	TRNAU1AP	95	60.208	Otolemur_garnettii
ENSKMAG00000001230	trnau1apa	93	58.131	ENSOARG00000002843	TRNAU1AP	95	59.862	Ovis_aries
ENSKMAG00000001230	trnau1apa	93	58.478	ENSPPAG00000033927	TRNAU1AP	95	60.208	Pan_paniscus
ENSKMAG00000001230	trnau1apa	93	58.478	ENSPPRG00000004416	TRNAU1AP	95	60.208	Panthera_pardus
ENSKMAG00000001230	trnau1apa	93	58.478	ENSPTIG00000016677	TRNAU1AP	95	60.208	Panthera_tigris_altaica
ENSKMAG00000001230	trnau1apa	86	52.830	ENSPTRG00000000434	-	90	53.903	Pan_troglodytes
ENSKMAG00000001230	trnau1apa	93	58.131	ENSPANG00000016019	TRNAU1AP	95	59.862	Papio_anubis
ENSKMAG00000001230	trnau1apa	93	58.333	ENSPKIG00000015511	trnau1apa	93	57.986	Paramormyrops_kingsleyae
ENSKMAG00000001230	trnau1apa	92	79.545	ENSPKIG00000022205	-	94	79.545	Paramormyrops_kingsleyae
ENSKMAG00000001230	trnau1apa	90	58.123	ENSPSIG00000006864	TRNAU1AP	96	60.000	Pelodiscus_sinensis
ENSKMAG00000001230	trnau1apa	97	68.000	ENSPMGG00000023893	trnau1apa	98	66.775	Periophthalmus_magnuspinnatus
ENSKMAG00000001230	trnau1apa	93	58.131	ENSPEMG00000007877	Trnau1ap	95	59.862	Peromyscus_maniculatus_bairdii
ENSKMAG00000001230	trnau1apa	55	53.179	ENSPMAG00000000592	trnau1apa	95	53.179	Petromyzon_marinus
ENSKMAG00000001230	trnau1apa	74	51.528	ENSPMAG00000005934	trnau1apa	96	51.293	Petromyzon_marinus
ENSKMAG00000001230	trnau1apa	99	86.601	ENSPFOG00000008100	trnau1apa	99	86.601	Poecilia_formosa
ENSKMAG00000001230	trnau1apa	95	86.735	ENSPLAG00000010236	trnau1apa	99	86.735	Poecilia_latipinna
ENSKMAG00000001230	trnau1apa	99	84.590	ENSPMEG00000016387	trnau1apa	97	84.590	Poecilia_mexicana
ENSKMAG00000001230	trnau1apa	89	83.158	ENSPREG00000019821	trnau1apa	98	83.158	Poecilia_reticulata
ENSKMAG00000001230	trnau1apa	84	50.000	ENSPPYG00000001639	-	95	51.908	Pongo_abelii
ENSKMAG00000001230	trnau1apa	92	46.831	ENSPCOG00000023470	-	95	48.592	Propithecus_coquereli
ENSKMAG00000001230	trnau1apa	93	58.478	ENSPCOG00000027712	-	95	60.208	Propithecus_coquereli
ENSKMAG00000001230	trnau1apa	93	58.478	ENSPVAG00000017214	TRNAU1AP	95	60.208	Pteropus_vampyrus
ENSKMAG00000001230	trnau1apa	100	83.704	ENSPNYG00000010130	trnau1apa	99	83.077	Pundamilia_nyererei
ENSKMAG00000001230	trnau1apa	99	52.258	ENSPNAG00000024905	trnau1apa	97	52.751	Pygocentrus_nattereri
ENSKMAG00000001230	trnau1apa	77	59.833	ENSRNOG00000055344	Trnau1ap	77	61.925	Rattus_norvegicus
ENSKMAG00000001230	trnau1apa	93	58.478	ENSRBIG00000029083	TRNAU1AP	95	60.208	Rhinopithecus_bieti
ENSKMAG00000001230	trnau1apa	93	58.478	ENSRROG00000029128	TRNAU1AP	95	60.208	Rhinopithecus_roxellana
ENSKMAG00000001230	trnau1apa	93	58.478	ENSSBOG00000021299	TRNAU1AP	95	60.208	Saimiri_boliviensis_boliviensis
ENSKMAG00000001230	trnau1apa	93	57.785	ENSSHAG00000008108	TRNAU1AP	95	59.170	Sarcophilus_harrisii
ENSKMAG00000001230	trnau1apa	100	81.029	ENSSMAG00000020851	trnau1apa	100	82.315	Scophthalmus_maximus
ENSKMAG00000001230	trnau1apa	100	84.615	ENSSDUG00000011734	trnau1apa	100	83.654	Seriola_dumerili
ENSKMAG00000001230	trnau1apa	100	69.156	ENSSLDG00000012101	trnau1apa	99	66.558	Seriola_lalandi_dorsalis
ENSKMAG00000001230	trnau1apa	91	58.511	ENSSARG00000007536	TRNAU1AP	96	60.284	Sorex_araneus
ENSKMAG00000001230	trnau1apa	58	51.667	ENSSPUG00000010415	-	94	51.667	Sphenodon_punctatus
ENSKMAG00000001230	trnau1apa	93	54.861	ENSSPUG00000010400	-	95	56.944	Sphenodon_punctatus
ENSKMAG00000001230	trnau1apa	100	87.013	ENSSPAG00000005029	trnau1apa	100	86.039	Stegastes_partitus
ENSKMAG00000001230	trnau1apa	93	58.478	ENSSSCG00000030284	TRNAU1AP	95	60.208	Sus_scrofa
ENSKMAG00000001230	trnau1apa	91	58.511	ENSTGUG00000000735	-	96	60.284	Taeniopygia_guttata
ENSKMAG00000001230	trnau1apa	69	41.784	ENSTGUG00000005908	-	99	42.723	Taeniopygia_guttata
ENSKMAG00000001230	trnau1apa	100	80.906	ENSTRUG00000003352	trnau1apa	100	79.935	Takifugu_rubripes
ENSKMAG00000001230	trnau1apa	100	75.241	ENSTNIG00000006129	trnau1apa	100	75.563	Tetraodon_nigroviridis
ENSKMAG00000001230	trnau1apa	79	52.846	ENSTBEG00000008049	-	94	54.065	Tupaia_belangeri
ENSKMAG00000001230	trnau1apa	93	58.478	ENSTTRG00000001854	TRNAU1AP	95	60.208	Tursiops_truncatus
ENSKMAG00000001230	trnau1apa	90	58.633	ENSUAMG00000008789	TRNAU1AP	96	60.432	Ursus_americanus
ENSKMAG00000001230	trnau1apa	93	58.478	ENSUMAG00000011068	TRNAU1AP	95	60.208	Ursus_maritimus
ENSKMAG00000001230	trnau1apa	79	58.130	ENSVPAG00000006778	TRNAU1AP	96	52.492	Vicugna_pacos
ENSKMAG00000001230	trnau1apa	93	57.840	ENSVVUG00000012518	TRNAU1AP	89	59.375	Vulpes_vulpes
ENSKMAG00000001230	trnau1apa	99	87.582	ENSXMAG00000017361	trnau1apa	99	87.582	Xiphophorus_maculatus