EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000001243 (Gene tree)
Gene ID: 108229852
Gene Symbol: edc3
Alias: im:7151288|lsm16|wu:fb82d07|yjdc|zgc:112006
Full Name: enhancer of mRNA-decapping protein 3-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 2122 bases
Position: chrLWHD01000007.1:6126789-6128910
Accession: 108229852
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000001592	FDF	PF09532.10	4.7e-12	1	1
ENSKMAP00000001592	LSM14	PF12701.7	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000001635	-	1440	XM_017405551	ENSKMAP00000001592	479 (aa)	XP_017261040	UPI0007F8A798

Gene Model

Click here to download ENSKMAG00000001243's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000001243's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000001243	edc3	100	63.505	ENSKMAG00000001987	EDC3	100	63.711

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000001243	edc3	100	69.352	ENSG00000179151	EDC3	100	81.481	Homo_sapiens
ENSKMAG00000001243	edc3	100	58.964	ENSAPOG00000008655	EDC3	100	59.432	Acanthochromis_polyacanthus
ENSKMAG00000001243	edc3	100	92.067	ENSAPOG00000010791	edc3	100	91.649	Acanthochromis_polyacanthus
ENSKMAG00000001243	edc3	100	68.762	ENSAMEG00000008963	EDC3	100	68.762	Ailuropoda_melanoleuca
ENSKMAG00000001243	edc3	99	63.960	ENSACIG00000005330	EDC3	99	64.529	Amphilophus_citrinellus
ENSKMAG00000001243	edc3	100	89.979	ENSACIG00000017751	edc3	100	89.979	Amphilophus_citrinellus
ENSKMAG00000001243	edc3	100	64.948	ENSAOCG00000009103	-	100	64.948	Amphiprion_ocellaris
ENSKMAG00000001243	edc3	100	92.484	ENSAOCG00000005431	edc3	100	92.067	Amphiprion_ocellaris
ENSKMAG00000001243	edc3	100	92.484	ENSAPEG00000000968	edc3	100	92.067	Amphiprion_percula
ENSKMAG00000001243	edc3	100	65.155	ENSAPEG00000007841	EDC3	100	65.155	Amphiprion_percula
ENSKMAG00000001243	edc3	100	92.276	ENSATEG00000015505	edc3	100	92.067	Anabas_testudineus
ENSKMAG00000001243	edc3	100	66.186	ENSATEG00000004205	-	100	66.186	Anabas_testudineus
ENSKMAG00000001243	edc3	89	68.271	ENSAPLG00000008957	EDC3	88	75.126	Anas_platyrhynchos
ENSKMAG00000001243	edc3	77	67.677	ENSACAG00000000460	-	100	67.424	Anolis_carolinensis
ENSKMAG00000001243	edc3	100	69.155	ENSANAG00000024078	EDC3	100	69.155	Aotus_nancymaae
ENSKMAG00000001243	edc3	100	90.605	ENSACLG00000007232	edc3	100	90.605	Astatotilapia_calliptera
ENSKMAG00000001243	edc3	100	64.803	ENSACLG00000018776	-	99	64.730	Astatotilapia_calliptera
ENSKMAG00000001243	edc3	100	79.960	ENSAMXG00000001589	edc3	100	79.563	Astyanax_mexicanus
ENSKMAG00000001243	edc3	100	69.155	ENSBTAG00000007308	EDC3	100	69.155	Bos_taurus
ENSKMAG00000001243	edc3	100	69.155	ENSCJAG00000017681	EDC3	100	69.155	Callithrix_jacchus
ENSKMAG00000001243	edc3	100	68.369	ENSCAFG00000017935	EDC3	100	68.369	Canis_familiaris
ENSKMAG00000001243	edc3	100	68.369	ENSCAFG00020003909	EDC3	100	68.369	Canis_lupus_dingo
ENSKMAG00000001243	edc3	100	69.352	ENSCHIG00000023658	EDC3	100	69.352	Capra_hircus
ENSKMAG00000001243	edc3	100	69.155	ENSTSYG00000004822	EDC3	100	68.959	Carlito_syrichta
ENSKMAG00000001243	edc3	100	69.548	ENSCPOG00000015595	EDC3	100	69.548	Cavia_porcellus
ENSKMAG00000001243	edc3	100	68.959	ENSCCAG00000021663	EDC3	100	68.959	Cebus_capucinus
ENSKMAG00000001243	edc3	100	68.885	ENSCATG00000037511	EDC3	100	68.959	Cercocebus_atys
ENSKMAG00000001243	edc3	100	69.352	ENSCLAG00000005700	EDC3	100	69.352	Chinchilla_lanigera
ENSKMAG00000001243	edc3	100	68.885	ENSCSAG00000014239	EDC3	100	68.959	Chlorocebus_sabaeus
ENSKMAG00000001243	edc3	100	70.138	ENSCPBG00000024239	EDC3	100	70.138	Chrysemys_picta_bellii
ENSKMAG00000001243	edc3	100	38.114	ENSCING00000022142	-	99	37.205	Ciona_intestinalis
ENSKMAG00000001243	edc3	100	68.885	ENSCANG00000028699	EDC3	100	68.959	Colobus_angolensis_palliatus
ENSKMAG00000001243	edc3	100	68.959	ENSCGRG00001013874	Edc3	100	68.959	Cricetulus_griseus_chok1gshd
ENSKMAG00000001243	edc3	100	68.959	ENSCGRG00000011885	Edc3	100	68.959	Cricetulus_griseus_crigri
ENSKMAG00000001243	edc3	99	89.958	ENSCSEG00000012996	edc3	99	89.540	Cynoglossus_semilaevis
ENSKMAG00000001243	edc3	100	92.067	ENSCVAG00000008023	edc3	100	92.067	Cyprinodon_variegatus
ENSKMAG00000001243	edc3	99	76.238	ENSDARG00000051931	edc3	99	76.238	Danio_rerio
ENSKMAG00000001243	edc3	100	60.971	ENSDNOG00000030661	EDC3	100	60.971	Dasypus_novemcinctus
ENSKMAG00000001243	edc3	68	81.481	ENSETEG00000002398	-	64	81.481	Echinops_telfairi
ENSKMAG00000001243	edc3	100	68.762	ENSEASG00005005071	EDC3	100	68.762	Equus_asinus_asinus
ENSKMAG00000001243	edc3	100	68.762	ENSECAG00000017994	EDC3	100	68.762	Equus_caballus
ENSKMAG00000001243	edc3	100	81.237	ENSELUG00000005794	edc3	100	81.031	Esox_lucius
ENSKMAG00000001243	edc3	100	69.647	ENSELUG00000007607	EDC3	100	69.647	Esox_lucius
ENSKMAG00000001243	edc3	100	68.959	ENSFCAG00000002014	EDC3	100	68.959	Felis_catus
ENSKMAG00000001243	edc3	98	68.072	ENSFALG00000004543	EDC3	96	67.671	Ficedula_albicollis
ENSKMAG00000001243	edc3	100	69.080	ENSFDAG00000012582	EDC3	100	69.155	Fukomys_damarensis
ENSKMAG00000001243	edc3	100	92.902	ENSFHEG00000009375	edc3	100	92.693	Fundulus_heteroclitus
ENSKMAG00000001243	edc3	100	85.685	ENSGMOG00000002715	edc3	100	85.477	Gadus_morhua
ENSKMAG00000001243	edc3	100	69.412	ENSGALG00000040181	EDC3	100	69.231	Gallus_gallus
ENSKMAG00000001243	edc3	100	92.276	ENSGAFG00000014433	edc3	100	92.276	Gambusia_affinis
ENSKMAG00000001243	edc3	100	88.518	ENSGACG00000009783	edc3	100	88.100	Gasterosteus_aculeatus
ENSKMAG00000001243	edc3	99	61.886	ENSGACG00000014671	EDC3	82	82.090	Gasterosteus_aculeatus
ENSKMAG00000001243	edc3	100	70.217	ENSGAGG00000023477	EDC3	100	70.217	Gopherus_agassizii
ENSKMAG00000001243	edc3	100	69.352	ENSGGOG00000003552	EDC3	100	69.352	Gorilla_gorilla
ENSKMAG00000001243	edc3	100	90.605	ENSHBUG00000003635	edc3	100	90.605	Haplochromis_burtoni
ENSKMAG00000001243	edc3	100	65.010	ENSHBUG00000020817	EDC3	99	64.938	Haplochromis_burtoni
ENSKMAG00000001243	edc3	100	86.694	ENSHCOG00000016834	edc3	100	86.902	Hippocampus_comes
ENSKMAG00000001243	edc3	99	79.317	ENSIPUG00000005695	edc3	100	79.317	Ictalurus_punctatus
ENSKMAG00000001243	edc3	100	69.155	ENSSTOG00000013936	EDC3	100	69.155	Ictidomys_tridecemlineatus
ENSKMAG00000001243	edc3	100	68.959	ENSJJAG00000008074	Edc3	100	68.959	Jaculus_jaculus
ENSKMAG00000001243	edc3	100	64.082	ENSLBEG00000017984	EDC3	100	64.082	Labrus_bergylta
ENSKMAG00000001243	edc3	100	89.562	ENSLBEG00000013435	edc3	99	89.353	Labrus_bergylta
ENSKMAG00000001243	edc3	100	71.595	ENSLACG00000014149	EDC3	100	71.206	Latimeria_chalumnae
ENSKMAG00000001243	edc3	99	73.279	ENSLOCG00000014625	edc3	99	73.077	Lepisosteus_oculatus
ENSKMAG00000001243	edc3	100	69.094	ENSLAFG00000002992	EDC3	100	69.094	Loxodonta_africana
ENSKMAG00000001243	edc3	100	69.080	ENSMFAG00000043074	EDC3	100	69.155	Macaca_fascicularis
ENSKMAG00000001243	edc3	100	69.080	ENSMMUG00000011071	EDC3	100	69.155	Macaca_mulatta
ENSKMAG00000001243	edc3	100	69.080	ENSMNEG00000035316	EDC3	100	69.155	Macaca_nemestrina
ENSKMAG00000001243	edc3	100	68.885	ENSMLEG00000030372	EDC3	100	68.959	Mandrillus_leucophaeus
ENSKMAG00000001243	edc3	99	64.938	ENSMAMG00000005423	-	99	64.938	Mastacembelus_armatus
ENSKMAG00000001243	edc3	100	91.023	ENSMAMG00000000505	edc3	100	90.605	Mastacembelus_armatus
ENSKMAG00000001243	edc3	100	90.397	ENSMZEG00005004892	edc3	100	90.397	Maylandia_zebra
ENSKMAG00000001243	edc3	100	64.754	ENSMZEG00005005654	EDC3	100	64.549	Maylandia_zebra
ENSKMAG00000001243	edc3	100	69.412	ENSMGAG00000002617	EDC3	100	69.231	Meleagris_gallopavo
ENSKMAG00000001243	edc3	100	69.155	ENSMICG00000043190	EDC3	100	69.155	Microcebus_murinus
ENSKMAG00000001243	edc3	100	68.762	ENSMOCG00000016205	Edc3	100	68.762	Microtus_ochrogaster
ENSKMAG00000001243	edc3	99	91.213	ENSMMOG00000012278	edc3	99	91.423	Mola_mola
ENSKMAG00000001243	edc3	100	69.276	ENSMODG00000009442	EDC3	100	68.959	Monodelphis_domestica
ENSKMAG00000001243	edc3	100	90.605	ENSMALG00000008658	edc3	100	90.188	Monopterus_albus
ENSKMAG00000001243	edc3	100	68.762	MGP_CAROLIEiJ_G0032280	Edc3	100	80.000	Mus_caroli
ENSKMAG00000001243	edc3	100	68.762	ENSMUSG00000038957	Edc3	100	80.000	Mus_musculus
ENSKMAG00000001243	edc3	100	68.762	MGP_PahariEiJ_G0015146	Edc3	100	80.000	Mus_pahari
ENSKMAG00000001243	edc3	100	68.762	MGP_SPRETEiJ_G0033420	Edc3	100	80.000	Mus_spretus
ENSKMAG00000001243	edc3	100	68.959	ENSMPUG00000017293	EDC3	100	68.959	Mustela_putorius_furo
ENSKMAG00000001243	edc3	100	69.276	ENSMLUG00000016382	EDC3	100	69.276	Myotis_lucifugus
ENSKMAG00000001243	edc3	100	68.566	ENSNGAG00000010923	Edc3	100	68.566	Nannospalax_galili
ENSKMAG00000001243	edc3	100	65.289	ENSNBRG00000007881	EDC3	99	65.217	Neolamprologus_brichardi
ENSKMAG00000001243	edc3	100	90.188	ENSNBRG00000002434	edc3	100	90.188	Neolamprologus_brichardi
ENSKMAG00000001243	edc3	100	59.528	ENSNLEG00000014577	EDC3	100	59.528	Nomascus_leucogenys
ENSKMAG00000001243	edc3	100	69.020	ENSMEUG00000009077	EDC3	100	68.836	Notamacropus_eugenii
ENSKMAG00000001243	edc3	84	81.481	ENSOPRG00000009540	-	79	81.481	Ochotona_princeps
ENSKMAG00000001243	edc3	100	61.896	ENSONIG00000002932	-	100	61.896	Oreochromis_niloticus
ENSKMAG00000001243	edc3	100	90.397	ENSONIG00000008434	edc3	100	90.397	Oreochromis_niloticus
ENSKMAG00000001243	edc3	77	66.247	ENSOCUG00000017740	EDC3	86	65.743	Oryctolagus_cuniculus
ENSKMAG00000001243	edc3	100	63.975	ENSORLG00000014399	-	98	63.975	Oryzias_latipes
ENSKMAG00000001243	edc3	100	88.518	ENSORLG00000004883	edc3	100	88.518	Oryzias_latipes
ENSKMAG00000001243	edc3	100	88.518	ENSORLG00020012262	edc3	100	88.518	Oryzias_latipes_hni
ENSKMAG00000001243	edc3	100	63.975	ENSORLG00020019446	-	100	63.975	Oryzias_latipes_hni
ENSKMAG00000001243	edc3	100	63.975	ENSORLG00015017635	-	96	63.975	Oryzias_latipes_hsok
ENSKMAG00000001243	edc3	100	88.727	ENSORLG00015005634	edc3	100	88.727	Oryzias_latipes_hsok
ENSKMAG00000001243	edc3	100	64.256	ENSOMEG00000017354	EDC3	100	64.050	Oryzias_melastigma
ENSKMAG00000001243	edc3	100	89.562	ENSOMEG00000014026	edc3	100	89.562	Oryzias_melastigma
ENSKMAG00000001243	edc3	100	68.959	ENSOGAG00000014441	EDC3	100	68.959	Otolemur_garnettii
ENSKMAG00000001243	edc3	100	68.627	ENSOARG00000003476	EDC3	100	69.020	Ovis_aries
ENSKMAG00000001243	edc3	100	69.352	ENSPPAG00000040143	EDC3	100	69.352	Pan_paniscus
ENSKMAG00000001243	edc3	100	68.959	ENSPPRG00000006257	EDC3	100	68.959	Panthera_pardus
ENSKMAG00000001243	edc3	100	68.959	ENSPTIG00000017424	EDC3	100	68.959	Panthera_tigris_altaica
ENSKMAG00000001243	edc3	100	69.352	ENSPTRG00000007279	EDC3	100	69.352	Pan_troglodytes
ENSKMAG00000001243	edc3	100	68.885	ENSPANG00000015997	EDC3	100	68.959	Papio_anubis
ENSKMAG00000001243	edc3	100	74.901	ENSPKIG00000004416	edc3	100	74.901	Paramormyrops_kingsleyae
ENSKMAG00000001243	edc3	100	76.162	ENSPKIG00000019810	EDC3	100	76.162	Paramormyrops_kingsleyae
ENSKMAG00000001243	edc3	100	65.619	ENSPSIG00000008474	EDC3	100	66.012	Pelodiscus_sinensis
ENSKMAG00000001243	edc3	100	86.694	ENSPMGG00000007223	edc3	100	86.694	Periophthalmus_magnuspinnatus
ENSKMAG00000001243	edc3	100	69.352	ENSPEMG00000015260	Edc3	100	69.352	Peromyscus_maniculatus_bairdii
ENSKMAG00000001243	edc3	99	68.762	ENSPCIG00000006276	EDC3	70	68.775	Phascolarctos_cinereus
ENSKMAG00000001243	edc3	100	92.693	ENSPFOG00000012204	edc3	100	92.693	Poecilia_formosa
ENSKMAG00000001243	edc3	100	92.693	ENSPLAG00000014420	edc3	100	92.693	Poecilia_latipinna
ENSKMAG00000001243	edc3	100	92.693	ENSPMEG00000023289	edc3	100	92.693	Poecilia_mexicana
ENSKMAG00000001243	edc3	100	92.693	ENSPREG00000016022	edc3	100	92.484	Poecilia_reticulata
ENSKMAG00000001243	edc3	100	68.566	ENSPPYG00000006642	EDC3	100	68.566	Pongo_abelii
ENSKMAG00000001243	edc3	93	81.481	ENSPCAG00000002802	EDC3	88	81.481	Procavia_capensis
ENSKMAG00000001243	edc3	100	69.352	ENSPCOG00000013364	EDC3	100	69.352	Propithecus_coquereli
ENSKMAG00000001243	edc3	100	68.959	ENSPVAG00000014733	EDC3	100	68.959	Pteropus_vampyrus
ENSKMAG00000001243	edc3	100	90.605	ENSPNYG00000021797	edc3	100	90.605	Pundamilia_nyererei
ENSKMAG00000001243	edc3	100	65.010	ENSPNYG00000009669	EDC3	99	64.938	Pundamilia_nyererei
ENSKMAG00000001243	edc3	100	79.762	ENSPNAG00000019657	edc3	100	79.960	Pygocentrus_nattereri
ENSKMAG00000001243	edc3	99	68.972	ENSRNOG00000019579	Edc3	99	68.972	Rattus_norvegicus
ENSKMAG00000001243	edc3	100	68.885	ENSRBIG00000019488	EDC3	100	68.959	Rhinopithecus_bieti
ENSKMAG00000001243	edc3	100	68.885	ENSRROG00000034959	EDC3	100	68.959	Rhinopithecus_roxellana
ENSKMAG00000001243	edc3	100	68.959	ENSSBOG00000004896	EDC3	100	68.959	Saimiri_boliviensis_boliviensis
ENSKMAG00000001243	edc3	96	68.228	ENSSHAG00000015075	EDC3	95	68.033	Sarcophilus_harrisii
ENSKMAG00000001243	edc3	100	73.554	ENSSFOG00015002439	edc3	100	72.934	Scleropages_formosus
ENSKMAG00000001243	edc3	100	79.125	ENSSFOG00015016939	edc3	100	79.125	Scleropages_formosus
ENSKMAG00000001243	edc3	99	65.975	ENSSMAG00000010176	-	99	65.768	Scophthalmus_maximus
ENSKMAG00000001243	edc3	100	89.979	ENSSMAG00000010695	edc3	100	89.770	Scophthalmus_maximus
ENSKMAG00000001243	edc3	100	68.182	ENSSDUG00000007671	EDC3	100	68.182	Seriola_dumerili
ENSKMAG00000001243	edc3	100	92.276	ENSSDUG00000021844	edc3	100	92.067	Seriola_dumerili
ENSKMAG00000001243	edc3	100	92.067	ENSSLDG00000022046	edc3	100	91.858	Seriola_lalandi_dorsalis
ENSKMAG00000001243	edc3	79	78.226	ENSSARG00000003907	EDC3	80	78.226	Sorex_araneus
ENSKMAG00000001243	edc3	100	68.102	ENSSPUG00000008232	EDC3	100	67.976	Sphenodon_punctatus
ENSKMAG00000001243	edc3	100	65.702	ENSSPAG00000020327	EDC3	100	66.116	Stegastes_partitus
ENSKMAG00000001243	edc3	100	92.067	ENSSPAG00000010009	edc3	100	91.649	Stegastes_partitus
ENSKMAG00000001243	edc3	100	71.608	ENSSSCG00000001903	EDC3	100	71.074	Sus_scrofa
ENSKMAG00000001243	edc3	100	69.428	ENSTGUG00000004007	EDC3	100	68.442	Taeniopygia_guttata
ENSKMAG00000001243	edc3	100	88.935	ENSTRUG00000017078	edc3	100	88.727	Takifugu_rubripes
ENSKMAG00000001243	edc3	100	88.565	ENSTNIG00000016047	edc3	100	88.565	Tetraodon_nigroviridis
ENSKMAG00000001243	edc3	100	69.488	ENSTTRG00000007990	EDC3	100	69.488	Tursiops_truncatus
ENSKMAG00000001243	edc3	100	68.762	ENSUAMG00000026710	-	100	68.762	Ursus_americanus
ENSKMAG00000001243	edc3	100	68.762	ENSUMAG00000005006	EDC3	96	68.762	Ursus_maritimus
ENSKMAG00000001243	edc3	84	72.222	ENSVPAG00000003499	-	79	72.222	Vicugna_pacos
ENSKMAG00000001243	edc3	100	68.369	ENSVVUG00000018601	EDC3	100	68.369	Vulpes_vulpes
ENSKMAG00000001243	edc3	72	73.639	ENSXETG00000010622	edc3	99	74.785	Xenopus_tropicalis
ENSKMAG00000001243	edc3	100	92.484	ENSXMAG00000007377	edc3	100	92.484	Xiphophorus_maculatus