EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000001346 (Gene tree)
Gene ID: 108234212
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 14497 bases
Position: chrLWHD01000025.1:1460752-1475248
Accession: 108234212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000001700	POP1	PF06978.11	4.8e-38	1	2
ENSKMAP00000001700	POP1	PF06978.11	4.8e-38	2	2
ENSKMAP00000001700	POPLD	PF08170.12	1.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000001746	POP1-201	7542	XM_017413242	ENSKMAP00000001700	957 (aa)	XP_017268731	UPI0007F92761

Gene Model

Click here to download ENSKMAG00000001346's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03008	Ribosome biogenesis in eukaryotes	KEGG
kmr03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000001346's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000001346	POP1	100	46.596	ENSG00000104356	POP1	100	46.692	Homo_sapiens
ENSKMAG00000001346	POP1	100	77.868	ENSAPOG00000008198	pop1	100	77.868	Acanthochromis_polyacanthus
ENSKMAG00000001346	POP1	100	47.404	ENSAMEG00000000556	POP1	100	47.019	Ailuropoda_melanoleuca
ENSKMAG00000001346	POP1	100	71.312	ENSACIG00000004169	POP1	100	71.443	Amphilophus_citrinellus
ENSKMAG00000001346	POP1	100	77.337	ENSAOCG00000010991	pop1	100	77.541	Amphiprion_ocellaris
ENSKMAG00000001346	POP1	100	71.010	ENSAPEG00000007607	pop1	100	70.909	Amphiprion_percula
ENSKMAG00000001346	POP1	100	73.589	ENSATEG00000024814	POP1	100	73.488	Anabas_testudineus
ENSKMAG00000001346	POP1	94	49.102	ENSAPLG00000014418	POP1	99	49.102	Anas_platyrhynchos
ENSKMAG00000001346	POP1	100	45.081	ENSACAG00000016083	POP1	100	45.081	Anolis_carolinensis
ENSKMAG00000001346	POP1	87	54.491	ENSANAG00000026360	POP1	99	52.994	Aotus_nancymaae
ENSKMAG00000001346	POP1	100	74.542	ENSACLG00000010951	pop1	100	74.542	Astatotilapia_calliptera
ENSKMAG00000001346	POP1	100	58.696	ENSAMXG00000014483	POP1	100	58.696	Astyanax_mexicanus
ENSKMAG00000001346	POP1	100	47.747	ENSBTAG00000012596	POP1	100	47.843	Bos_taurus
ENSKMAG00000001346	POP1	100	47.536	ENSCJAG00000015567	POP1	100	47.053	Callithrix_jacchus
ENSKMAG00000001346	POP1	100	48.715	ENSCAFG00000000469	POP1	100	48.617	Canis_familiaris
ENSKMAG00000001346	POP1	100	47.495	ENSCAFG00020026765	POP1	100	47.399	Canis_lupus_dingo
ENSKMAG00000001346	POP1	100	47.546	ENSCHIG00000017066	POP1	100	47.353	Capra_hircus
ENSKMAG00000001346	POP1	100	46.748	ENSTSYG00000003097	POP1	100	47.214	Carlito_syrichta
ENSKMAG00000001346	POP1	100	46.110	ENSCAPG00000007251	POP1	100	46.110	Cavia_aperea
ENSKMAG00000001346	POP1	100	47.303	ENSCPOG00000002901	POP1	100	47.303	Cavia_porcellus
ENSKMAG00000001346	POP1	100	47.522	ENSCCAG00000018939	POP1	100	47.522	Cebus_capucinus
ENSKMAG00000001346	POP1	100	46.494	ENSCATG00000040916	POP1	100	46.596	Cercocebus_atys
ENSKMAG00000001346	POP1	100	47.019	ENSCLAG00000007208	POP1	97	47.019	Chinchilla_lanigera
ENSKMAG00000001346	POP1	92	48.663	ENSCSAG00000012340	POP1	99	48.879	Chlorocebus_sabaeus
ENSKMAG00000001346	POP1	94	46.369	ENSCHOG00000011432	POP1	96	46.680	Choloepus_hoffmanni
ENSKMAG00000001346	POP1	100	49.314	ENSCPBG00000006373	POP1	100	49.169	Chrysemys_picta_bellii
ENSKMAG00000001346	POP1	100	46.456	ENSCANG00000001647	POP1	100	46.507	Colobus_angolensis_palliatus
ENSKMAG00000001346	POP1	100	46.602	ENSCGRG00001017308	Pop1	100	46.893	Cricetulus_griseus_chok1gshd
ENSKMAG00000001346	POP1	100	44.179	ENSCGRG00000010824	Pop1	100	44.378	Cricetulus_griseus_crigri
ENSKMAG00000001346	POP1	100	70.142	ENSCSEG00000008737	POP1	100	69.706	Cynoglossus_semilaevis
ENSKMAG00000001346	POP1	100	74.335	ENSCVAG00000022248	pop1	100	74.082	Cyprinodon_variegatus
ENSKMAG00000001346	POP1	53	54.653	ENSDARG00000102087	pop1	98	53.663	Danio_rerio
ENSKMAG00000001346	POP1	100	44.455	ENSDNOG00000019974	POP1	100	44.549	Dasypus_novemcinctus
ENSKMAG00000001346	POP1	100	41.279	ENSDORG00000015384	Pop1	100	41.667	Dipodomys_ordii
ENSKMAG00000001346	POP1	88	47.251	ENSETEG00000007839	POP1	88	47.251	Echinops_telfairi
ENSKMAG00000001346	POP1	52	43.615	ENSEBUG00000009897	pop1	88	46.696	Eptatretus_burgeri
ENSKMAG00000001346	POP1	100	47.036	ENSEASG00005003189	POP1	98	46.558	Equus_asinus_asinus
ENSKMAG00000001346	POP1	100	47.132	ENSECAG00000024236	POP1	100	46.654	Equus_caballus
ENSKMAG00000001346	POP1	50	75.325	ENSEEUG00000003050	-	53	78.788	Erinaceus_europaeus
ENSKMAG00000001346	POP1	100	61.914	ENSELUG00000003526	pop1	100	62.641	Esox_lucius
ENSKMAG00000001346	POP1	100	46.577	ENSFCAG00000002168	POP1	100	46.494	Felis_catus
ENSKMAG00000001346	POP1	100	46.784	ENSFALG00000005711	POP1	100	46.686	Ficedula_albicollis
ENSKMAG00000001346	POP1	100	46.036	ENSFDAG00000017068	POP1	100	46.272	Fukomys_damarensis
ENSKMAG00000001346	POP1	100	75.487	ENSFHEG00000019518	pop1	100	75.590	Fundulus_heteroclitus
ENSKMAG00000001346	POP1	100	62.564	ENSGMOG00000000659	POP1	100	62.462	Gadus_morhua
ENSKMAG00000001346	POP1	100	73.717	ENSGAFG00000019770	POP1	100	73.717	Gambusia_affinis
ENSKMAG00000001346	POP1	100	67.215	ENSGACG00000003499	pop1	100	67.118	Gasterosteus_aculeatus
ENSKMAG00000001346	POP1	100	48.882	ENSGAGG00000011737	POP1	98	48.544	Gopherus_agassizii
ENSKMAG00000001346	POP1	100	46.161	ENSGGOG00000003176	POP1	100	46.545	Gorilla_gorilla
ENSKMAG00000001346	POP1	100	74.338	ENSHBUG00000021583	pop1	100	74.338	Haplochromis_burtoni
ENSKMAG00000001346	POP1	100	46.323	ENSHGLG00000006029	POP1	100	46.425	Heterocephalus_glaber_female
ENSKMAG00000001346	POP1	100	46.323	ENSHGLG00100016879	POP1	100	46.425	Heterocephalus_glaber_male
ENSKMAG00000001346	POP1	100	64.671	ENSHCOG00000013888	pop1	100	63.872	Hippocampus_comes
ENSKMAG00000001346	POP1	100	55.926	ENSIPUG00000018336	pop1	100	56.004	Ictalurus_punctatus
ENSKMAG00000001346	POP1	100	46.391	ENSSTOG00000011455	POP1	97	45.910	Ictidomys_tridecemlineatus
ENSKMAG00000001346	POP1	100	45.259	ENSJJAG00000013325	Pop1	100	45.339	Jaculus_jaculus
ENSKMAG00000001346	POP1	100	66.598	ENSLBEG00000024457	POP1	100	66.084	Labrus_bergylta
ENSKMAG00000001346	POP1	92	51.512	ENSLACG00000012498	POP1	97	51.503	Latimeria_chalumnae
ENSKMAG00000001346	POP1	100	55.534	ENSLOCG00000009817	POP1	100	55.664	Lepisosteus_oculatus
ENSKMAG00000001346	POP1	100	47.519	ENSLAFG00000010770	POP1	100	47.323	Loxodonta_africana
ENSKMAG00000001346	POP1	100	46.507	ENSMFAG00000000347	POP1	100	46.411	Macaca_fascicularis
ENSKMAG00000001346	POP1	100	46.500	ENSMNEG00000036870	POP1	100	46.500	Macaca_nemestrina
ENSKMAG00000001346	POP1	100	46.302	ENSMLEG00000034986	POP1	100	46.449	Mandrillus_leucophaeus
ENSKMAG00000001346	POP1	100	73.455	ENSMAMG00000004040	pop1	100	73.658	Mastacembelus_armatus
ENSKMAG00000001346	POP1	100	74.440	ENSMZEG00005025448	pop1	100	74.440	Maylandia_zebra
ENSKMAG00000001346	POP1	100	46.117	ENSMGAG00000012167	POP1	100	46.095	Meleagris_gallopavo
ENSKMAG00000001346	POP1	100	46.647	ENSMAUG00000017537	Pop1	100	46.647	Mesocricetus_auratus
ENSKMAG00000001346	POP1	100	46.220	ENSMICG00000004361	POP1	100	46.316	Microcebus_murinus
ENSKMAG00000001346	POP1	100	45.750	ENSMOCG00000006356	Pop1	100	45.769	Microtus_ochrogaster
ENSKMAG00000001346	POP1	100	65.321	ENSMMOG00000018242	pop1	100	65.424	Mola_mola
ENSKMAG00000001346	POP1	100	46.213	ENSMODG00000006561	POP1	100	46.021	Monodelphis_domestica
ENSKMAG00000001346	POP1	100	72.912	ENSMALG00000012621	POP1	100	72.273	Monopterus_albus
ENSKMAG00000001346	POP1	100	43.989	MGP_CAROLIEiJ_G0019726	Pop1	100	43.989	Mus_caroli
ENSKMAG00000001346	POP1	100	44.562	ENSMUSG00000022325	Pop1	100	44.562	Mus_musculus
ENSKMAG00000001346	POP1	100	44.732	MGP_PahariEiJ_G0019735	Pop1	100	44.689	Mus_pahari
ENSKMAG00000001346	POP1	100	44.434	MGP_SPRETEiJ_G0020622	Pop1	100	44.434	Mus_spretus
ENSKMAG00000001346	POP1	100	47.784	ENSMPUG00000015250	POP1	100	47.881	Mustela_putorius_furo
ENSKMAG00000001346	POP1	100	46.036	ENSMLUG00000010204	POP1	100	45.949	Myotis_lucifugus
ENSKMAG00000001346	POP1	100	46.449	ENSNGAG00000001582	Pop1	100	46.654	Nannospalax_galili
ENSKMAG00000001346	POP1	100	69.097	ENSNBRG00000002356	pop1	100	68.789	Neolamprologus_brichardi
ENSKMAG00000001346	POP1	100	47.042	ENSNLEG00000002541	POP1	100	47.042	Nomascus_leucogenys
ENSKMAG00000001346	POP1	88	55.587	ENSMEUG00000003118	POP1	90	55.587	Notamacropus_eugenii
ENSKMAG00000001346	POP1	100	46.957	ENSOPRG00000007667	POP1	100	46.957	Ochotona_princeps
ENSKMAG00000001346	POP1	100	47.404	ENSODEG00000003984	POP1	100	47.404	Octodon_degus
ENSKMAG00000001346	POP1	100	75.153	ENSONIG00000016445	pop1	100	75.153	Oreochromis_niloticus
ENSKMAG00000001346	POP1	61	46.296	ENSOANG00000001278	-	94	45.527	Ornithorhynchus_anatinus
ENSKMAG00000001346	POP1	100	46.660	ENSOCUG00000017400	POP1	100	46.183	Oryctolagus_cuniculus
ENSKMAG00000001346	POP1	100	73.320	ENSORLG00000002839	pop1	100	73.320	Oryzias_latipes
ENSKMAG00000001346	POP1	100	66.332	ENSORLG00020022450	POP1	96	70.099	Oryzias_latipes_hni
ENSKMAG00000001346	POP1	100	73.216	ENSORLG00015012746	POP1	100	73.216	Oryzias_latipes_hsok
ENSKMAG00000001346	POP1	100	72.349	ENSOMEG00000006915	pop1	99	72.349	Oryzias_melastigma
ENSKMAG00000001346	POP1	100	46.051	ENSOGAG00000001466	POP1	100	46.337	Otolemur_garnettii
ENSKMAG00000001346	POP1	100	46.692	ENSPPAG00000018410	POP1	100	46.788	Pan_paniscus
ENSKMAG00000001346	POP1	100	46.132	ENSPPRG00000005002	POP1	100	46.323	Panthera_pardus
ENSKMAG00000001346	POP1	100	46.827	ENSPTIG00000016527	POP1	100	46.743	Panthera_tigris_altaica
ENSKMAG00000001346	POP1	100	46.692	ENSPTRG00000020458	POP1	100	46.788	Pan_troglodytes
ENSKMAG00000001346	POP1	100	46.398	ENSPANG00000009704	POP1	100	46.302	Papio_anubis
ENSKMAG00000001346	POP1	100	59.490	ENSPKIG00000016325	POP1	100	59.592	Paramormyrops_kingsleyae
ENSKMAG00000001346	POP1	100	48.541	ENSPSIG00000012343	POP1	100	48.491	Pelodiscus_sinensis
ENSKMAG00000001346	POP1	100	61.776	ENSPMGG00000022253	POP1	100	61.577	Periophthalmus_magnuspinnatus
ENSKMAG00000001346	POP1	99	45.774	ENSPEMG00000023633	Pop1	100	45.782	Peromyscus_maniculatus_bairdii
ENSKMAG00000001346	POP1	91	42.332	ENSPMAG00000003209	POP1	100	42.332	Petromyzon_marinus
ENSKMAG00000001346	POP1	100	46.088	ENSPCIG00000012216	POP1	100	45.992	Phascolarctos_cinereus
ENSKMAG00000001346	POP1	100	73.922	ENSPFOG00000012490	POP1	100	73.922	Poecilia_formosa
ENSKMAG00000001346	POP1	100	74.330	ENSPLAG00000004646	POP1	100	74.097	Poecilia_latipinna
ENSKMAG00000001346	POP1	100	74.025	ENSPMEG00000019592	POP1	100	74.025	Poecilia_mexicana
ENSKMAG00000001346	POP1	100	74.078	ENSPREG00000020951	POP1	100	73.975	Poecilia_reticulata
ENSKMAG00000001346	POP1	100	46.800	ENSPPYG00000018777	POP1	100	46.800	Pongo_abelii
ENSKMAG00000001346	POP1	100	45.350	ENSPCAG00000016662	POP1	100	45.254	Procavia_capensis
ENSKMAG00000001346	POP1	100	46.794	ENSPCOG00000019420	POP1	100	46.711	Propithecus_coquereli
ENSKMAG00000001346	POP1	100	46.917	ENSPVAG00000014468	POP1	100	46.884	Pteropus_vampyrus
ENSKMAG00000001346	POP1	100	69.001	ENSPNYG00000004476	pop1	100	69.310	Pundamilia_nyererei
ENSKMAG00000001346	POP1	100	56.043	ENSPNAG00000000265	pop1	100	55.859	Pygocentrus_nattereri
ENSKMAG00000001346	POP1	100	45.288	ENSRNOG00000005243	Pop1	100	45.288	Rattus_norvegicus
ENSKMAG00000001346	POP1	100	46.494	ENSRBIG00000007996	POP1	100	46.494	Rhinopithecus_bieti
ENSKMAG00000001346	POP1	100	46.494	ENSRROG00000012334	POP1	100	46.398	Rhinopithecus_roxellana
ENSKMAG00000001346	POP1	99	46.854	ENSSBOG00000020830	POP1	93	48.175	Saimiri_boliviensis_boliviensis
ENSKMAG00000001346	POP1	100	46.660	ENSSHAG00000000296	POP1	100	46.176	Sarcophilus_harrisii
ENSKMAG00000001346	POP1	100	60.164	ENSSFOG00015007429	pop1	99	60.062	Scleropages_formosus
ENSKMAG00000001346	POP1	100	71.104	ENSSMAG00000010467	POP1	100	71.546	Scophthalmus_maximus
ENSKMAG00000001346	POP1	100	74.168	ENSSDUG00000007817	POP1	100	74.141	Seriola_dumerili
ENSKMAG00000001346	POP1	100	74.168	ENSSLDG00000012565	POP1	100	74.141	Seriola_lalandi_dorsalis
ENSKMAG00000001346	POP1	100	46.512	ENSSPUG00000003550	-	100	45.894	Sphenodon_punctatus
ENSKMAG00000001346	POP1	100	73.727	ENSSPAG00000014955	pop1	100	72.811	Stegastes_partitus
ENSKMAG00000001346	POP1	100	47.512	ENSSSCG00000006078	POP1	100	47.707	Sus_scrofa
ENSKMAG00000001346	POP1	94	44.643	ENSTGUG00000012011	-	99	44.223	Taeniopygia_guttata
ENSKMAG00000001346	POP1	100	68.667	ENSTRUG00000010856	pop1	100	68.053	Takifugu_rubripes
ENSKMAG00000001346	POP1	95	69.465	ENSTNIG00000013297	pop1	99	69.465	Tetraodon_nigroviridis
ENSKMAG00000001346	POP1	92	45.597	ENSTBEG00000014214	POP1	85	50.794	Tupaia_belangeri
ENSKMAG00000001346	POP1	100	46.013	ENSTTRG00000016071	POP1	100	45.962	Tursiops_truncatus
ENSKMAG00000001346	POP1	99	47.956	ENSUAMG00000017309	POP1	95	49.311	Ursus_americanus
ENSKMAG00000001346	POP1	100	46.494	ENSUMAG00000016952	POP1	100	51.128	Ursus_maritimus
ENSKMAG00000001346	POP1	86	52.143	ENSVPAG00000008278	POP1	81	51.071	Vicugna_pacos
ENSKMAG00000001346	POP1	100	47.495	ENSVVUG00000010994	POP1	100	47.161	Vulpes_vulpes
ENSKMAG00000001346	POP1	100	64.604	ENSXCOG00000017043	POP1	100	64.242	Xiphophorus_couchianus
ENSKMAG00000001346	POP1	100	73.608	ENSXMAG00000002472	POP1	100	73.608	Xiphophorus_maculatus