EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000001373 (Gene tree)
Gene ID: 108249101
Gene Symbol: rnaseh1
Alias: zgc:91971
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 2366 bases
Position: chrLWHD01000408.1:64996-67361
Accession: 108249101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000001727	RNase_H	PF00075.24	1.4e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000001773	-	1170	XM_017438255	ENSKMAP00000001727	292 (aa)	XP_017293744	UPI0007F896F2

Gene Model

Click here to download ENSKMAG00000001373's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000001373's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000001373	rnaseh1	88	54.717	ENSG00000171865	RNASEH1	90	54.717	Homo_sapiens
ENSKMAG00000001373	rnaseh1	96	73.356	ENSAPOG00000000412	rnaseh1	96	73.356	Acanthochromis_polyacanthus
ENSKMAG00000001373	rnaseh1	88	53.585	ENSAMEG00000018433	RNASEH1	89	53.992	Ailuropoda_melanoleuca
ENSKMAG00000001373	rnaseh1	98	75.517	ENSACIG00000014666	rnaseh1	97	75.517	Amphilophus_citrinellus
ENSKMAG00000001373	rnaseh1	97	75.601	ENSAOCG00000015210	rnaseh1	97	75.601	Amphiprion_ocellaris
ENSKMAG00000001373	rnaseh1	99	73.559	ENSAPEG00000014104	rnaseh1	98	73.559	Amphiprion_percula
ENSKMAG00000001373	rnaseh1	99	74.411	ENSATEG00000000598	rnaseh1	98	78.623	Anabas_testudineus
ENSKMAG00000001373	rnaseh1	84	52.344	ENSAPLG00000001961	RNASEH1	100	52.344	Anas_platyrhynchos
ENSKMAG00000001373	rnaseh1	90	48.000	ENSACAG00000016857	rnaseh1	93	48.000	Anolis_carolinensis
ENSKMAG00000001373	rnaseh1	88	55.472	ENSANAG00000024055	RNASEH1	90	55.472	Aotus_nancymaae
ENSKMAG00000001373	rnaseh1	98	73.913	ENSACLG00000006741	rnaseh1	97	73.913	Astatotilapia_calliptera
ENSKMAG00000001373	rnaseh1	93	52.941	ENSAMXG00000042940	rnaseh1	97	56.015	Astyanax_mexicanus
ENSKMAG00000001373	rnaseh1	89	56.015	ENSBTAG00000016235	RNASEH1	91	56.015	Bos_taurus
ENSKMAG00000001373	rnaseh1	89	37.931	WBGene00004382	rnh-1.0	97	37.931	Caenorhabditis_elegans
ENSKMAG00000001373	rnaseh1	88	55.556	ENSCJAG00000035450	RNASEH1	89	55.556	Callithrix_jacchus
ENSKMAG00000001373	rnaseh1	88	54.753	ENSCAFG00000003259	RNASEH1	89	54.753	Canis_familiaris
ENSKMAG00000001373	rnaseh1	52	64.901	ENSCAFG00020004994	RNASEH1	97	64.901	Canis_lupus_dingo
ENSKMAG00000001373	rnaseh1	89	54.779	ENSCHIG00000022264	-	90	54.779	Capra_hircus
ENSKMAG00000001373	rnaseh1	81	44.490	ENSCHIG00000022230	-	99	44.490	Capra_hircus
ENSKMAG00000001373	rnaseh1	89	54.275	ENSTSYG00000012926	RNASEH1	89	54.275	Carlito_syrichta
ENSKMAG00000001373	rnaseh1	83	56.000	ENSCAPG00000004813	RNASEH1	99	56.000	Cavia_aperea
ENSKMAG00000001373	rnaseh1	97	52.560	ENSCPOG00000022278	Rnaseh1	96	52.560	Cavia_porcellus
ENSKMAG00000001373	rnaseh1	88	55.556	ENSCCAG00000038017	RNASEH1	89	55.556	Cebus_capucinus
ENSKMAG00000001373	rnaseh1	88	54.440	ENSCATG00000016515	-	89	54.440	Cercocebus_atys
ENSKMAG00000001373	rnaseh1	88	50.192	ENSCATG00000016818	-	89	50.192	Cercocebus_atys
ENSKMAG00000001373	rnaseh1	96	52.297	ENSCLAG00000002440	RNASEH1	98	52.297	Chinchilla_lanigera
ENSKMAG00000001373	rnaseh1	88	54.753	ENSCSAG00000006943	RNASEH1	90	54.753	Chlorocebus_sabaeus
ENSKMAG00000001373	rnaseh1	53	66.883	ENSCHOG00000008547	RNASEH1	76	66.883	Choloepus_hoffmanni
ENSKMAG00000001373	rnaseh1	88	54.104	ENSCPBG00000021620	RNASEH1	99	54.104	Chrysemys_picta_bellii
ENSKMAG00000001373	rnaseh1	95	36.207	ENSCING00000014054	-	98	36.207	Ciona_intestinalis
ENSKMAG00000001373	rnaseh1	74	37.447	ENSCSAVG00000000009	-	96	37.447	Ciona_savignyi
ENSKMAG00000001373	rnaseh1	88	54.717	ENSCANG00000037763	RNASEH1	90	54.717	Colobus_angolensis_palliatus
ENSKMAG00000001373	rnaseh1	88	54.545	ENSCGRG00001008950	Rnaseh1	99	50.508	Cricetulus_griseus_chok1gshd
ENSKMAG00000001373	rnaseh1	88	54.545	ENSCGRG00000006029	Rnaseh1	99	50.508	Cricetulus_griseus_crigri
ENSKMAG00000001373	rnaseh1	96	63.140	ENSCSEG00000005741	rnaseh1	98	65.603	Cynoglossus_semilaevis
ENSKMAG00000001373	rnaseh1	99	72.000	ENSCVAG00000018717	rnaseh1	99	72.000	Cyprinodon_variegatus
ENSKMAG00000001373	rnaseh1	90	66.667	ENSDARG00000042571	rnaseh1	98	66.667	Danio_rerio
ENSKMAG00000001373	rnaseh1	88	54.789	ENSDNOG00000016056	RNASEH1	90	54.789	Dasypus_novemcinctus
ENSKMAG00000001373	rnaseh1	97	51.361	ENSDORG00000000704	Rnaseh1	99	51.361	Dipodomys_ordii
ENSKMAG00000001373	rnaseh1	88	38.621	FBgn0023171	rnh1	92	38.621	Drosophila_melanogaster
ENSKMAG00000001373	rnaseh1	88	51.737	ENSETEG00000012674	RNASEH1	89	51.737	Echinops_telfairi
ENSKMAG00000001373	rnaseh1	89	47.766	ENSEBUG00000008898	rnaseh1	99	47.766	Eptatretus_burgeri
ENSKMAG00000001373	rnaseh1	98	44.262	ENSEBUG00000006116	rnaseh1	92	44.262	Eptatretus_burgeri
ENSKMAG00000001373	rnaseh1	88	56.031	ENSEASG00005022200	RNASEH1	87	56.031	Equus_asinus_asinus
ENSKMAG00000001373	rnaseh1	88	56.031	ENSECAG00000020695	RNASEH1	87	56.031	Equus_caballus
ENSKMAG00000001373	rnaseh1	96	67.010	ENSELUG00000010112	rnaseh1	98	67.010	Esox_lucius
ENSKMAG00000001373	rnaseh1	88	55.303	ENSFCAG00000025832	RNASEH1	89	55.303	Felis_catus
ENSKMAG00000001373	rnaseh1	98	52.614	ENSFALG00000002069	RNASEH1	99	52.787	Ficedula_albicollis
ENSKMAG00000001373	rnaseh1	96	53.169	ENSFDAG00000002035	RNASEH1	87	53.169	Fukomys_damarensis
ENSKMAG00000001373	rnaseh1	97	67.241	ENSGMOG00000013818	rnaseh1	99	67.241	Gadus_morhua
ENSKMAG00000001373	rnaseh1	97	51.014	ENSGALG00000016389	RNASEH1	99	51.014	Gallus_gallus
ENSKMAG00000001373	rnaseh1	95	74.035	ENSGAFG00000001776	rnaseh1	97	74.035	Gambusia_affinis
ENSKMAG00000001373	rnaseh1	95	73.611	ENSGACG00000011935	rnaseh1	97	73.611	Gasterosteus_aculeatus
ENSKMAG00000001373	rnaseh1	91	53.237	ENSGAGG00000009150	RNASEH1	62	54.152	Gopherus_agassizii
ENSKMAG00000001373	rnaseh1	88	55.263	ENSGGOG00000034822	RNASEH1	90	55.263	Gorilla_gorilla
ENSKMAG00000001373	rnaseh1	99	72.757	ENSHBUG00000004666	rnaseh1	97	72.757	Haplochromis_burtoni
ENSKMAG00000001373	rnaseh1	88	54.475	ENSHGLG00000002585	Rnaseh1	82	54.475	Heterocephalus_glaber_female
ENSKMAG00000001373	rnaseh1	88	54.475	ENSHGLG00100005105	Rnaseh1	82	54.475	Heterocephalus_glaber_male
ENSKMAG00000001373	rnaseh1	97	69.128	ENSHCOG00000012329	rnaseh1	98	70.134	Hippocampus_comes
ENSKMAG00000001373	rnaseh1	90	61.278	ENSIPUG00000023060	rnaseh1	98	61.278	Ictalurus_punctatus
ENSKMAG00000001373	rnaseh1	88	55.894	ENSSTOG00000012774	RNASEH1	91	55.894	Ictidomys_tridecemlineatus
ENSKMAG00000001373	rnaseh1	86	45.455	ENSJJAG00000008994	-	89	45.455	Jaculus_jaculus
ENSKMAG00000001373	rnaseh1	80	53.846	ENSJJAG00000020238	Rnaseh1	90	53.846	Jaculus_jaculus
ENSKMAG00000001373	rnaseh1	88	50.965	ENSJJAG00000021481	-	89	50.965	Jaculus_jaculus
ENSKMAG00000001373	rnaseh1	96	70.833	ENSLBEG00000004480	rnaseh1	97	75.188	Labrus_bergylta
ENSKMAG00000001373	rnaseh1	90	53.405	ENSLACG00000007100	RNASEH1	90	55.000	Latimeria_chalumnae
ENSKMAG00000001373	rnaseh1	91	60.072	ENSLOCG00000017212	rnaseh1	100	60.072	Lepisosteus_oculatus
ENSKMAG00000001373	rnaseh1	88	55.642	ENSLAFG00000015091	RNASEH1	89	55.642	Loxodonta_africana
ENSKMAG00000001373	rnaseh1	88	54.717	ENSMFAG00000000063	-	90	54.717	Macaca_fascicularis
ENSKMAG00000001373	rnaseh1	90	51.145	ENSMFAG00000002323	-	91	51.145	Macaca_fascicularis
ENSKMAG00000001373	rnaseh1	88	51.163	ENSMMUG00000019280	-	90	51.163	Macaca_mulatta
ENSKMAG00000001373	rnaseh1	90	50.763	ENSMNEG00000029676	-	91	50.763	Macaca_nemestrina
ENSKMAG00000001373	rnaseh1	88	55.094	ENSMNEG00000040183	-	90	55.094	Macaca_nemestrina
ENSKMAG00000001373	rnaseh1	88	53.101	ENSMLEG00000028662	-	90	53.101	Mandrillus_leucophaeus
ENSKMAG00000001373	rnaseh1	83	54.435	ENSMLEG00000039352	-	99	54.435	Mandrillus_leucophaeus
ENSKMAG00000001373	rnaseh1	98	73.898	ENSMAMG00000019725	rnaseh1	98	76.534	Mastacembelus_armatus
ENSKMAG00000001373	rnaseh1	98	73.913	ENSMZEG00005013006	rnaseh1	97	73.913	Maylandia_zebra
ENSKMAG00000001373	rnaseh1	79	55.144	ENSMGAG00000013979	RNASEH1	99	55.144	Meleagris_gallopavo
ENSKMAG00000001373	rnaseh1	88	54.264	ENSMAUG00000014957	Rnaseh1	90	54.264	Mesocricetus_auratus
ENSKMAG00000001373	rnaseh1	88	55.894	ENSMICG00000033156	RNASEH1	88	55.894	Microcebus_murinus
ENSKMAG00000001373	rnaseh1	88	55.094	ENSMOCG00000015522	Rnaseh1	90	55.094	Microtus_ochrogaster
ENSKMAG00000001373	rnaseh1	98	71.331	ENSMMOG00000015902	rnaseh1	97	71.331	Mola_mola
ENSKMAG00000001373	rnaseh1	82	48.178	ENSMODG00000028814	-	96	48.988	Monodelphis_domestica
ENSKMAG00000001373	rnaseh1	91	53.875	ENSMODG00000014491	-	92	53.875	Monodelphis_domestica
ENSKMAG00000001373	rnaseh1	99	72.727	ENSMALG00000010565	rnaseh1	99	72.727	Monopterus_albus
ENSKMAG00000001373	rnaseh1	97	52.365	MGP_CAROLIEiJ_G0017660	Rnaseh1	99	52.365	Mus_caroli
ENSKMAG00000001373	rnaseh1	97	52.703	ENSMUSG00000020630	Rnaseh1	99	52.703	Mus_musculus
ENSKMAG00000001373	rnaseh1	96	51.568	MGP_PahariEiJ_G0029418	Rnaseh1	99	51.903	Mus_pahari
ENSKMAG00000001373	rnaseh1	97	53.061	MGP_SPRETEiJ_G0018502	Rnaseh1	99	53.061	Mus_spretus
ENSKMAG00000001373	rnaseh1	59	59.659	ENSMPUG00000012984	RNASEH1	85	59.659	Mustela_putorius_furo
ENSKMAG00000001373	rnaseh1	88	55.598	ENSNGAG00000015966	Rnaseh1	84	55.598	Nannospalax_galili
ENSKMAG00000001373	rnaseh1	98	73.913	ENSNBRG00000008739	rnaseh1	97	73.913	Neolamprologus_brichardi
ENSKMAG00000001373	rnaseh1	88	48.289	ENSNLEG00000015400	RNASEH1	87	48.289	Nomascus_leucogenys
ENSKMAG00000001373	rnaseh1	81	50.417	ENSNLEG00000000059	-	88	50.417	Nomascus_leucogenys
ENSKMAG00000001373	rnaseh1	64	46.277	ENSMEUG00000003610	-	65	46.277	Notamacropus_eugenii
ENSKMAG00000001373	rnaseh1	89	55.344	ENSOPRG00000005072	RNASEH1	90	55.344	Ochotona_princeps
ENSKMAG00000001373	rnaseh1	88	57.252	ENSODEG00000000235	Rnaseh1	86	57.252	Octodon_degus
ENSKMAG00000001373	rnaseh1	91	77.698	ENSONIG00000018697	rnaseh1	100	77.698	Oreochromis_niloticus
ENSKMAG00000001373	rnaseh1	88	54.887	ENSOCUG00000006117	RNASEH1	90	54.887	Oryctolagus_cuniculus
ENSKMAG00000001373	rnaseh1	92	75.912	ENSORLG00000018127	rnaseh1	99	75.912	Oryzias_latipes
ENSKMAG00000001373	rnaseh1	95	75.357	ENSORLG00020013660	rnaseh1	94	75.357	Oryzias_latipes_hni
ENSKMAG00000001373	rnaseh1	95	75.357	ENSORLG00015011338	rnaseh1	94	75.357	Oryzias_latipes_hsok
ENSKMAG00000001373	rnaseh1	85	73.228	ENSOMEG00000004710	rnaseh1	95	73.228	Oryzias_melastigma
ENSKMAG00000001373	rnaseh1	88	54.511	ENSOGAG00000017176	RNASEH1	89	54.511	Otolemur_garnettii
ENSKMAG00000001373	rnaseh1	96	46.382	ENSOARG00000005386	RNASEH1	98	46.382	Ovis_aries
ENSKMAG00000001373	rnaseh1	88	54.717	ENSPPAG00000034221	RNASEH1	90	54.717	Pan_paniscus
ENSKMAG00000001373	rnaseh1	88	55.682	ENSPPRG00000015513	RNASEH1	89	55.682	Panthera_pardus
ENSKMAG00000001373	rnaseh1	82	56.048	ENSPTIG00000019034	RNASEH1	83	56.048	Panthera_tigris_altaica
ENSKMAG00000001373	rnaseh1	81	48.207	ENSPTRG00000043403	-	91	48.207	Pan_troglodytes
ENSKMAG00000001373	rnaseh1	88	54.717	ENSPTRG00000011614	RNASEH1	90	54.717	Pan_troglodytes
ENSKMAG00000001373	rnaseh1	88	50.775	ENSPANG00000018246	-	89	50.775	Papio_anubis
ENSKMAG00000001373	rnaseh1	88	54.753	ENSPANG00000000443	RNASEH1	98	54.618	Papio_anubis
ENSKMAG00000001373	rnaseh1	90	60.584	ENSPKIG00000003146	rnaseh1	99	61.679	Paramormyrops_kingsleyae
ENSKMAG00000001373	rnaseh1	88	52.593	ENSPSIG00000002937	RNASEH1	99	52.416	Pelodiscus_sinensis
ENSKMAG00000001373	rnaseh1	90	65.779	ENSPMGG00000017463	rnaseh1	94	65.779	Periophthalmus_magnuspinnatus
ENSKMAG00000001373	rnaseh1	97	51.178	ENSPEMG00000022465	-	99	52.721	Peromyscus_maniculatus_bairdii
ENSKMAG00000001373	rnaseh1	54	36.875	ENSPCIG00000026047	-	90	36.875	Phascolarctos_cinereus
ENSKMAG00000001373	rnaseh1	97	51.536	ENSPCIG00000023334	-	98	51.536	Phascolarctos_cinereus
ENSKMAG00000001373	rnaseh1	98	73.129	ENSPFOG00000002841	rnaseh1	99	73.129	Poecilia_formosa
ENSKMAG00000001373	rnaseh1	65	64.796	ENSPLAG00000021349	-	77	64.796	Poecilia_latipinna
ENSKMAG00000001373	rnaseh1	98	73.129	ENSPMEG00000016826	rnaseh1	99	73.129	Poecilia_mexicana
ENSKMAG00000001373	rnaseh1	98	71.667	ENSPREG00000012197	rnaseh1	99	71.667	Poecilia_reticulata
ENSKMAG00000001373	rnaseh1	88	44.906	ENSPPYG00000025873	RNASEH1	88	44.906	Pongo_abelii
ENSKMAG00000001373	rnaseh1	81	50.617	ENSPPYG00000008067	-	90	50.617	Pongo_abelii
ENSKMAG00000001373	rnaseh1	89	53.008	ENSPCAG00000002500	RNASEH1	90	53.008	Procavia_capensis
ENSKMAG00000001373	rnaseh1	88	48.092	ENSPCOG00000019444	RNASEH1	89	48.092	Propithecus_coquereli
ENSKMAG00000001373	rnaseh1	89	52.107	ENSPVAG00000002070	RNASEH1	90	52.107	Pteropus_vampyrus
ENSKMAG00000001373	rnaseh1	98	73.579	ENSPNYG00000001292	rnaseh1	97	73.579	Pundamilia_nyererei
ENSKMAG00000001373	rnaseh1	90	64.469	ENSPNAG00000022344	rnaseh1	91	64.469	Pygocentrus_nattereri
ENSKMAG00000001373	rnaseh1	96	51.916	ENSRNOG00000008584	Rnaseh1	99	52.595	Rattus_norvegicus
ENSKMAG00000001373	rnaseh1	88	54.340	ENSRBIG00000034222	RNASEH1	89	54.340	Rhinopithecus_bieti
ENSKMAG00000001373	rnaseh1	88	54.340	ENSRROG00000041761	RNASEH1	89	54.340	Rhinopithecus_roxellana
ENSKMAG00000001373	rnaseh1	88	52.273	YMR234W	-	82	52.273	Saccharomyces_cerevisiae
ENSKMAG00000001373	rnaseh1	88	55.185	ENSSBOG00000025411	RNASEH1	89	55.185	Saimiri_boliviensis_boliviensis
ENSKMAG00000001373	rnaseh1	97	53.220	ENSSHAG00000013051	RNASEH1	98	53.220	Sarcophilus_harrisii
ENSKMAG00000001373	rnaseh1	91	62.921	ENSSFOG00015002709	rnaseh1	96	60.884	Scleropages_formosus
ENSKMAG00000001373	rnaseh1	98	72.391	ENSSMAG00000007586	rnaseh1	98	72.391	Scophthalmus_maximus
ENSKMAG00000001373	rnaseh1	99	72.910	ENSSDUG00000008217	rnaseh1	98	77.174	Seriola_dumerili
ENSKMAG00000001373	rnaseh1	90	72.059	ENSSLDG00000000442	rnaseh1	95	76.587	Seriola_lalandi_dorsalis
ENSKMAG00000001373	rnaseh1	89	53.676	ENSSPUG00000006644	RNASEH1	93	53.676	Sphenodon_punctatus
ENSKMAG00000001373	rnaseh1	98	75.084	ENSSPAG00000009353	rnaseh1	98	75.084	Stegastes_partitus
ENSKMAG00000001373	rnaseh1	89	55.805	ENSSSCG00000025305	RNASEH1	90	55.805	Sus_scrofa
ENSKMAG00000001373	rnaseh1	97	52.318	ENSTGUG00000012980	RNASEH1	99	52.318	Taeniopygia_guttata
ENSKMAG00000001373	rnaseh1	97	67.123	ENSTRUG00000015774	rnaseh1	99	70.036	Takifugu_rubripes
ENSKMAG00000001373	rnaseh1	90	74.349	ENSTNIG00000010715	rnaseh1	97	74.349	Tetraodon_nigroviridis
ENSKMAG00000001373	rnaseh1	89	51.493	ENSTTRG00000001615	RNASEH1	90	51.493	Tursiops_truncatus
ENSKMAG00000001373	rnaseh1	52	64.901	ENSUAMG00000018254	RNASEH1	78	64.901	Ursus_americanus
ENSKMAG00000001373	rnaseh1	68	52.427	ENSUMAG00000003941	RNASEH1	65	52.427	Ursus_maritimus
ENSKMAG00000001373	rnaseh1	89	47.388	ENSVPAG00000011589	RNASEH1	90	47.388	Vicugna_pacos
ENSKMAG00000001373	rnaseh1	88	54.753	ENSVVUG00000008633	RNASEH1	80	54.753	Vulpes_vulpes
ENSKMAG00000001373	rnaseh1	88	41.016	ENSXETG00000030371	-	99	41.016	Xenopus_tropicalis
ENSKMAG00000001373	rnaseh1	92	53.571	ENSXETG00000001212	rnaseh1	95	53.571	Xenopus_tropicalis
ENSKMAG00000001373	rnaseh1	98	71.959	ENSXMAG00000002357	rnaseh1	99	71.959	Xiphophorus_maculatus