EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000001390 (Gene tree)
Gene ID: 108241037
Gene Symbol: prpf3
Alias: HPRP3|wu:fa11f05
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 7438 bases
Position: chrLWHD01000082.1:191755-199192
Accession: 108241037
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000001809	PRP3	PF08572.10	1.8e-73	1	1
ENSKMAP00000001871	PRP3	PF08572.10	4.9e-71	1	1
ENSKMAP00000001871	PWI	PF01480.17	4.3e-12	1	1
ENSKMAP00000001809	PWI	PF01480.17	5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000001917	-	1872	-	ENSKMAP00000001871	623 (aa)	-	-
ENSKMAT00000001855	-	2901	XM_017424939	ENSKMAP00000001809	698 (aa)	XP_017280428	UPI0007F88807

Gene Model

Click here to download ENSKMAG00000001390's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000001390's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000001390	prpf3	99	70.597	ENSG00000117360	PRPF3	100	70.881	Homo_sapiens
ENSKMAG00000001390	prpf3	100	89.429	ENSAPOG00000015584	prpf3	100	89.286	Acanthochromis_polyacanthus
ENSKMAG00000001390	prpf3	99	70.739	ENSAMEG00000001630	PRPF3	100	71.023	Ailuropoda_melanoleuca
ENSKMAG00000001390	prpf3	100	86.932	ENSACIG00000007876	prpf3	100	87.216	Amphilophus_citrinellus
ENSKMAG00000001390	prpf3	100	89.016	ENSAOCG00000011449	prpf3	100	88.730	Amphiprion_ocellaris
ENSKMAG00000001390	prpf3	100	87.840	ENSATEG00000023583	prpf3	100	87.840	Anabas_testudineus
ENSKMAG00000001390	prpf3	99	71.550	ENSAPLG00000002440	PRPF3	100	71.408	Anas_platyrhynchos
ENSKMAG00000001390	prpf3	99	71.449	ENSACAG00000003176	PRPF3	100	71.733	Anolis_carolinensis
ENSKMAG00000001390	prpf3	99	70.597	ENSANAG00000026138	PRPF3	100	70.881	Aotus_nancymaae
ENSKMAG00000001390	prpf3	100	87.249	ENSACLG00000020127	prpf3	100	86.383	Astatotilapia_calliptera
ENSKMAG00000001390	prpf3	100	81.180	ENSAMXG00000007306	prpf3	100	80.618	Astyanax_mexicanus
ENSKMAG00000001390	prpf3	99	70.597	ENSBTAG00000013946	PRPF3	100	70.881	Bos_taurus
ENSKMAG00000001390	prpf3	87	38.968	WBGene00010844	prp-3	96	35.957	Caenorhabditis_elegans
ENSKMAG00000001390	prpf3	99	70.597	ENSCJAG00000009926	PRPF3	100	70.881	Callithrix_jacchus
ENSKMAG00000001390	prpf3	99	70.597	ENSCAFG00000011820	PRPF3	100	70.881	Canis_familiaris
ENSKMAG00000001390	prpf3	81	69.894	ENSCAFG00020019653	PRPF3	100	70.423	Canis_lupus_dingo
ENSKMAG00000001390	prpf3	99	70.597	ENSCHIG00000015434	PRPF3	100	70.881	Capra_hircus
ENSKMAG00000001390	prpf3	99	70.839	ENSTSYG00000001383	PRPF3	100	71.124	Carlito_syrichta
ENSKMAG00000001390	prpf3	92	64.286	ENSCAPG00000017812	PRPF3	95	64.677	Cavia_aperea
ENSKMAG00000001390	prpf3	99	70.697	ENSCPOG00000008068	PRPF3	100	70.982	Cavia_porcellus
ENSKMAG00000001390	prpf3	99	70.597	ENSCCAG00000026380	PRPF3	100	70.881	Cebus_capucinus
ENSKMAG00000001390	prpf3	99	58.956	ENSCATG00000041778	PRPF3	100	59.238	Cercocebus_atys
ENSKMAG00000001390	prpf3	99	70.739	ENSCLAG00000015009	PRPF3	100	71.023	Chinchilla_lanigera
ENSKMAG00000001390	prpf3	76	79.562	ENSCHOG00000011645	PRPF3	76	80.364	Choloepus_hoffmanni
ENSKMAG00000001390	prpf3	99	71.408	ENSCPBG00000008216	PRPF3	100	71.693	Chrysemys_picta_bellii
ENSKMAG00000001390	prpf3	65	58.010	ENSCING00000003312	-	99	58.010	Ciona_intestinalis
ENSKMAG00000001390	prpf3	85	52.030	ENSCSAVG00000008720	-	96	51.541	Ciona_savignyi
ENSKMAG00000001390	prpf3	99	70.028	ENSCANG00000036769	PRPF3	100	70.312	Colobus_angolensis_palliatus
ENSKMAG00000001390	prpf3	99	70.597	ENSCGRG00001019100	Prpf3	100	70.881	Cricetulus_griseus_chok1gshd
ENSKMAG00000001390	prpf3	99	70.597	ENSCGRG00000007322	Prpf3	100	70.881	Cricetulus_griseus_crigri
ENSKMAG00000001390	prpf3	100	85.647	ENSCSEG00000002532	prpf3	100	85.647	Cynoglossus_semilaevis
ENSKMAG00000001390	prpf3	100	89.255	ENSCVAG00000009318	prpf3	100	89.255	Cyprinodon_variegatus
ENSKMAG00000001390	prpf3	100	79.830	ENSDARG00000086425	prpf3	100	80.556	Danio_rerio
ENSKMAG00000001390	prpf3	99	73.281	ENSDNOG00000005904	PRPF3	100	73.479	Dasypus_novemcinctus
ENSKMAG00000001390	prpf3	93	70.382	ENSDORG00000008664	Prpf3	100	70.687	Dipodomys_ordii
ENSKMAG00000001390	prpf3	91	50.746	FBgn0036915	Prp3	99	53.211	Drosophila_melanogaster
ENSKMAG00000001390	prpf3	99	70.739	ENSETEG00000019124	PRPF3	100	71.165	Echinops_telfairi
ENSKMAG00000001390	prpf3	100	60.456	ENSEBUG00000011680	prpf3	100	59.761	Eptatretus_burgeri
ENSKMAG00000001390	prpf3	99	70.455	ENSEASG00005001566	PRPF3	100	70.739	Equus_asinus_asinus
ENSKMAG00000001390	prpf3	99	70.597	ENSECAG00000019840	PRPF3	100	70.881	Equus_caballus
ENSKMAG00000001390	prpf3	84	70.975	ENSEEUG00000007338	PRPF3	85	70.748	Erinaceus_europaeus
ENSKMAG00000001390	prpf3	100	74.148	ENSELUG00000013624	prpf3	100	74.006	Esox_lucius
ENSKMAG00000001390	prpf3	99	70.597	ENSFCAG00000013940	PRPF3	100	70.881	Felis_catus
ENSKMAG00000001390	prpf3	99	70.739	ENSFDAG00000010365	PRPF3	100	71.023	Fukomys_damarensis
ENSKMAG00000001390	prpf3	100	89.255	ENSFHEG00000021746	prpf3	100	89.112	Fundulus_heteroclitus
ENSKMAG00000001390	prpf3	100	80.312	ENSGMOG00000008535	prpf3	100	80.312	Gadus_morhua
ENSKMAG00000001390	prpf3	99	71.693	ENSGALG00000028205	PRPF3	100	71.550	Gallus_gallus
ENSKMAG00000001390	prpf3	100	87.393	ENSGAFG00000012671	prpf3	100	87.268	Gambusia_affinis
ENSKMAG00000001390	prpf3	100	86.752	ENSGACG00000011792	prpf3	100	86.467	Gasterosteus_aculeatus
ENSKMAG00000001390	prpf3	99	71.266	ENSGAGG00000013765	PRPF3	99	74.047	Gopherus_agassizii
ENSKMAG00000001390	prpf3	86	75.516	ENSGGOG00000013174	PRPF3	100	76.696	Gorilla_gorilla
ENSKMAG00000001390	prpf3	100	87.234	ENSHBUG00000003493	prpf3	100	86.667	Haplochromis_burtoni
ENSKMAG00000001390	prpf3	99	70.455	ENSHGLG00000016569	PRPF3	100	70.739	Heterocephalus_glaber_female
ENSKMAG00000001390	prpf3	99	53.120	ENSHGLG00000016033	-	100	53.343	Heterocephalus_glaber_female
ENSKMAG00000001390	prpf3	99	53.395	ENSHGLG00100008951	-	100	53.621	Heterocephalus_glaber_male
ENSKMAG00000001390	prpf3	99	70.455	ENSHGLG00100007590	PRPF3	100	70.739	Heterocephalus_glaber_male
ENSKMAG00000001390	prpf3	100	81.624	ENSHCOG00000014058	prpf3	100	81.624	Hippocampus_comes
ENSKMAG00000001390	prpf3	100	80.966	ENSIPUG00000000902	PRPF3	100	80.398	Ictalurus_punctatus
ENSKMAG00000001390	prpf3	99	70.597	ENSSTOG00000001889	PRPF3	100	70.881	Ictidomys_tridecemlineatus
ENSKMAG00000001390	prpf3	100	89.841	ENSLBEG00000026310	prpf3	100	95.652	Labrus_bergylta
ENSKMAG00000001390	prpf3	93	67.737	ENSLACG00000010541	PRPF3	100	67.378	Latimeria_chalumnae
ENSKMAG00000001390	prpf3	99	70.597	ENSLAFG00000004713	PRPF3	100	70.881	Loxodonta_africana
ENSKMAG00000001390	prpf3	99	70.597	ENSMFAG00000039791	PRPF3	100	70.881	Macaca_fascicularis
ENSKMAG00000001390	prpf3	92	69.984	ENSMMUG00000016301	PRPF3	97	71.429	Macaca_mulatta
ENSKMAG00000001390	prpf3	99	70.597	ENSMNEG00000038161	PRPF3	100	70.881	Macaca_nemestrina
ENSKMAG00000001390	prpf3	98	48.567	ENSMLEG00000041065	-	97	48.762	Mandrillus_leucophaeus
ENSKMAG00000001390	prpf3	86	75.516	ENSMLEG00000040609	PRPF3	100	76.696	Mandrillus_leucophaeus
ENSKMAG00000001390	prpf3	100	87.500	ENSMAMG00000014968	prpf3	100	87.500	Mastacembelus_armatus
ENSKMAG00000001390	prpf3	100	89.744	ENSMZEG00005015970	prpf3	100	89.744	Maylandia_zebra
ENSKMAG00000001390	prpf3	99	71.693	ENSMGAG00000000707	PRPF3	100	71.550	Meleagris_gallopavo
ENSKMAG00000001390	prpf3	99	70.455	ENSMAUG00000017112	Prpf3	100	70.881	Mesocricetus_auratus
ENSKMAG00000001390	prpf3	99	70.555	ENSMICG00000015386	PRPF3	99	74.047	Microcebus_murinus
ENSKMAG00000001390	prpf3	99	70.597	ENSMOCG00000000242	Prpf3	100	70.881	Microtus_ochrogaster
ENSKMAG00000001390	prpf3	100	81.250	ENSMMOG00000016131	prpf3	100	81.127	Mola_mola
ENSKMAG00000001390	prpf3	99	70.881	ENSMODG00000018774	PRPF3	100	71.165	Monodelphis_domestica
ENSKMAG00000001390	prpf3	100	84.143	ENSMALG00000007257	prpf3	100	84.241	Monopterus_albus
ENSKMAG00000001390	prpf3	99	70.697	MGP_CAROLIEiJ_G0025354	Prpf3	100	70.982	Mus_caroli
ENSKMAG00000001390	prpf3	99	70.697	ENSMUSG00000015748	Prpf3	100	70.982	Mus_musculus
ENSKMAG00000001390	prpf3	99	70.839	MGP_PahariEiJ_G0026798	Prpf3	100	71.124	Mus_pahari
ENSKMAG00000001390	prpf3	99	70.697	MGP_SPRETEiJ_G0026298	Prpf3	100	70.982	Mus_spretus
ENSKMAG00000001390	prpf3	99	69.362	ENSMPUG00000005080	PRPF3	100	69.504	Mustela_putorius_furo
ENSKMAG00000001390	prpf3	99	70.638	ENSMLUG00000004646	-	100	70.922	Myotis_lucifugus
ENSKMAG00000001390	prpf3	99	70.597	ENSNGAG00000000910	Prpf3	100	70.881	Nannospalax_galili
ENSKMAG00000001390	prpf3	100	87.201	ENSNBRG00000003462	prpf3	100	87.201	Neolamprologus_brichardi
ENSKMAG00000001390	prpf3	90	70.952	ENSNLEG00000009841	PRPF3	99	71.429	Nomascus_leucogenys
ENSKMAG00000001390	prpf3	83	61.947	ENSMEUG00000008733	PRPF3	89	63.008	Notamacropus_eugenii
ENSKMAG00000001390	prpf3	99	70.597	ENSOPRG00000010139	PRPF3	100	70.881	Ochotona_princeps
ENSKMAG00000001390	prpf3	99	52.941	ENSODEG00000014412	-	100	53.456	Octodon_degus
ENSKMAG00000001390	prpf3	99	70.881	ENSODEG00000011363	-	100	71.165	Octodon_degus
ENSKMAG00000001390	prpf3	100	89.047	ENSONIG00000006394	prpf3	100	89.047	Oreochromis_niloticus
ENSKMAG00000001390	prpf3	99	54.298	ENSOANG00000015441	PRPF3	100	54.298	Ornithorhynchus_anatinus
ENSKMAG00000001390	prpf3	99	70.597	ENSOCUG00000011760	PRPF3	100	70.881	Oryctolagus_cuniculus
ENSKMAG00000001390	prpf3	100	86.695	ENSORLG00000010330	prpf3	100	85.980	Oryzias_latipes
ENSKMAG00000001390	prpf3	100	86.695	ENSORLG00020009054	prpf3	100	85.980	Oryzias_latipes_hni
ENSKMAG00000001390	prpf3	100	86.409	ENSORLG00015015016	prpf3	100	85.694	Oryzias_latipes_hsok
ENSKMAG00000001390	prpf3	100	88.013	ENSOMEG00000000940	prpf3	100	88.170	Oryzias_melastigma
ENSKMAG00000001390	prpf3	99	66.856	ENSOGAG00000005352	PRPF3	100	67.139	Otolemur_garnettii
ENSKMAG00000001390	prpf3	99	70.597	ENSOARG00000020798	PRPF3	100	70.881	Ovis_aries
ENSKMAG00000001390	prpf3	99	70.455	ENSPPAG00000030983	PRPF3	100	70.739	Pan_paniscus
ENSKMAG00000001390	prpf3	98	56.024	ENSPPAG00000043769	-	99	55.271	Pan_paniscus
ENSKMAG00000001390	prpf3	99	70.597	ENSPPRG00000000731	PRPF3	100	70.881	Panthera_pardus
ENSKMAG00000001390	prpf3	99	70.597	ENSPTIG00000005516	PRPF3	100	70.881	Panthera_tigris_altaica
ENSKMAG00000001390	prpf3	99	70.597	ENSPTRG00000001254	PRPF3	100	70.881	Pan_troglodytes
ENSKMAG00000001390	prpf3	98	54.819	ENSPTRG00000047819	-	99	54.367	Pan_troglodytes
ENSKMAG00000001390	prpf3	99	70.455	ENSPANG00000000499	PRPF3	100	70.739	Papio_anubis
ENSKMAG00000001390	prpf3	100	84.127	ENSPKIG00000010501	prpf3	100	84.127	Paramormyrops_kingsleyae
ENSKMAG00000001390	prpf3	99	71.652	ENSPSIG00000014877	PRPF3	100	71.652	Pelodiscus_sinensis
ENSKMAG00000001390	prpf3	100	82.250	ENSPMGG00000007776	prpf3	100	82.567	Periophthalmus_magnuspinnatus
ENSKMAG00000001390	prpf3	99	70.597	ENSPEMG00000011672	Prpf3	100	70.881	Peromyscus_maniculatus_bairdii
ENSKMAG00000001390	prpf3	68	72.311	ENSPMAG00000005588	prpf3	97	72.540	Petromyzon_marinus
ENSKMAG00000001390	prpf3	99	70.881	ENSPCIG00000008795	PRPF3	100	71.165	Phascolarctos_cinereus
ENSKMAG00000001390	prpf3	100	86.056	ENSPFOG00000013638	prpf3	100	86.913	Poecilia_formosa
ENSKMAG00000001390	prpf3	100	87.536	ENSPLAG00000018103	prpf3	100	87.393	Poecilia_latipinna
ENSKMAG00000001390	prpf3	100	87.393	ENSPMEG00000023546	prpf3	100	87.249	Poecilia_mexicana
ENSKMAG00000001390	prpf3	100	87.249	ENSPREG00000017216	prpf3	100	86.963	Poecilia_reticulata
ENSKMAG00000001390	prpf3	76	61.423	ENSPPYG00000018646	-	99	61.985	Pongo_abelii
ENSKMAG00000001390	prpf3	93	69.360	ENSPPYG00000000900	PRPF3	99	69.665	Pongo_abelii
ENSKMAG00000001390	prpf3	85	74.364	ENSPCAG00000014908	PRPF3	87	71.895	Procavia_capensis
ENSKMAG00000001390	prpf3	99	70.455	ENSPCOG00000013828	PRPF3	100	70.739	Propithecus_coquereli
ENSKMAG00000001390	prpf3	99	70.170	ENSPVAG00000013472	PRPF3	100	70.455	Pteropus_vampyrus
ENSKMAG00000001390	prpf3	100	87.482	ENSPNYG00000004279	prpf3	100	87.482	Pundamilia_nyererei
ENSKMAG00000001390	prpf3	100	83.438	ENSPNAG00000001799	prpf3	100	83.438	Pygocentrus_nattereri
ENSKMAG00000001390	prpf3	99	70.839	ENSRNOG00000025629	Prpf3	100	71.124	Rattus_norvegicus
ENSKMAG00000001390	prpf3	83	70.922	ENSRBIG00000028854	PRPF3	98	72.535	Rhinopithecus_bieti
ENSKMAG00000001390	prpf3	99	70.597	ENSRROG00000027464	PRPF3	100	70.881	Rhinopithecus_roxellana
ENSKMAG00000001390	prpf3	99	64.347	ENSSBOG00000033104	PRPF3	100	64.631	Saimiri_boliviensis_boliviensis
ENSKMAG00000001390	prpf3	99	70.496	ENSSHAG00000009548	PRPF3	100	70.780	Sarcophilus_harrisii
ENSKMAG00000001390	prpf3	100	83.622	ENSSFOG00015022014	prpf3	100	83.622	Scleropages_formosus
ENSKMAG00000001390	prpf3	100	86.338	ENSSMAG00000015739	prpf3	100	85.915	Scophthalmus_maximus
ENSKMAG00000001390	prpf3	100	84.097	ENSSDUG00000006840	prpf3	100	83.811	Seriola_dumerili
ENSKMAG00000001390	prpf3	100	86.779	ENSSLDG00000015423	prpf3	100	87.060	Seriola_lalandi_dorsalis
ENSKMAG00000001390	prpf3	99	70.597	ENSSARG00000011064	PRPF3	100	70.881	Sorex_araneus
ENSKMAG00000001390	prpf3	99	70.927	ENSSPUG00000000809	PRPF3	100	71.108	Sphenodon_punctatus
ENSKMAG00000001390	prpf3	100	91.011	ENSSPAG00000018721	prpf3	100	96.739	Stegastes_partitus
ENSKMAG00000001390	prpf3	99	70.597	ENSSSCG00000030119	PRPF3	99	74.592	Sus_scrofa
ENSKMAG00000001390	prpf3	99	61.418	ENSTGUG00000004552	PRPF3	100	61.277	Taeniopygia_guttata
ENSKMAG00000001390	prpf3	100	81.116	ENSTRUG00000014923	prpf3	100	81.116	Takifugu_rubripes
ENSKMAG00000001390	prpf3	99	89.130	ENSTNIG00000008058	prpf3	100	82.062	Tetraodon_nigroviridis
ENSKMAG00000001390	prpf3	81	70.295	ENSTBEG00000014072	PRPF3	87	72.562	Tupaia_belangeri
ENSKMAG00000001390	prpf3	99	65.909	ENSTTRG00000010616	PRPF3	100	66.193	Tursiops_truncatus
ENSKMAG00000001390	prpf3	85	74.000	ENSUAMG00000009345	PRPF3	99	74.592	Ursus_americanus
ENSKMAG00000001390	prpf3	99	70.597	ENSUMAG00000003720	PRPF3	100	70.881	Ursus_maritimus
ENSKMAG00000001390	prpf3	88	75.510	ENSVPAG00000005425	PRPF3	88	76.417	Vicugna_pacos
ENSKMAG00000001390	prpf3	99	73.041	ENSVVUG00000007933	PRPF3	100	73.552	Vulpes_vulpes
ENSKMAG00000001390	prpf3	99	69.830	ENSXETG00000018654	prpf3	100	70.113	Xenopus_tropicalis
ENSKMAG00000001390	prpf3	100	88.443	ENSXMAG00000016347	prpf3	100	88.443	Xiphophorus_maculatus