EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000001393 (Gene tree)
Gene ID: 108244471
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 26198 bases
Position: chrLWHD01000142.1:1027292-1053489
Accession: 108244471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000001743	tRNA-synt_1g	PF09334.11	3.7e-15	1	1
ENSKMAP00000001751	tRNA-synt_1g	PF09334.11	3.9e-15	1	1
ENSKMAP00000001743	Anticodon_1	PF08264.13	9.2e-34	1	1
ENSKMAP00000001751	Anticodon_1	PF08264.13	9.5e-34	1	1
ENSKMAP00000001743	tRNA-synt_1	PF00133.22	2.8e-192	1	1
ENSKMAP00000001751	tRNA-synt_1	PF00133.22	2.9e-192	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000001789	-	3572	XM_017430707	ENSKMAP00000001743	1088 (aa)	XP_017286196	UPI0007F91067
ENSKMAT00000001797	-	3611	-	ENSKMAP00000001751	1101 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000001393's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000001393's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000001393	vars2	98	45.287	ENSKMAG00000009455	vars	80	46.339

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000001393	vars2	99	79.263	ENSAPOG00000007396	vars2	99	79.263	Acanthochromis_polyacanthus
ENSKMAG00000001393	vars2	96	51.426	ENSAMEG00000012997	VARS2	92	51.393	Ailuropoda_melanoleuca
ENSKMAG00000001393	vars2	99	76.449	ENSACIG00000004344	vars2	99	76.449	Amphilophus_citrinellus
ENSKMAG00000001393	vars2	99	79.263	ENSAOCG00000000476	vars2	99	79.263	Amphiprion_ocellaris
ENSKMAG00000001393	vars2	99	79.078	ENSAPEG00000008646	vars2	97	79.078	Amphiprion_percula
ENSKMAG00000001393	vars2	99	77.461	ENSATEG00000012291	vars2	99	77.523	Anabas_testudineus
ENSKMAG00000001393	vars2	96	52.991	ENSACAG00000022093	VARS2	95	52.991	Anolis_carolinensis
ENSKMAG00000001393	vars2	97	50.187	ENSANAG00000038018	VARS2	93	50.821	Aotus_nancymaae
ENSKMAG00000001393	vars2	99	76.519	ENSACLG00000018673	vars2	99	76.519	Astatotilapia_calliptera
ENSKMAG00000001393	vars2	96	69.187	ENSAMXG00000017773	vars2	95	70.517	Astyanax_mexicanus
ENSKMAG00000001393	vars2	98	51.028	ENSBTAG00000010698	VARS2	94	51.265	Bos_taurus
ENSKMAG00000001393	vars2	97	50.187	ENSCJAG00000019826	VARS2	93	50.918	Callithrix_jacchus
ENSKMAG00000001393	vars2	97	52.125	ENSCAFG00000000454	VARS2	94	52.422	Canis_familiaris
ENSKMAG00000001393	vars2	84	56.769	ENSCAFG00020019387	VARS2	89	56.811	Canis_lupus_dingo
ENSKMAG00000001393	vars2	96	51.238	ENSCHIG00000007847	VARS2	94	51.591	Capra_hircus
ENSKMAG00000001393	vars2	99	50.138	ENSTSYG00000009904	VARS2	93	51.456	Carlito_syrichta
ENSKMAG00000001393	vars2	88	51.771	ENSCAPG00000017770	VARS2	99	51.771	Cavia_aperea
ENSKMAG00000001393	vars2	96	51.426	ENSCPOG00000021834	VARS2	93	51.654	Cavia_porcellus
ENSKMAG00000001393	vars2	97	50.375	ENSCCAG00000037907	VARS2	93	51.111	Cebus_capucinus
ENSKMAG00000001393	vars2	96	50.571	ENSCATG00000032554	VARS2	93	51.068	Cercocebus_atys
ENSKMAG00000001393	vars2	99	51.109	ENSCLAG00000002889	VARS2	93	51.942	Chinchilla_lanigera
ENSKMAG00000001393	vars2	95	51.056	ENSCSAG00000008327	VARS2	92	51.566	Chlorocebus_sabaeus
ENSKMAG00000001393	vars2	91	54.774	ENSCPBG00000021502	VARS2	96	54.774	Chrysemys_picta_bellii
ENSKMAG00000001393	vars2	96	50.571	ENSCANG00000014991	VARS2	92	50.971	Colobus_angolensis_palliatus
ENSKMAG00000001393	vars2	96	51.088	ENSCGRG00001021535	Vars2	93	51.619	Cricetulus_griseus_chok1gshd
ENSKMAG00000001393	vars2	96	51.088	ENSCGRG00000014112	Vars2	93	51.619	Cricetulus_griseus_crigri
ENSKMAG00000001393	vars2	99	64.067	ENSCSEG00000015432	vars2	97	72.026	Cynoglossus_semilaevis
ENSKMAG00000001393	vars2	66	78.121	ENSCVAG00000017765	vars2	98	78.121	Cyprinodon_variegatus
ENSKMAG00000001393	vars2	99	67.558	ENSDARG00000056717	vars2	100	67.373	Danio_rerio
ENSKMAG00000001393	vars2	80	49.602	ENSDORG00000008516	Vars2	93	49.602	Dipodomys_ordii
ENSKMAG00000001393	vars2	97	45.624	ENSETEG00000014844	VARS2	93	46.415	Echinops_telfairi
ENSKMAG00000001393	vars2	96	51.240	ENSEASG00005019997	VARS2	94	54.079	Equus_asinus_asinus
ENSKMAG00000001393	vars2	96	51.431	ENSECAG00000018202	VARS2	93	52.110	Equus_caballus
ENSKMAG00000001393	vars2	99	67.828	ENSELUG00000017824	vars2	96	69.694	Esox_lucius
ENSKMAG00000001393	vars2	96	51.711	ENSFCAG00000010531	VARS2	95	51.678	Felis_catus
ENSKMAG00000001393	vars2	96	51.429	ENSFDAG00000017216	VARS2	93	52.012	Fukomys_damarensis
ENSKMAG00000001393	vars2	94	75.049	ENSFHEG00000013932	vars2	98	74.853	Fundulus_heteroclitus
ENSKMAG00000001393	vars2	89	70.000	ENSGMOG00000018960	vars2	99	70.000	Gadus_morhua
ENSKMAG00000001393	vars2	93	76.747	ENSGAFG00000004737	vars2	100	76.747	Gambusia_affinis
ENSKMAG00000001393	vars2	93	75.961	ENSGACG00000001464	vars2	99	76.152	Gasterosteus_aculeatus
ENSKMAG00000001393	vars2	91	54.945	ENSGAGG00000011652	VARS2	99	54.618	Gopherus_agassizii
ENSKMAG00000001393	vars2	96	50.523	ENSGGOG00000014587	VARS2	93	51.018	Gorilla_gorilla
ENSKMAG00000001393	vars2	99	73.524	ENSHBUG00000002448	vars2	100	73.524	Haplochromis_burtoni
ENSKMAG00000001393	vars2	99	50.551	ENSHGLG00000012886	VARS2	90	52.233	Heterocephalus_glaber_female
ENSKMAG00000001393	vars2	99	50.460	ENSHGLG00100016535	VARS2	93	52.404	Heterocephalus_glaber_male
ENSKMAG00000001393	vars2	68	73.315	ENSHCOG00000017907	vars2	98	73.056	Hippocampus_comes
ENSKMAG00000001393	vars2	94	69.620	ENSIPUG00000015573	Vars2	99	68.015	Ictalurus_punctatus
ENSKMAG00000001393	vars2	97	50.756	ENSSTOG00000009924	VARS2	93	51.165	Ictidomys_tridecemlineatus
ENSKMAG00000001393	vars2	98	50.233	ENSJJAG00000011144	Vars2	93	51.566	Jaculus_jaculus
ENSKMAG00000001393	vars2	51	81.159	ENSLBEG00000005480	-	81	80.797	Labrus_bergylta
ENSKMAG00000001393	vars2	99	71.912	ENSLBEG00000011949	vars2	99	71.912	Labrus_bergylta
ENSKMAG00000001393	vars2	96	50.613	ENSLACG00000001576	-	99	50.849	Latimeria_chalumnae
ENSKMAG00000001393	vars2	96	51.238	ENSLAFG00000015183	VARS2	94	50.872	Loxodonta_africana
ENSKMAG00000001393	vars2	96	50.381	ENSMFAG00000042367	VARS2	93	50.875	Macaca_fascicularis
ENSKMAG00000001393	vars2	96	50.476	ENSMMUG00000018609	VARS2	93	50.973	Macaca_mulatta
ENSKMAG00000001393	vars2	96	50.381	ENSMNEG00000043163	VARS2	93	50.875	Macaca_nemestrina
ENSKMAG00000001393	vars2	95	50.623	ENSMLEG00000041728	VARS2	91	50.971	Mandrillus_leucophaeus
ENSKMAG00000001393	vars2	100	76.011	ENSMAMG00000020339	vars2	100	75.802	Mastacembelus_armatus
ENSKMAG00000001393	vars2	99	76.427	ENSMZEG00005017669	vars2	99	76.427	Maylandia_zebra
ENSKMAG00000001393	vars2	98	50.653	ENSMAUG00000018946	Vars2	93	51.553	Mesocricetus_auratus
ENSKMAG00000001393	vars2	80	56.314	ENSMICG00000005365	VARS2	93	56.927	Microcebus_murinus
ENSKMAG00000001393	vars2	96	46.837	ENSMOCG00000014607	Vars2	93	47.190	Microtus_ochrogaster
ENSKMAG00000001393	vars2	99	73.665	ENSMMOG00000012122	vars2	99	73.665	Mola_mola
ENSKMAG00000001393	vars2	94	50.383	ENSMODG00000015848	VARS2	92	50.530	Monodelphis_domestica
ENSKMAG00000001393	vars2	99	73.641	ENSMALG00000009217	vars2	99	76.031	Monopterus_albus
ENSKMAG00000001393	vars2	98	51.169	MGP_CAROLIEiJ_G0021529	Vars2	97	54.110	Mus_caroli
ENSKMAG00000001393	vars2	98	50.702	ENSMUSG00000038838	Vars2	98	53.741	Mus_musculus
ENSKMAG00000001393	vars2	96	51.141	MGP_PahariEiJ_G0020523	Vars2	93	55.516	Mus_pahari
ENSKMAG00000001393	vars2	98	50.702	MGP_SPRETEiJ_G0022436	Vars2	97	53.767	Mus_spretus
ENSKMAG00000001393	vars2	96	51.996	ENSMPUG00000011643	VARS2	94	51.969	Mustela_putorius_furo
ENSKMAG00000001393	vars2	89	54.082	ENSMLUG00000002356	VARS2	86	53.744	Myotis_lucifugus
ENSKMAG00000001393	vars2	97	47.830	ENSNGAG00000020607	Vars2	93	48.159	Nannospalax_galili
ENSKMAG00000001393	vars2	72	66.851	ENSNBRG00000001624	vars2	61	66.851	Neolamprologus_brichardi
ENSKMAG00000001393	vars2	94	50.435	ENSNLEG00000005625	VARS2	91	50.936	Nomascus_leucogenys
ENSKMAG00000001393	vars2	76	55.500	ENSMEUG00000014475	VARS2	88	55.500	Notamacropus_eugenii
ENSKMAG00000001393	vars2	88	52.683	ENSOPRG00000000682	VARS2	83	58.434	Ochotona_princeps
ENSKMAG00000001393	vars2	96	50.428	ENSODEG00000017965	VARS2	93	51.068	Octodon_degus
ENSKMAG00000001393	vars2	93	57.936	ENSONIG00000004734	vars2	100	57.936	Oreochromis_niloticus
ENSKMAG00000001393	vars2	72	43.694	ENSOANG00000000398	-	91	43.694	Ornithorhynchus_anatinus
ENSKMAG00000001393	vars2	96	47.925	ENSOCUG00000021496	VARS2	60	49.031	Oryctolagus_cuniculus
ENSKMAG00000001393	vars2	99	72.961	ENSORLG00000010632	vars2	99	72.869	Oryzias_latipes
ENSKMAG00000001393	vars2	99	73.144	ENSORLG00020018584	vars2	99	72.777	Oryzias_latipes_hni
ENSKMAG00000001393	vars2	99	72.777	ENSORLG00015010408	vars2	99	72.777	Oryzias_latipes_hsok
ENSKMAG00000001393	vars2	99	72.661	ENSOMEG00000008360	vars2	99	72.661	Oryzias_melastigma
ENSKMAG00000001393	vars2	95	50.622	ENSOGAG00000006087	VARS2	91	50.775	Otolemur_garnettii
ENSKMAG00000001393	vars2	98	50.327	ENSOARG00000010844	VARS2	93	51.060	Ovis_aries
ENSKMAG00000001393	vars2	96	50.523	ENSPPAG00000041141	VARS2	93	50.921	Pan_paniscus
ENSKMAG00000001393	vars2	96	51.711	ENSPPRG00000006751	VARS2	91	52.136	Panthera_pardus
ENSKMAG00000001393	vars2	96	51.616	ENSPTIG00000017799	VARS2	97	52.348	Panthera_tigris_altaica
ENSKMAG00000001393	vars2	96	50.523	ENSPTRG00000034497	VARS2	93	50.921	Pan_troglodytes
ENSKMAG00000001393	vars2	96	50.476	ENSPANG00000018481	VARS2	94	51.804	Papio_anubis
ENSKMAG00000001393	vars2	96	66.475	ENSPKIG00000011372	vars2	95	66.444	Paramormyrops_kingsleyae
ENSKMAG00000001393	vars2	58	62.579	ENSPSIG00000006206	VARS2	92	62.250	Pelodiscus_sinensis
ENSKMAG00000001393	vars2	99	69.649	ENSPMGG00000000465	vars2	96	71.360	Periophthalmus_magnuspinnatus
ENSKMAG00000001393	vars2	96	51.183	ENSPEMG00000014691	Vars2	93	51.650	Peromyscus_maniculatus_bairdii
ENSKMAG00000001393	vars2	96	51.005	ENSPCIG00000015040	VARS2	93	51.619	Phascolarctos_cinereus
ENSKMAG00000001393	vars2	99	76.580	ENSPFOG00000017616	vars2	96	78.000	Poecilia_formosa
ENSKMAG00000001393	vars2	100	77.135	ENSPLAG00000019778	vars2	100	76.930	Poecilia_latipinna
ENSKMAG00000001393	vars2	100	76.951	ENSPMEG00000011123	vars2	100	76.746	Poecilia_mexicana
ENSKMAG00000001393	vars2	97	69.660	ENSPREG00000014998	vars2	99	69.442	Poecilia_reticulata
ENSKMAG00000001393	vars2	96	50.523	ENSPPYG00000016424	VARS2	93	51.224	Pongo_abelii
ENSKMAG00000001393	vars2	64	54.167	ENSPCAG00000006946	VARS2	63	54.167	Procavia_capensis
ENSKMAG00000001393	vars2	96	50.189	ENSPCOG00000014839	VARS2	91	50.483	Propithecus_coquereli
ENSKMAG00000001393	vars2	96	50.382	ENSPVAG00000004197	VARS2	94	50.778	Pteropus_vampyrus
ENSKMAG00000001393	vars2	87	80.863	ENSPNYG00000010314	vars2	100	80.863	Pundamilia_nyererei
ENSKMAG00000001393	vars2	99	67.818	ENSPNAG00000026793	vars2	100	67.548	Pygocentrus_nattereri
ENSKMAG00000001393	vars2	98	50.140	ENSRNOG00000000833	Vars2	93	50.777	Rattus_norvegicus
ENSKMAG00000001393	vars2	96	50.381	ENSRBIG00000032725	VARS2	93	50.874	Rhinopithecus_bieti
ENSKMAG00000001393	vars2	96	50.286	ENSRROG00000043847	VARS2	93	50.777	Rhinopithecus_roxellana
ENSKMAG00000001393	vars2	97	49.401	ENSSBOG00000033240	VARS2	91	50.047	Saimiri_boliviensis_boliviensis
ENSKMAG00000001393	vars2	98	50.840	ENSSHAG00000009307	VARS2	94	51.591	Sarcophilus_harrisii
ENSKMAG00000001393	vars2	97	67.391	ENSSFOG00015016187	vars2	99	65.806	Scleropages_formosus
ENSKMAG00000001393	vars2	94	80.836	ENSSMAG00000020842	vars2	99	80.836	Scophthalmus_maximus
ENSKMAG00000001393	vars2	99	78.913	ENSSDUG00000011598	vars2	99	79.098	Seriola_dumerili
ENSKMAG00000001393	vars2	99	76.746	ENSSLDG00000015492	vars2	99	76.930	Seriola_lalandi_dorsalis
ENSKMAG00000001393	vars2	51	58.519	ENSSARG00000003786	-	61	58.519	Sorex_araneus
ENSKMAG00000001393	vars2	79	59.207	ENSSPUG00000014700	VARS2	87	59.207	Sphenodon_punctatus
ENSKMAG00000001393	vars2	99	76.129	ENSSPAG00000004654	vars2	99	76.129	Stegastes_partitus
ENSKMAG00000001393	vars2	96	51.289	ENSSSCG00000001384	VARS2	90	55.786	Sus_scrofa
ENSKMAG00000001393	vars2	99	70.572	ENSTRUG00000005264	vars2	99	71.013	Takifugu_rubripes
ENSKMAG00000001393	vars2	98	67.857	ENSTNIG00000005916	vars2	96	68.738	Tetraodon_nigroviridis
ENSKMAG00000001393	vars2	81	51.269	ENSTTRG00000012243	VARS2	80	56.098	Tursiops_truncatus
ENSKMAG00000001393	vars2	96	51.947	ENSUAMG00000026124	VARS2	99	53.003	Ursus_americanus
ENSKMAG00000001393	vars2	96	51.806	ENSUMAG00000019894	VARS2	94	51.845	Ursus_maritimus
ENSKMAG00000001393	vars2	97	51.887	ENSVVUG00000010754	VARS2	89	52.132	Vulpes_vulpes
ENSKMAG00000001393	vars2	88	52.249	ENSXETG00000003036	vars2	99	52.249	Xenopus_tropicalis
ENSKMAG00000001393	vars2	97	77.673	ENSXCOG00000003455	vars2	99	77.578	Xiphophorus_couchianus
ENSKMAG00000001393	vars2	100	78.309	ENSXMAG00000013523	vars2	100	78.217	Xiphophorus_maculatus