EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000001588 (Gene tree)
Gene ID: 108245316
Gene Symbol: p4ha1b
Alias: p4ha1|wu:fc69d06|wu:fi27h11|zgc:56058
Full Name: prolyl 4-hydroxylase subunit alpha 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 10984 bases
Position: chrLWHD01000004.1:6812826-6823809
Accession: 108245316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000002036	2OG-FeII_Oxy	PF03171.20	1.3e-08	1	1
ENSKMAP00000002025	2OG-FeII_Oxy	PF03171.20	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000002073	-	3053	XM_017432123	ENSKMAP00000002025	546 (aa)	XP_017287612	UPI0007F87A73
ENSKMAT00000002084	-	3053	XM_017432133	ENSKMAP00000002036	546 (aa)	XP_017287622	UPI0007F938F1

Gene Model

Click here to download ENSKMAG00000001588's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr00330	Arginine and proline metabolism	KEGG
kmr01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000001588's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000001588	p4ha1b	100	63.818	ENSKMAG00000011787	p4ha2	96	65.406

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000001588	p4ha1b	99	74.816	ENSG00000122884	P4HA1	97	75.706	Homo_sapiens
ENSKMAG00000001588	p4ha1b	100	90.110	ENSAPOG00000005170	p4ha1b	97	90.341	Acanthochromis_polyacanthus
ENSKMAG00000001588	p4ha1b	99	74.954	ENSAMEG00000017009	P4HA1	97	75.518	Ailuropoda_melanoleuca
ENSKMAG00000001588	p4ha1b	100	86.837	ENSACIG00000007255	p4ha1b	99	87.214	Amphilophus_citrinellus
ENSKMAG00000001588	p4ha1b	100	89.377	ENSAOCG00000001647	p4ha1b	97	89.366	Amphiprion_ocellaris
ENSKMAG00000001588	p4ha1b	100	89.377	ENSAPEG00000005243	p4ha1b	97	89.366	Amphiprion_percula
ENSKMAG00000001588	p4ha1b	97	64.461	ENSAPEG00000010402	-	97	64.461	Amphiprion_percula
ENSKMAG00000001588	p4ha1b	97	89.962	ENSATEG00000009272	p4ha1b	96	89.962	Anabas_testudineus
ENSKMAG00000001588	p4ha1b	97	75.614	ENSAPLG00000009284	P4HA1	100	74.766	Anas_platyrhynchos
ENSKMAG00000001588	p4ha1b	97	75.758	ENSACAG00000000564	P4HA1	96	75.712	Anolis_carolinensis
ENSKMAG00000001588	p4ha1b	99	75.138	ENSANAG00000024545	P4HA1	96	77.622	Aotus_nancymaae
ENSKMAG00000001588	p4ha1b	97	87.879	ENSACLG00000021556	p4ha1b	96	87.311	Astatotilapia_calliptera
ENSKMAG00000001588	p4ha1b	99	80.258	ENSAMXG00000011123	p4ha1b	97	80.682	Astyanax_mexicanus
ENSKMAG00000001588	p4ha1b	99	74.359	ENSBTAG00000032996	P4HA1	97	75.330	Bos_taurus
ENSKMAG00000001588	p4ha1b	99	75.138	ENSCJAG00000007429	P4HA1	98	80.972	Callithrix_jacchus
ENSKMAG00000001588	p4ha1b	99	74.449	ENSCAFG00000014573	P4HA1	97	75.706	Canis_familiaris
ENSKMAG00000001588	p4ha1b	99	73.567	ENSCAFG00020023993	P4HA1	97	75.769	Canis_lupus_dingo
ENSKMAG00000001588	p4ha1b	99	74.586	ENSCHIG00000013957	P4HA1	97	75.330	Capra_hircus
ENSKMAG00000001588	p4ha1b	99	74.816	ENSTSYG00000004004	P4HA1	100	81.967	Carlito_syrichta
ENSKMAG00000001588	p4ha1b	99	73.985	ENSCPOG00000015701	P4HA1	96	77.622	Cavia_porcellus
ENSKMAG00000001588	p4ha1b	99	74.816	ENSCATG00000029618	P4HA1	96	77.622	Cercocebus_atys
ENSKMAG00000001588	p4ha1b	99	74.265	ENSCLAG00000017260	P4HA1	96	78.322	Chinchilla_lanigera
ENSKMAG00000001588	p4ha1b	99	74.816	ENSCSAG00000008626	P4HA1	97	75.706	Chlorocebus_sabaeus
ENSKMAG00000001588	p4ha1b	99	74.862	ENSCPBG00000007933	P4HA1	96	75.379	Chrysemys_picta_bellii
ENSKMAG00000001588	p4ha1b	99	74.816	ENSCANG00000033147	P4HA1	96	77.622	Colobus_angolensis_palliatus
ENSKMAG00000001588	p4ha1b	99	74.908	ENSCGRG00001007006	P4ha1	96	76.923	Cricetulus_griseus_chok1gshd
ENSKMAG00000001588	p4ha1b	99	74.908	ENSCGRG00000009371	P4ha1	96	76.923	Cricetulus_griseus_crigri
ENSKMAG00000001588	p4ha1b	100	86.081	ENSCSEG00000004939	p4ha1b	97	86.742	Cynoglossus_semilaevis
ENSKMAG00000001588	p4ha1b	100	91.209	ENSCVAG00000016433	p4ha1b	96	91.667	Cyprinodon_variegatus
ENSKMAG00000001588	p4ha1b	97	80.682	ENSDARG00000071082	p4ha1b	97	80.566	Danio_rerio
ENSKMAG00000001588	p4ha1b	96	38.023	ENSDARG00000017038	zgc:152670	93	52.564	Danio_rerio
ENSKMAG00000001588	p4ha1b	98	74.212	ENSDNOG00000013665	P4HA1	91	74.763	Dasypus_novemcinctus
ENSKMAG00000001588	p4ha1b	99	74.586	ENSDORG00000003405	P4ha1	96	78.322	Dipodomys_ordii
ENSKMAG00000001588	p4ha1b	98	60.561	ENSEBUG00000005379	p4ha1b	95	61.420	Eptatretus_burgeri
ENSKMAG00000001588	p4ha1b	97	74.004	ENSEASG00005016606	P4HA1	96	77.622	Equus_asinus_asinus
ENSKMAG00000001588	p4ha1b	99	73.889	ENSECAG00000012496	P4HA1	99	75.816	Equus_caballus
ENSKMAG00000001588	p4ha1b	84	72.549	ENSEEUG00000005542	P4HA1	82	78.261	Erinaceus_europaeus
ENSKMAG00000001588	p4ha1b	99	78.080	ENSELUG00000005913	p4ha1b	99	78.835	Esox_lucius
ENSKMAG00000001588	p4ha1b	99	75.368	ENSFCAG00000018673	P4HA1	97	76.136	Felis_catus
ENSKMAG00000001588	p4ha1b	99	74.586	ENSFALG00000012773	P4HA1	96	75.000	Ficedula_albicollis
ENSKMAG00000001588	p4ha1b	99	67.706	ENSFDAG00000007094	P4HA1	97	68.362	Fukomys_damarensis
ENSKMAG00000001588	p4ha1b	100	91.773	ENSFHEG00000022856	p4ha1b	96	91.871	Fundulus_heteroclitus
ENSKMAG00000001588	p4ha1b	95	79.541	ENSGMOG00000018948	p4ha1b	100	79.238	Gadus_morhua
ENSKMAG00000001588	p4ha1b	99	74.539	ENSGALG00000004325	P4HA1	97	74.906	Gallus_gallus
ENSKMAG00000001588	p4ha1b	100	91.941	ENSGAFG00000019818	p4ha1b	97	91.791	Gambusia_affinis
ENSKMAG00000001588	p4ha1b	97	86.038	ENSGACG00000010233	p4ha1b	97	86.038	Gasterosteus_aculeatus
ENSKMAG00000001588	p4ha1b	99	74.816	ENSGGOG00000015551	P4HA1	96	77.622	Gorilla_gorilla
ENSKMAG00000001588	p4ha1b	97	87.879	ENSHBUG00000015524	p4ha1b	96	87.311	Haplochromis_burtoni
ENSKMAG00000001588	p4ha1b	99	73.993	ENSHGLG00000011764	P4HA1	96	77.622	Heterocephalus_glaber_female
ENSKMAG00000001588	p4ha1b	95	89.168	ENSHCOG00000017152	p4ha1b	100	88.975	Hippocampus_comes
ENSKMAG00000001588	p4ha1b	97	78.220	ENSIPUG00000015157	P4HA1	97	78.030	Ictalurus_punctatus
ENSKMAG00000001588	p4ha1b	99	75.138	ENSSTOG00000027062	P4HA1	96	76.923	Ictidomys_tridecemlineatus
ENSKMAG00000001588	p4ha1b	99	74.081	ENSJJAG00000004232	P4ha1	96	78.322	Jaculus_jaculus
ENSKMAG00000001588	p4ha1b	97	88.258	ENSLBEG00000018911	p4ha1b	96	87.689	Labrus_bergylta
ENSKMAG00000001588	p4ha1b	97	75.660	ENSLACG00000010202	P4HA1	97	74.765	Latimeria_chalumnae
ENSKMAG00000001588	p4ha1b	100	78.832	ENSLOCG00000008546	p4ha1b	95	80.303	Lepisosteus_oculatus
ENSKMAG00000001588	p4ha1b	99	75.092	ENSLAFG00000002652	P4HA1	97	75.706	Loxodonta_africana
ENSKMAG00000001588	p4ha1b	99	74.816	ENSMFAG00000030507	P4HA1	96	77.622	Macaca_fascicularis
ENSKMAG00000001588	p4ha1b	99	71.691	ENSMMUG00000011274	P4HA1	96	77.622	Macaca_mulatta
ENSKMAG00000001588	p4ha1b	99	73.198	ENSMNEG00000011433	P4HA1	95	75.591	Macaca_nemestrina
ENSKMAG00000001588	p4ha1b	95	71.154	ENSMLEG00000043338	P4HA1	100	84.426	Mandrillus_leucophaeus
ENSKMAG00000001588	p4ha1b	100	88.828	ENSMAMG00000015854	p4ha1b	97	89.962	Mastacembelus_armatus
ENSKMAG00000001588	p4ha1b	97	88.068	ENSMZEG00005027421	p4ha1b	96	87.500	Maylandia_zebra
ENSKMAG00000001588	p4ha1b	99	74.081	ENSMGAG00000005554	P4HA1	100	74.859	Meleagris_gallopavo
ENSKMAG00000001588	p4ha1b	99	60.734	ENSMAUG00000011056	P4ha1	93	67.412	Mesocricetus_auratus
ENSKMAG00000001588	p4ha1b	99	74.954	ENSMICG00000031365	P4HA1	96	77.622	Microcebus_murinus
ENSKMAG00000001588	p4ha1b	99	74.217	ENSMOCG00000017531	P4ha1	96	76.224	Microtus_ochrogaster
ENSKMAG00000001588	p4ha1b	100	87.546	ENSMMOG00000008022	p4ha1b	98	87.313	Mola_mola
ENSKMAG00000001588	p4ha1b	99	76.155	ENSMODG00000000121	P4HA1	96	77.273	Monodelphis_domestica
ENSKMAG00000001588	p4ha1b	97	91.304	ENSMALG00000019674	p4ha1b	96	91.288	Monopterus_albus
ENSKMAG00000001588	p4ha1b	99	73.897	MGP_CAROLIEiJ_G0015342	P4ha1	96	76.224	Mus_caroli
ENSKMAG00000001588	p4ha1b	99	73.897	ENSMUSG00000019916	P4ha1	96	76.224	Mus_musculus
ENSKMAG00000001588	p4ha1b	99	74.081	MGP_PahariEiJ_G0030758	P4ha1	96	76.923	Mus_pahari
ENSKMAG00000001588	p4ha1b	99	73.897	MGP_SPRETEiJ_G0016153	P4ha1	96	76.224	Mus_spretus
ENSKMAG00000001588	p4ha1b	99	75.641	ENSMPUG00000003940	P4HA1	97	75.895	Mustela_putorius_furo
ENSKMAG00000001588	p4ha1b	99	74.861	ENSMLUG00000006548	P4HA1	97	75.518	Myotis_lucifugus
ENSKMAG00000001588	p4ha1b	99	74.954	ENSNGAG00000014487	P4ha1	96	77.622	Nannospalax_galili
ENSKMAG00000001588	p4ha1b	97	87.689	ENSNBRG00000014791	p4ha1b	96	87.476	Neolamprologus_brichardi
ENSKMAG00000001588	p4ha1b	99	65.441	ENSNLEG00000035416	P4HA1	99	81.743	Nomascus_leucogenys
ENSKMAG00000001588	p4ha1b	91	68.283	ENSMEUG00000010326	P4HA1	95	67.131	Notamacropus_eugenii
ENSKMAG00000001588	p4ha1b	99	65.867	ENSOPRG00000000990	P4HA1	89	71.193	Ochotona_princeps
ENSKMAG00000001588	p4ha1b	86	73.585	ENSODEG00000015164	P4HA1	96	78.322	Octodon_degus
ENSKMAG00000001588	p4ha1b	97	89.015	ENSONIG00000000737	p4ha1b	86	89.015	Oreochromis_niloticus
ENSKMAG00000001588	p4ha1b	80	76.606	ENSOANG00000001125	-	100	76.606	Ornithorhynchus_anatinus
ENSKMAG00000001588	p4ha1b	99	74.170	ENSOCUG00000009739	P4HA1	97	75.189	Oryctolagus_cuniculus
ENSKMAG00000001588	p4ha1b	97	86.441	ENSORLG00000005147	p4ha1b	100	86.346	Oryzias_latipes
ENSKMAG00000001588	p4ha1b	97	86.441	ENSORLG00020010911	p4ha1b	96	86.629	Oryzias_latipes_hni
ENSKMAG00000001588	p4ha1b	89	86.735	ENSORLG00015016175	p4ha1b	98	84.677	Oryzias_latipes_hsok
ENSKMAG00000001588	p4ha1b	97	87.736	ENSOMEG00000009962	p4ha1b	97	88.512	Oryzias_melastigma
ENSKMAG00000001588	p4ha1b	99	73.761	ENSOGAG00000003483	P4HA1	97	75.094	Otolemur_garnettii
ENSKMAG00000001588	p4ha1b	99	74.586	ENSOARG00000007348	P4HA1	97	75.330	Ovis_aries
ENSKMAG00000001588	p4ha1b	99	69.104	ENSPPAG00000030135	P4HA1	100	84.426	Pan_paniscus
ENSKMAG00000001588	p4ha1b	99	75.184	ENSPPRG00000002655	P4HA1	97	76.136	Panthera_pardus
ENSKMAG00000001588	p4ha1b	99	75.184	ENSPTIG00000007711	P4HA1	97	76.136	Panthera_tigris_altaica
ENSKMAG00000001588	p4ha1b	99	70.037	ENSPTRG00000002619	P4HA1	96	77.622	Pan_troglodytes
ENSKMAG00000001588	p4ha1b	99	74.816	ENSPANG00000022355	P4HA1	96	77.622	Papio_anubis
ENSKMAG00000001588	p4ha1b	99	79.228	ENSPKIG00000000438	p4ha1b	96	80.303	Paramormyrops_kingsleyae
ENSKMAG00000001588	p4ha1b	99	75.092	ENSPSIG00000016298	P4HA1	97	74.296	Pelodiscus_sinensis
ENSKMAG00000001588	p4ha1b	99	81.387	ENSPMGG00000007593	p4ha1b	96	83.048	Periophthalmus_magnuspinnatus
ENSKMAG00000001588	p4ha1b	99	74.033	ENSPEMG00000006561	P4ha1	96	76.923	Peromyscus_maniculatus_bairdii
ENSKMAG00000001588	p4ha1b	99	75.416	ENSPCIG00000018768	P4HA1	97	75.701	Phascolarctos_cinereus
ENSKMAG00000001588	p4ha1b	100	92.125	ENSPFOG00000018574	p4ha1b	97	91.978	Poecilia_formosa
ENSKMAG00000001588	p4ha1b	100	92.308	ENSPLAG00000012628	p4ha1b	98	96.689	Poecilia_latipinna
ENSKMAG00000001588	p4ha1b	100	92.125	ENSPMEG00000024082	p4ha1b	97	91.978	Poecilia_mexicana
ENSKMAG00000001588	p4ha1b	100	92.674	ENSPREG00000010003	p4ha1b	97	92.537	Poecilia_reticulata
ENSKMAG00000001588	p4ha1b	99	74.816	ENSPPYG00000002348	P4HA1	97	75.706	Pongo_abelii
ENSKMAG00000001588	p4ha1b	95	68.522	ENSPCOG00000017553	P4HA1	100	84.836	Propithecus_coquereli
ENSKMAG00000001588	p4ha1b	99	67.407	ENSPVAG00000012989	P4HA1	97	67.992	Pteropus_vampyrus
ENSKMAG00000001588	p4ha1b	97	88.068	ENSPNYG00000002443	p4ha1b	96	87.500	Pundamilia_nyererei
ENSKMAG00000001588	p4ha1b	99	80.331	ENSPNAG00000023149	p4ha1b	97	82.008	Pygocentrus_nattereri
ENSKMAG00000001588	p4ha1b	99	73.985	ENSRNOG00000050655	P4ha1	97	75.189	Rattus_norvegicus
ENSKMAG00000001588	p4ha1b	99	65.993	ENSRBIG00000035304	P4HA1	97	66.667	Rhinopithecus_bieti
ENSKMAG00000001588	p4ha1b	99	74.954	ENSRROG00000044078	P4HA1	96	77.622	Rhinopithecus_roxellana
ENSKMAG00000001588	p4ha1b	71	73.282	ENSSHAG00000008056	P4HA1	100	73.791	Sarcophilus_harrisii
ENSKMAG00000001588	p4ha1b	99	78.860	ENSSFOG00015009176	p4ha1b	100	79.691	Scleropages_formosus
ENSKMAG00000001588	p4ha1b	100	88.828	ENSSMAG00000019199	p4ha1b	97	89.205	Scophthalmus_maximus
ENSKMAG00000001588	p4ha1b	97	91.667	ENSSDUG00000016587	p4ha1b	96	91.098	Seriola_dumerili
ENSKMAG00000001588	p4ha1b	97	91.667	ENSSLDG00000016261	p4ha1b	96	91.098	Seriola_lalandi_dorsalis
ENSKMAG00000001588	p4ha1b	99	71.587	ENSSARG00000003275	P4HA1	97	72.128	Sorex_araneus
ENSKMAG00000001588	p4ha1b	99	75.138	ENSSPUG00000002624	P4HA1	96	75.758	Sphenodon_punctatus
ENSKMAG00000001588	p4ha1b	86	88.421	ENSSPAG00000011193	p4ha1b	100	88.421	Stegastes_partitus
ENSKMAG00000001588	p4ha1b	99	74.770	ENSSSCG00000010292	P4HA1	97	75.330	Sus_scrofa
ENSKMAG00000001588	p4ha1b	99	74.586	ENSTGUG00000004364	-	97	75.000	Taeniopygia_guttata
ENSKMAG00000001588	p4ha1b	100	87.591	ENSTRUG00000004081	p4ha1b	97	88.346	Takifugu_rubripes
ENSKMAG00000001588	p4ha1b	100	85.165	ENSTNIG00000017021	p4ha1b	97	85.985	Tetraodon_nigroviridis
ENSKMAG00000001588	p4ha1b	99	74.401	ENSTTRG00000009782	P4HA1	97	75.000	Tursiops_truncatus
ENSKMAG00000001588	p4ha1b	99	75.641	ENSUMAG00000009024	P4HA1	97	75.895	Ursus_maritimus
ENSKMAG00000001588	p4ha1b	99	66.543	ENSVPAG00000007253	P4HA1	97	67.235	Vicugna_pacos
ENSKMAG00000001588	p4ha1b	99	74.449	ENSVVUG00000022660	P4HA1	97	75.706	Vulpes_vulpes
ENSKMAG00000001588	p4ha1b	100	69.636	ENSXETG00000006154	p4ha1	96	70.865	Xenopus_tropicalis
ENSKMAG00000001588	p4ha1b	97	91.729	ENSXCOG00000010262	p4ha1b	97	91.525	Xiphophorus_couchianus
ENSKMAG00000001588	p4ha1b	100	90.659	ENSXMAG00000003889	p4ha1b	96	91.856	Xiphophorus_maculatus