EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000001591 (Gene tree)
Gene ID: 108238473
Gene Symbol: twistnb
Alias: -
Full Name: TWIST neighbor
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 3815 bases
Position: chrLWHD01000003.1:3485280-3489094
Accession: 108238473
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000002034	SHS2_Rpb7-N	PF03876.17	5.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000002082	-	2585	XM_017420602	ENSKMAP00000002034	370 (aa)	XP_017276091	UPI0007F8644C

Gene Model

Click here to download ENSKMAG00000001591's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000001591's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000001591	twistnb	54	55.392	ENSG00000105849	TWISTNB	54	57.609	Homo_sapiens
ENSKMAG00000001591	twistnb	100	68.490	ENSAPOG00000011796	twistnb	100	68.586	Acanthochromis_polyacanthus
ENSKMAG00000001591	twistnb	97	63.271	ENSACIG00000020400	twistnb	98	61.749	Amphilophus_citrinellus
ENSKMAG00000001591	twistnb	99	65.707	ENSAOCG00000024200	twistnb	99	68.947	Amphiprion_ocellaris
ENSKMAG00000001591	twistnb	99	66.492	ENSAPEG00000016750	twistnb	99	68.684	Amphiprion_percula
ENSKMAG00000001591	twistnb	94	67.606	ENSATEG00000017956	twistnb	99	63.467	Anabas_testudineus
ENSKMAG00000001591	twistnb	54	54.500	ENSANAG00000026418	TWISTNB	54	56.522	Aotus_nancymaae
ENSKMAG00000001591	twistnb	100	60.743	ENSACLG00000022280	twistnb	94	60.212	Astatotilapia_calliptera
ENSKMAG00000001591	twistnb	62	53.043	ENSAMXG00000035868	twistnb	56	60.326	Astyanax_mexicanus
ENSKMAG00000001591	twistnb	54	55.224	ENSBTAG00000006721	TWISTNB	60	52.427	Bos_taurus
ENSKMAG00000001591	twistnb	56	53.991	ENSCJAG00000001148	TWISTNB	54	57.609	Callithrix_jacchus
ENSKMAG00000001591	twistnb	54	55.276	ENSCAFG00000002511	TWISTNB	51	58.046	Canis_familiaris
ENSKMAG00000001591	twistnb	56	53.302	ENSCHIG00000024078	TWISTNB	59	54.082	Capra_hircus
ENSKMAG00000001591	twistnb	52	57.216	ENSTSYG00000001471	TWISTNB	51	58.621	Carlito_syrichta
ENSKMAG00000001591	twistnb	56	55.238	ENSCPOG00000031651	TWISTNB	54	58.242	Cavia_porcellus
ENSKMAG00000001591	twistnb	57	52.804	ENSCCAG00000026416	TWISTNB	61	53.110	Cebus_capucinus
ENSKMAG00000001591	twistnb	56	55.238	ENSCATG00000035621	TWISTNB	54	57.609	Cercocebus_atys
ENSKMAG00000001591	twistnb	54	57.000	ENSCLAG00000012696	TWISTNB	51	59.770	Chinchilla_lanigera
ENSKMAG00000001591	twistnb	54	54.902	ENSCSAG00000013544	TWISTNB	54	57.065	Chlorocebus_sabaeus
ENSKMAG00000001591	twistnb	50	58.602	ENSCPBG00000000367	TWISTNB	55	60.345	Chrysemys_picta_bellii
ENSKMAG00000001591	twistnb	54	55.392	ENSCANG00000038759	TWISTNB	61	53.110	Colobus_angolensis_palliatus
ENSKMAG00000001591	twistnb	50	57.838	ENSCGRG00001000499	Twistnb	53	58.621	Cricetulus_griseus_chok1gshd
ENSKMAG00000001591	twistnb	96	67.204	ENSCVAG00000014324	twistnb	99	66.492	Cyprinodon_variegatus
ENSKMAG00000001591	twistnb	54	56.436	ENSDNOG00000006438	-	64	50.926	Dasypus_novemcinctus
ENSKMAG00000001591	twistnb	52	58.763	ENSDORG00000007795	Twistnb	54	59.770	Dipodomys_ordii
ENSKMAG00000001591	twistnb	69	47.445	ENSEASG00005021702	TWISTNB	64	50.885	Equus_asinus_asinus
ENSKMAG00000001591	twistnb	56	55.024	ENSECAG00000014563	TWISTNB	64	50.885	Equus_caballus
ENSKMAG00000001591	twistnb	98	52.055	ENSELUG00000000098	TWISTNB	99	51.507	Esox_lucius
ENSKMAG00000001591	twistnb	54	55.941	ENSFCAG00000025987	TWISTNB	64	51.643	Felis_catus
ENSKMAG00000001591	twistnb	96	71.831	ENSFHEG00000013318	twistnb	99	71.117	Fundulus_heteroclitus
ENSKMAG00000001591	twistnb	96	68.595	ENSGAFG00000018309	twistnb	99	69.169	Gambusia_affinis
ENSKMAG00000001591	twistnb	68	67.331	ENSGACG00000006425	twistnb	91	67.470	Gasterosteus_aculeatus
ENSKMAG00000001591	twistnb	57	54.673	ENSGGOG00000026888	TWISTNB	54	57.609	Gorilla_gorilla
ENSKMAG00000001591	twistnb	100	60.743	ENSHBUG00000020155	twistnb	94	60.212	Haplochromis_burtoni
ENSKMAG00000001591	twistnb	53	57.360	ENSHGLG00000010976	TWISTNB	52	59.770	Heterocephalus_glaber_female
ENSKMAG00000001591	twistnb	53	57.360	ENSHGLG00100005410	TWISTNB	52	59.770	Heterocephalus_glaber_male
ENSKMAG00000001591	twistnb	80	64.646	ENSHCOG00000010590	twistnb	72	64.646	Hippocampus_comes
ENSKMAG00000001591	twistnb	67	51.406	ENSIPUG00000004117	twistnb	60	56.019	Ictalurus_punctatus
ENSKMAG00000001591	twistnb	54	55.941	ENSJJAG00000015887	Twistnb	54	58.621	Jaculus_jaculus
ENSKMAG00000001591	twistnb	100	63.446	ENSLBEG00000024225	twistnb	100	63.947	Labrus_bergylta
ENSKMAG00000001591	twistnb	88	44.311	ENSLACG00000010508	TWISTNB	51	61.017	Latimeria_chalumnae
ENSKMAG00000001591	twistnb	54	56.931	ENSLAFG00000008755	TWISTNB	52	58.621	Loxodonta_africana
ENSKMAG00000001591	twistnb	57	54.206	ENSMFAG00000045328	TWISTNB	63	51.402	Macaca_fascicularis
ENSKMAG00000001591	twistnb	57	54.206	ENSMMUG00000009609	TWISTNB	63	51.402	Macaca_mulatta
ENSKMAG00000001591	twistnb	57	53.738	ENSMNEG00000041159	TWISTNB	63	51.402	Macaca_nemestrina
ENSKMAG00000001591	twistnb	57	54.673	ENSMLEG00000042783	TWISTNB	54	57.609	Mandrillus_leucophaeus
ENSKMAG00000001591	twistnb	100	60.743	ENSMZEG00005007561	twistnb	94	60.212	Maylandia_zebra
ENSKMAG00000001591	twistnb	57	55.140	ENSMICG00000036489	TWISTNB	55	58.152	Microcebus_murinus
ENSKMAG00000001591	twistnb	100	58.462	ENSMMOG00000020085	twistnb	100	58.974	Mola_mola
ENSKMAG00000001591	twistnb	100	56.218	ENSMALG00000016407	twistnb	100	55.216	Monopterus_albus
ENSKMAG00000001591	twistnb	50	57.838	MGP_CAROLIEiJ_G0017692	Twistnb	53	59.195	Mus_caroli
ENSKMAG00000001591	twistnb	50	57.297	ENSMUSG00000020561	Twistnb	53	58.621	Mus_musculus
ENSKMAG00000001591	twistnb	53	55.051	MGP_PahariEiJ_G0029450	Twistnb	53	57.471	Mus_pahari
ENSKMAG00000001591	twistnb	50	57.297	MGP_SPRETEiJ_G0018534	Twistnb	53	58.621	Mus_spretus
ENSKMAG00000001591	twistnb	100	57.825	ENSNBRG00000008652	twistnb	100	59.151	Neolamprologus_brichardi
ENSKMAG00000001591	twistnb	53	55.838	ENSNLEG00000035755	TWISTNB	61	53.110	Nomascus_leucogenys
ENSKMAG00000001591	twistnb	55	54.854	ENSODEG00000007222	TWISTNB	55	56.989	Octodon_degus
ENSKMAG00000001591	twistnb	96	60.753	ENSORLG00000004005	twistnb	88	59.786	Oryzias_latipes
ENSKMAG00000001591	twistnb	100	60.686	ENSORLG00020002579	twistnb	100	58.947	Oryzias_latipes_hni
ENSKMAG00000001591	twistnb	100	60.950	ENSORLG00015013403	twistnb	89	61.316	Oryzias_latipes_hsok
ENSKMAG00000001591	twistnb	54	55.392	ENSOGAG00000009189	TWISTNB	56	54.315	Otolemur_garnettii
ENSKMAG00000001591	twistnb	53	55.330	ENSOARG00000009803	TWISTNB	59	52.427	Ovis_aries
ENSKMAG00000001591	twistnb	54	55.392	ENSPPAG00000034623	TWISTNB	54	57.609	Pan_paniscus
ENSKMAG00000001591	twistnb	54	55.941	ENSPPRG00000005877	TWISTNB	64	52.381	Panthera_pardus
ENSKMAG00000001591	twistnb	54	55.392	ENSPTRG00000018962	TWISTNB	54	57.609	Pan_troglodytes
ENSKMAG00000001591	twistnb	56	55.238	ENSPANG00000015736	TWISTNB	54	57.609	Papio_anubis
ENSKMAG00000001591	twistnb	54	61.692	ENSPKIG00000025635	twistnb	51	63.388	Paramormyrops_kingsleyae
ENSKMAG00000001591	twistnb	95	60.548	ENSPMGG00000019023	twistnb	94	58.221	Periophthalmus_magnuspinnatus
ENSKMAG00000001591	twistnb	76	43.151	ENSPCIG00000017456	TWISTNB	51	58.333	Phascolarctos_cinereus
ENSKMAG00000001591	twistnb	57	55.140	ENSPPYG00000017752	TWISTNB	54	58.152	Pongo_abelii
ENSKMAG00000001591	twistnb	54	55.392	ENSPCOG00000017601	TWISTNB	54	58.152	Propithecus_coquereli
ENSKMAG00000001591	twistnb	52	56.923	ENSPVAG00000015574	TWISTNB	50	59.649	Pteropus_vampyrus
ENSKMAG00000001591	twistnb	100	60.477	ENSPNYG00000002674	twistnb	100	59.947	Pundamilia_nyererei
ENSKMAG00000001591	twistnb	51	57.754	ENSPNAG00000011956	twistnb	50	58.333	Pygocentrus_nattereri
ENSKMAG00000001591	twistnb	52	57.436	ENSRNOG00000010750	Twistnb	54	59.770	Rattus_norvegicus
ENSKMAG00000001591	twistnb	54	55.392	ENSRBIG00000043007	TWISTNB	60	53.110	Rhinopithecus_bieti
ENSKMAG00000001591	twistnb	57	54.673	ENSRROG00000040155	TWISTNB	61	53.110	Rhinopithecus_roxellana
ENSKMAG00000001591	twistnb	51	55.789	ENSSBOG00000023188	TWISTNB	54	57.065	Saimiri_boliviensis_boliviensis
ENSKMAG00000001591	twistnb	100	63.947	ENSSMAG00000012792	twistnb	100	65.789	Scophthalmus_maximus
ENSKMAG00000001591	twistnb	100	67.016	ENSSDUG00000007038	twistnb	100	67.277	Seriola_dumerili
ENSKMAG00000001591	twistnb	100	70.292	ENSSPAG00000005871	twistnb	100	70.292	Stegastes_partitus
ENSKMAG00000001591	twistnb	54	55.446	ENSSSCG00000025298	TWISTNB	64	49.074	Sus_scrofa
ENSKMAG00000001591	twistnb	88	55.917	ENSTNIG00000017778	twistnb	91	56.452	Tetraodon_nigroviridis
ENSKMAG00000001591	twistnb	56	55.981	ENSTBEG00000003554	TWISTNB	63	52.582	Tupaia_belangeri
ENSKMAG00000001591	twistnb	54	55.941	ENSUAMG00000017593	TWISTNB	56	56.614	Ursus_americanus
ENSKMAG00000001591	twistnb	54	55.446	ENSUMAG00000022203	TWISTNB	56	56.085	Ursus_maritimus
ENSKMAG00000001591	twistnb	54	55.779	ENSVVUG00000008386	TWISTNB	52	58.621	Vulpes_vulpes
ENSKMAG00000001591	twistnb	96	70.787	ENSXCOG00000020199	twistnb	99	69.022	Xiphophorus_couchianus