EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000001873 (Gene tree)
Gene ID: 108242806
Gene Symbol: srrm4
Alias: ZnSR100|im:7136231|si:dkey-1k23.1
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 51714 bases
Position: chrLWHD01000106.1:283826-335539
Accession: 108242806
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000002422	SRRM_C	PF15230.6	3.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000002473	-	2370	XM_017427883	ENSKMAP00000002422	594 (aa)	XP_017283372	UPI0007F8990B

Gene Model

Click here to download ENSKMAG00000001873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000001873's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000001873	srrm4	100	72.524	ENSAPOG00000010969	srrm4	97	70.395	Acanthochromis_polyacanthus
ENSKMAG00000001873	srrm4	100	70.654	ENSAOCG00000019891	srrm4	97	70.346	Amphiprion_ocellaris
ENSKMAG00000001873	srrm4	58	45.352	ENSDARG00000086327	srrm4	86	45.508	Danio_rerio
ENSKMAG00000001873	srrm4	61	52.308	ENSELUG00000004986	srrm4	79	52.778	Esox_lucius
ENSKMAG00000001873	srrm4	79	48.460	ENSGMOG00000006714	srrm4	63	53.106	Gadus_morhua
ENSKMAG00000001873	srrm4	99	67.799	ENSHBUG00000010505	srrm4	97	69.508	Haplochromis_burtoni
ENSKMAG00000001873	srrm4	100	66.507	ENSLBEG00000008471	srrm4	97	68.144	Labrus_bergylta
ENSKMAG00000001873	srrm4	90	68.638	ENSMALG00000001422	srrm4	96	68.488	Monopterus_albus
ENSKMAG00000001873	srrm4	99	70.794	ENSONIG00000010552	srrm4	97	69.494	Oreochromis_niloticus
ENSKMAG00000001873	srrm4	100	62.520	ENSOMEG00000012376	srrm4	91	60.354	Oryzias_melastigma
ENSKMAG00000001873	srrm4	64	69.643	ENSPMGG00000008387	srrm4	59	78.947	Periophthalmus_magnuspinnatus
ENSKMAG00000001873	srrm4	72	64.222	ENSPFOG00000014600	srrm4	93	64.269	Poecilia_formosa
ENSKMAG00000001873	srrm4	62	94.444	ENSPNYG00000007785	srrm4	69	94.444	Pundamilia_nyererei
ENSKMAG00000001873	srrm4	99	71.266	ENSXMAG00000002658	srrm4	95	69.167	Xiphophorus_maculatus