EuRBPDB

Description

Ensembl ID: ENSKMAG00000001916 (Gene tree)
Gene ID: -
Gene Symbol: taf15
Alias: fa11g05|wu:fa11g05|wu:fc02g02|zgc:158363
Full Name: TAF15 RNA polymerase II%2C TATA box binding protein (TBP)-associated factor
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 5218 bases
Position: chrLWHD01000076.1:433319-438536
Accession: ZDB-GENE-061215-102
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000002524	zf-RanBP	PF00641.18	4.9e-09	1	1
ENSKMAP00000002524	RRM_1	PF00076.22	1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000002575	-	1305	-	ENSKMAP00000002524	434 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000001916	taf15	51	73.307	ENSATEG00000006084	taf15	72	67.816	Anabas_testudineus
ENSKMAG00000001916	taf15	57	77.953	ENSCVAG00000008349	taf15	55	75.093	Cyprinodon_variegatus
ENSKMAG00000001916	taf15	59	69.434	ENSFHEG00000002789	taf15	53	77.130	Fundulus_heteroclitus
ENSKMAG00000001916	taf15	61	69.737	ENSGAFG00000007198	taf15	51	74.797	Gambusia_affinis
ENSKMAG00000001916	taf15	72	62.125	ENSOMEG00000003065	taf15	51	71.429	Oryzias_melastigma
ENSKMAG00000001916	taf15	61	62.290	ENSSMAG00000019869	taf15	56	69.421	Scophthalmus_maximus
ENSKMAG00000001916	taf15	70	68.914	ENSXCOG00000012853	taf15	51	89.172	Xiphophorus_couchianus
ENSKMAG00000001916	taf15	74	65.070	ENSXMAG00000010983	taf15	51	73.251	Xiphophorus_maculatus