EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000001929 (Gene tree)
Gene ID: 108234753
Gene Symbol: cpeb1b
Alias: cepb1b|fd15c06|wu:fd15c06|zorba
Full Name: cytoplasmic polyadenylation element binding protein 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 9797 bases
Position: chrLWHD01000029.1:1193260-1203056
Accession: 108234753
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000002576	RRM_1	PF00076.22	2.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000002602	-	1682	XM_017414183	ENSKMAP00000002551	545 (aa)	XP_017269672	-
ENSKMAT00000002628	-	1704	XM_017414185	ENSKMAP00000002576	567 (aa)	XP_017269674	-

Gene Model

Click here to download ENSKMAG00000001929's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr04114	Oocyte meiosis	KEGG
kmr04914	Progesterone-mediated oocyte maturation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000001929's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000001929	cpeb1b	94	61.111	ENSAMXG00000014189	cpeb1a	91	61.905	Astyanax_mexicanus
ENSKMAG00000001929	cpeb1b	88	92.200	ENSCVAG00000004909	cpeb1b	100	91.800	Cyprinodon_variegatus
ENSKMAG00000001929	cpeb1b	50	60.211	FBgn0004882	orb	50	60.211	Drosophila_melanogaster
ENSKMAG00000001929	cpeb1b	75	40.961	ENSEBUG00000008914	-	75	43.784	Eptatretus_burgeri
ENSKMAG00000001929	cpeb1b	94	62.825	ENSPNAG00000004246	cpeb1a	90	63.514	Pygocentrus_nattereri