EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000001956 (Gene tree)
Gene ID: 108248534
Gene Symbol: imp3
Alias: zgc:56526
Full Name: IMP3%2C U3 small nucleolar ribonucleoprotein
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 6978 bases
Position: chrLWHD01000350.1:156970-163947
Accession: 108248534
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000002555	S4	PF01479.25	1.4e-07	1	1
ENSKMAP00000002555	Ribosomal_S4	PF00163.19	2.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000002606	-	3161	XM_017437364	ENSKMAP00000002555	183 (aa)	XP_017292853	UPI0007F8D178

Gene Model

Click here to download ENSKMAG00000001956's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000001956's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000001956	imp3	100	93.989	ENSAPOG00000014720	imp3	100	93.989	Acanthochromis_polyacanthus
ENSKMAG00000001956	imp3	100	69.565	ENSAMEG00000019247	IMP3	100	69.565	Ailuropoda_melanoleuca
ENSKMAG00000001956	imp3	98	91.061	ENSACIG00000022070	imp3	96	91.061	Amphilophus_citrinellus
ENSKMAG00000001956	imp3	100	94.536	ENSAOCG00000015761	imp3	100	94.536	Amphiprion_ocellaris
ENSKMAG00000001956	imp3	100	93.989	ENSAPEG00000005250	imp3	100	93.989	Amphiprion_percula
ENSKMAG00000001956	imp3	100	93.443	ENSATEG00000020021	imp3	100	93.443	Anabas_testudineus
ENSKMAG00000001956	imp3	100	67.380	ENSACAG00000016259	IMP3	100	67.380	Anolis_carolinensis
ENSKMAG00000001956	imp3	99	57.692	ENSANAG00000036874	-	99	57.692	Aotus_nancymaae
ENSKMAG00000001956	imp3	100	67.935	ENSANAG00000016669	-	100	67.935	Aotus_nancymaae
ENSKMAG00000001956	imp3	100	92.350	ENSACLG00000009929	imp3	100	92.350	Astatotilapia_calliptera
ENSKMAG00000001956	imp3	96	86.286	ENSAMXG00000018715	imp3	99	86.286	Astyanax_mexicanus
ENSKMAG00000001956	imp3	99	52.747	WBGene00016740	C48B6.2	99	52.747	Caenorhabditis_elegans
ENSKMAG00000001956	imp3	100	67.935	ENSCJAG00000044585	IMP3	100	67.935	Callithrix_jacchus
ENSKMAG00000001956	imp3	100	66.848	ENSCAFG00000018039	IMP3	82	66.848	Canis_familiaris
ENSKMAG00000001956	imp3	100	66.848	ENSCAFG00020003760	-	100	66.848	Canis_lupus_dingo
ENSKMAG00000001956	imp3	100	56.522	ENSCAFG00020006737	-	100	55.978	Canis_lupus_dingo
ENSKMAG00000001956	imp3	100	69.022	ENSCHIG00000006295	IMP3	100	69.022	Capra_hircus
ENSKMAG00000001956	imp3	100	68.478	ENSTSYG00000005503	IMP3	100	68.478	Carlito_syrichta
ENSKMAG00000001956	imp3	100	69.022	ENSCPOG00000012016	IMP3	100	69.022	Cavia_porcellus
ENSKMAG00000001956	imp3	100	67.935	ENSCCAG00000002712	-	100	67.935	Cebus_capucinus
ENSKMAG00000001956	imp3	98	60.000	ENSCCAG00000023378	-	99	58.621	Cebus_capucinus
ENSKMAG00000001956	imp3	100	68.478	ENSCATG00000015188	IMP3	100	68.478	Cercocebus_atys
ENSKMAG00000001956	imp3	100	68.478	ENSCSAG00000019732	IMP3	100	68.478	Chlorocebus_sabaeus
ENSKMAG00000001956	imp3	100	69.022	ENSCHOG00000012046	IMP3	100	69.022	Choloepus_hoffmanni
ENSKMAG00000001956	imp3	100	64.324	ENSCPBG00000021662	IMP3	100	64.324	Chrysemys_picta_bellii
ENSKMAG00000001956	imp3	99	67.403	ENSCING00000004233	-	100	67.403	Ciona_intestinalis
ENSKMAG00000001956	imp3	99	68.508	ENSCSAVG00000000698	-	100	68.508	Ciona_savignyi
ENSKMAG00000001956	imp3	100	68.478	ENSCANG00000018342	IMP3	100	68.478	Colobus_angolensis_palliatus
ENSKMAG00000001956	imp3	100	67.391	ENSCGRG00001001326	Imp3	100	67.391	Cricetulus_griseus_chok1gshd
ENSKMAG00000001956	imp3	100	67.391	ENSCGRG00000018907	Imp3	100	67.391	Cricetulus_griseus_crigri
ENSKMAG00000001956	imp3	99	89.011	ENSCSEG00000017200	imp3	99	89.011	Cynoglossus_semilaevis
ENSKMAG00000001956	imp3	100	81.579	ENSCVAG00000019511	imp3	100	81.579	Cyprinodon_variegatus
ENSKMAG00000001956	imp3	100	84.153	ENSDARG00000115266	imp3	100	84.153	Danio_rerio
ENSKMAG00000001956	imp3	100	67.935	ENSDNOG00000015787	IMP3	81	67.935	Dasypus_novemcinctus
ENSKMAG00000001956	imp3	100	66.848	ENSDORG00000029301	Imp3	100	66.848	Dipodomys_ordii
ENSKMAG00000001956	imp3	99	62.431	FBgn0034232	CG4866	100	62.431	Drosophila_melanogaster
ENSKMAG00000001956	imp3	100	70.109	ENSETEG00000004278	IMP3	100	70.109	Echinops_telfairi
ENSKMAG00000001956	imp3	99	73.077	ENSEBUG00000002343	imp3	100	73.077	Eptatretus_burgeri
ENSKMAG00000001956	imp3	100	67.935	ENSEASG00005015693	IMP3	100	67.935	Equus_asinus_asinus
ENSKMAG00000001956	imp3	100	68.478	ENSECAG00000015786	IMP3	100	68.478	Equus_caballus
ENSKMAG00000001956	imp3	100	89.617	ENSELUG00000023264	imp3	100	89.617	Esox_lucius
ENSKMAG00000001956	imp3	100	68.478	ENSFCAG00000040328	IMP3	100	68.478	Felis_catus
ENSKMAG00000001956	imp3	71	57.252	ENSFALG00000014811	IMP3	99	59.542	Ficedula_albicollis
ENSKMAG00000001956	imp3	100	69.022	ENSFDAG00000018422	IMP3	100	69.022	Fukomys_damarensis
ENSKMAG00000001956	imp3	100	91.257	ENSFHEG00000016954	imp3	100	91.257	Fundulus_heteroclitus
ENSKMAG00000001956	imp3	100	87.432	ENSGMOG00000018162	imp3	100	87.432	Gadus_morhua
ENSKMAG00000001956	imp3	100	55.676	ENSGALG00000040238	IMP3	100	57.297	Gallus_gallus
ENSKMAG00000001956	imp3	100	92.350	ENSGAFG00000007425	imp3	100	92.350	Gambusia_affinis
ENSKMAG00000001956	imp3	100	89.617	ENSGACG00000015998	imp3	100	89.617	Gasterosteus_aculeatus
ENSKMAG00000001956	imp3	100	62.703	ENSGAGG00000008163	IMP3	100	62.703	Gopherus_agassizii
ENSKMAG00000001956	imp3	100	68.478	ENSGGOG00000025122	IMP3	100	68.478	Gorilla_gorilla
ENSKMAG00000001956	imp3	100	92.896	ENSHBUG00000018453	imp3	100	92.896	Haplochromis_burtoni
ENSKMAG00000001956	imp3	100	68.478	ENSHGLG00000019824	IMP3	100	68.478	Heterocephalus_glaber_female
ENSKMAG00000001956	imp3	100	68.478	ENSHGLG00100020660	IMP3	100	68.478	Heterocephalus_glaber_male
ENSKMAG00000001956	imp3	100	92.350	ENSHCOG00000020565	imp3	100	92.350	Hippocampus_comes
ENSKMAG00000001956	imp3	100	84.699	ENSIPUG00000013142	imp3	100	84.699	Ictalurus_punctatus
ENSKMAG00000001956	imp3	100	69.022	ENSSTOG00000030143	IMP3	100	69.022	Ictidomys_tridecemlineatus
ENSKMAG00000001956	imp3	100	91.803	ENSLBEG00000008178	imp3	100	91.803	Labrus_bergylta
ENSKMAG00000001956	imp3	100	80.874	ENSLACG00000022148	imp3	100	80.874	Latimeria_chalumnae
ENSKMAG00000001956	imp3	100	85.246	ENSLOCG00000010237	imp3	100	85.246	Lepisosteus_oculatus
ENSKMAG00000001956	imp3	99	68.681	ENSLAFG00000004425	IMP3	99	68.681	Loxodonta_africana
ENSKMAG00000001956	imp3	100	68.478	ENSMFAG00000008867	IMP3	100	68.478	Macaca_fascicularis
ENSKMAG00000001956	imp3	100	68.478	ENSMMUG00000016103	IMP3	100	68.478	Macaca_mulatta
ENSKMAG00000001956	imp3	100	68.478	ENSMNEG00000026328	IMP3	100	68.478	Macaca_nemestrina
ENSKMAG00000001956	imp3	100	93.443	ENSMAMG00000003215	imp3	100	93.443	Mastacembelus_armatus
ENSKMAG00000001956	imp3	100	92.350	ENSMZEG00005005544	imp3	100	92.350	Maylandia_zebra
ENSKMAG00000001956	imp3	100	67.935	ENSMAUG00000010279	Imp3	100	67.935	Mesocricetus_auratus
ENSKMAG00000001956	imp3	100	68.478	ENSMICG00000044149	IMP3	100	68.478	Microcebus_murinus
ENSKMAG00000001956	imp3	100	68.478	ENSMOCG00000008647	Imp3	100	68.478	Microtus_ochrogaster
ENSKMAG00000001956	imp3	96	92.571	ENSMMOG00000018117	imp3	84	92.571	Mola_mola
ENSKMAG00000001956	imp3	100	67.935	ENSMODG00000025193	IMP3	100	67.935	Monodelphis_domestica
ENSKMAG00000001956	imp3	100	92.350	ENSMALG00000006505	imp3	100	92.350	Monopterus_albus
ENSKMAG00000001956	imp3	100	67.391	MGP_CAROLIEiJ_G0032258	Imp3	100	67.391	Mus_caroli
ENSKMAG00000001956	imp3	100	67.391	ENSMUSG00000032288	Imp3	100	67.391	Mus_musculus
ENSKMAG00000001956	imp3	100	67.391	MGP_PahariEiJ_G0015125	Imp3	100	67.391	Mus_pahari
ENSKMAG00000001956	imp3	100	67.391	MGP_SPRETEiJ_G0033398	Imp3	100	67.391	Mus_spretus
ENSKMAG00000001956	imp3	100	67.935	ENSMPUG00000020147	IMP3	100	67.935	Mustela_putorius_furo
ENSKMAG00000001956	imp3	100	68.478	ENSMLUG00000014032	IMP3	100	68.478	Myotis_lucifugus
ENSKMAG00000001956	imp3	100	66.304	ENSNGAG00000017248	Imp3	100	66.304	Nannospalax_galili
ENSKMAG00000001956	imp3	100	92.350	ENSNBRG00000004060	imp3	100	92.350	Neolamprologus_brichardi
ENSKMAG00000001956	imp3	100	68.478	ENSOPRG00000015906	-	100	68.478	Ochotona_princeps
ENSKMAG00000001956	imp3	100	69.022	ENSODEG00000020194	IMP3	100	69.022	Octodon_degus
ENSKMAG00000001956	imp3	100	92.350	ENSONIG00000010661	imp3	100	92.350	Oreochromis_niloticus
ENSKMAG00000001956	imp3	100	68.478	ENSOCUG00000004690	IMP3	100	68.478	Oryctolagus_cuniculus
ENSKMAG00000001956	imp3	100	91.257	ENSORLG00000004484	imp3	100	91.257	Oryzias_latipes
ENSKMAG00000001956	imp3	100	91.257	ENSORLG00020003771	imp3	100	91.257	Oryzias_latipes_hni
ENSKMAG00000001956	imp3	100	90.710	ENSORLG00015006933	imp3	100	90.710	Oryzias_latipes_hsok
ENSKMAG00000001956	imp3	100	91.803	ENSOMEG00000016160	imp3	100	91.803	Oryzias_melastigma
ENSKMAG00000001956	imp3	100	68.478	ENSOGAG00000004917	IMP3	100	68.478	Otolemur_garnettii
ENSKMAG00000001956	imp3	100	68.478	ENSPPAG00000009241	IMP3	100	68.478	Pan_paniscus
ENSKMAG00000001956	imp3	100	68.478	ENSPPRG00000018701	IMP3	100	68.478	Panthera_pardus
ENSKMAG00000001956	imp3	100	68.478	ENSPTRG00000052235	IMP3	100	68.478	Pan_troglodytes
ENSKMAG00000001956	imp3	100	68.478	ENSPANG00000013668	IMP3	100	68.478	Papio_anubis
ENSKMAG00000001956	imp3	100	86.885	ENSPKIG00000007169	imp3	100	86.885	Paramormyrops_kingsleyae
ENSKMAG00000001956	imp3	100	82.796	ENSPMGG00000009379	imp3	100	82.796	Periophthalmus_magnuspinnatus
ENSKMAG00000001956	imp3	100	67.391	ENSPEMG00000013003	Imp3	100	67.391	Peromyscus_maniculatus_bairdii
ENSKMAG00000001956	imp3	100	92.350	ENSPFOG00000016529	imp3	100	92.350	Poecilia_formosa
ENSKMAG00000001956	imp3	100	92.896	ENSPLAG00000013831	imp3	100	92.896	Poecilia_latipinna
ENSKMAG00000001956	imp3	100	91.803	ENSPMEG00000000797	imp3	100	91.803	Poecilia_mexicana
ENSKMAG00000001956	imp3	100	92.350	ENSPREG00000006885	imp3	100	92.350	Poecilia_reticulata
ENSKMAG00000001956	imp3	100	69.022	ENSPPYG00000006664	IMP3	100	69.022	Pongo_abelii
ENSKMAG00000001956	imp3	99	69.231	ENSPCAG00000006920	IMP3	99	69.231	Procavia_capensis
ENSKMAG00000001956	imp3	100	68.478	ENSPCOG00000012367	IMP3	100	68.478	Propithecus_coquereli
ENSKMAG00000001956	imp3	100	69.022	ENSPVAG00000010036	IMP3	100	69.022	Pteropus_vampyrus
ENSKMAG00000001956	imp3	100	92.350	ENSPNYG00000000324	imp3	100	92.350	Pundamilia_nyererei
ENSKMAG00000001956	imp3	100	87.978	ENSPNAG00000017113	imp3	100	87.978	Pygocentrus_nattereri
ENSKMAG00000001956	imp3	100	67.391	ENSRNOG00000017460	Imp3	100	67.391	Rattus_norvegicus
ENSKMAG00000001956	imp3	100	69.022	ENSRBIG00000024522	IMP3	100	69.022	Rhinopithecus_bieti
ENSKMAG00000001956	imp3	100	69.022	ENSRROG00000024157	IMP3	100	69.022	Rhinopithecus_roxellana
ENSKMAG00000001956	imp3	99	53.297	YHR148W	-	99	53.297	Saccharomyces_cerevisiae
ENSKMAG00000001956	imp3	99	59.341	ENSSBOG00000026404	-	99	59.341	Saimiri_boliviensis_boliviensis
ENSKMAG00000001956	imp3	100	67.935	ENSSBOG00000006542	-	100	67.935	Saimiri_boliviensis_boliviensis
ENSKMAG00000001956	imp3	99	65.385	ENSSHAG00000006200	IMP3	99	65.385	Sarcophilus_harrisii
ENSKMAG00000001956	imp3	99	87.363	ENSSFOG00015012483	imp3	99	87.363	Scleropages_formosus
ENSKMAG00000001956	imp3	100	91.257	ENSSMAG00000007865	imp3	100	91.257	Scophthalmus_maximus
ENSKMAG00000001956	imp3	100	93.443	ENSSDUG00000010594	imp3	100	93.443	Seriola_dumerili
ENSKMAG00000001956	imp3	100	93.443	ENSSLDG00000015587	imp3	100	93.443	Seriola_lalandi_dorsalis
ENSKMAG00000001956	imp3	100	69.022	ENSSARG00000009657	IMP3	100	69.022	Sorex_araneus
ENSKMAG00000001956	imp3	100	91.803	ENSSPAG00000002088	imp3	100	91.803	Stegastes_partitus
ENSKMAG00000001956	imp3	100	56.757	ENSTGUG00000013228	IMP3	100	58.378	Taeniopygia_guttata
ENSKMAG00000001956	imp3	99	91.209	ENSTRUG00000025783	imp3	99	91.209	Takifugu_rubripes
ENSKMAG00000001956	imp3	100	69.022	ENSUAMG00000022724	IMP3	100	69.022	Ursus_americanus
ENSKMAG00000001956	imp3	100	69.022	ENSUMAG00000003736	IMP3	100	69.022	Ursus_maritimus
ENSKMAG00000001956	imp3	100	67.391	ENSVVUG00000019589	IMP3	100	67.391	Vulpes_vulpes
ENSKMAG00000001956	imp3	96	93.143	ENSXCOG00000007392	imp3	96	93.143	Xiphophorus_couchianus
ENSKMAG00000001956	imp3	100	93.443	ENSXMAG00000023049	imp3	100	93.443	Xiphophorus_maculatus