EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000001987 (Gene tree)
Gene ID: 108243345
Gene Symbol: EDC3 (1 of many)
Alias: -
Full Name: enhancer of mRNA-decapping protein 3
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 18588 bases
Position: chrLWHD01000115.1:945689-964276
Accession: 108243345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000002580	FDF	PF09532.10	6.8e-10	1	1
ENSKMAP00000002593	FDF	PF09532.10	6.8e-10	1	1
ENSKMAP00000002580	LSM14	PF12701.7	3.6e-08	1	1
ENSKMAP00000002593	LSM14	PF12701.7	3.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000002632	EDC3 (1 of many)-201	3754	XM_017428712	ENSKMAP00000002580	471 (aa)	XP_017284201	UPI0007F8A4EC
ENSKMAT00000002645	EDC3 (1 of many)-202	3668	XM_017428711	ENSKMAP00000002593	471 (aa)	XP_017284200	UPI0007F8A4EC

Gene Model

Click here to download ENSKMAG00000001987's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000001987's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000001987	EDC3	100	63.711	ENSKMAG00000001243	edc3	100	63.505

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000001987	EDC3	100	55.750	ENSG00000179151	EDC3	100	74.074	Homo_sapiens
ENSKMAG00000001987	EDC3	100	71.457	ENSAPOG00000008655	EDC3	100	71.457	Acanthochromis_polyacanthus
ENSKMAG00000001987	EDC3	100	64.108	ENSAPOG00000010791	edc3	100	64.108	Acanthochromis_polyacanthus
ENSKMAG00000001987	EDC3	100	55.709	ENSAMEG00000008963	EDC3	100	55.709	Ailuropoda_melanoleuca
ENSKMAG00000001987	EDC3	99	75.152	ENSACIG00000005330	EDC3	99	75.152	Amphilophus_citrinellus
ENSKMAG00000001987	EDC3	100	63.278	ENSACIG00000017751	edc3	100	63.278	Amphilophus_citrinellus
ENSKMAG00000001987	EDC3	100	64.315	ENSAOCG00000005431	edc3	100	64.315	Amphiprion_ocellaris
ENSKMAG00000001987	EDC3	100	78.361	ENSAOCG00000009103	-	100	78.361	Amphiprion_ocellaris
ENSKMAG00000001987	EDC3	100	64.315	ENSAPEG00000000968	edc3	100	64.315	Amphiprion_percula
ENSKMAG00000001987	EDC3	100	78.571	ENSAPEG00000007841	EDC3	100	78.571	Amphiprion_percula
ENSKMAG00000001987	EDC3	100	77.167	ENSATEG00000004205	-	100	77.167	Anabas_testudineus
ENSKMAG00000001987	EDC3	100	64.938	ENSATEG00000015505	edc3	100	64.938	Anabas_testudineus
ENSKMAG00000001987	EDC3	88	55.188	ENSAPLG00000008957	EDC3	99	55.188	Anas_platyrhynchos
ENSKMAG00000001987	EDC3	76	52.500	ENSACAG00000000460	-	100	52.500	Anolis_carolinensis
ENSKMAG00000001987	EDC3	100	56.102	ENSANAG00000024078	EDC3	100	56.102	Aotus_nancymaae
ENSKMAG00000001987	EDC3	100	63.900	ENSACLG00000007232	edc3	100	63.900	Astatotilapia_calliptera
ENSKMAG00000001987	EDC3	99	76.008	ENSACLG00000018776	-	99	76.008	Astatotilapia_calliptera
ENSKMAG00000001987	EDC3	100	61.886	ENSAMXG00000001589	edc3	100	61.886	Astyanax_mexicanus
ENSKMAG00000001987	EDC3	100	55.315	ENSBTAG00000007308	EDC3	100	55.315	Bos_taurus
ENSKMAG00000001987	EDC3	100	55.709	ENSCJAG00000017681	EDC3	100	55.709	Callithrix_jacchus
ENSKMAG00000001987	EDC3	100	55.512	ENSCAFG00000017935	EDC3	100	55.512	Canis_familiaris
ENSKMAG00000001987	EDC3	100	55.512	ENSCAFG00020003909	EDC3	100	55.512	Canis_lupus_dingo
ENSKMAG00000001987	EDC3	100	55.512	ENSCHIG00000023658	EDC3	100	55.512	Capra_hircus
ENSKMAG00000001987	EDC3	100	55.709	ENSTSYG00000004822	EDC3	100	55.709	Carlito_syrichta
ENSKMAG00000001987	EDC3	100	56.102	ENSCPOG00000015595	EDC3	100	56.102	Cavia_porcellus
ENSKMAG00000001987	EDC3	100	55.709	ENSCCAG00000021663	EDC3	100	55.709	Cebus_capucinus
ENSKMAG00000001987	EDC3	100	55.750	ENSCATG00000037511	EDC3	100	55.750	Cercocebus_atys
ENSKMAG00000001987	EDC3	100	56.496	ENSCLAG00000005700	EDC3	100	56.496	Chinchilla_lanigera
ENSKMAG00000001987	EDC3	100	55.750	ENSCSAG00000014239	EDC3	100	55.750	Chlorocebus_sabaeus
ENSKMAG00000001987	EDC3	99	56.522	ENSCPBG00000024239	EDC3	99	56.522	Chrysemys_picta_bellii
ENSKMAG00000001987	EDC3	99	35.714	ENSCING00000022142	-	99	35.714	Ciona_intestinalis
ENSKMAG00000001987	EDC3	100	55.750	ENSCANG00000028699	EDC3	100	55.750	Colobus_angolensis_palliatus
ENSKMAG00000001987	EDC3	100	55.945	ENSCGRG00001013874	Edc3	100	55.945	Cricetulus_griseus_chok1gshd
ENSKMAG00000001987	EDC3	100	55.945	ENSCGRG00000011885	Edc3	100	55.945	Cricetulus_griseus_crigri
ENSKMAG00000001987	EDC3	99	65.208	ENSCSEG00000012996	edc3	99	65.208	Cynoglossus_semilaevis
ENSKMAG00000001987	EDC3	100	64.449	ENSCVAG00000008023	edc3	100	64.449	Cyprinodon_variegatus
ENSKMAG00000001987	EDC3	99	59.496	ENSDARG00000051931	edc3	99	59.496	Danio_rerio
ENSKMAG00000001987	EDC3	100	49.425	ENSDNOG00000030661	EDC3	100	49.425	Dasypus_novemcinctus
ENSKMAG00000001987	EDC3	70	74.074	ENSETEG00000002398	-	64	74.074	Echinops_telfairi
ENSKMAG00000001987	EDC3	100	56.102	ENSEASG00005005071	EDC3	100	56.102	Equus_asinus_asinus
ENSKMAG00000001987	EDC3	100	56.102	ENSECAG00000017994	EDC3	100	56.102	Equus_caballus
ENSKMAG00000001987	EDC3	100	62.781	ENSELUG00000005794	edc3	100	62.781	Esox_lucius
ENSKMAG00000001987	EDC3	100	66.736	ENSELUG00000007607	EDC3	100	66.736	Esox_lucius
ENSKMAG00000001987	EDC3	100	55.709	ENSFCAG00000002014	EDC3	100	55.709	Felis_catus
ENSKMAG00000001987	EDC3	98	54.509	ENSFALG00000004543	EDC3	96	54.509	Ficedula_albicollis
ENSKMAG00000001987	EDC3	100	56.299	ENSFDAG00000012582	EDC3	100	56.299	Fukomys_damarensis
ENSKMAG00000001987	EDC3	100	63.278	ENSFHEG00000009375	edc3	100	63.278	Fundulus_heteroclitus
ENSKMAG00000001987	EDC3	100	64.634	ENSGMOG00000002715	edc3	100	65.631	Gadus_morhua
ENSKMAG00000001987	EDC3	99	56.719	ENSGALG00000040181	EDC3	99	56.719	Gallus_gallus
ENSKMAG00000001987	EDC3	100	63.147	ENSGAFG00000014433	edc3	100	63.354	Gambusia_affinis
ENSKMAG00000001987	EDC3	99	66.339	ENSGACG00000014671	EDC3	99	66.339	Gasterosteus_aculeatus
ENSKMAG00000001987	EDC3	100	63.693	ENSGACG00000009783	edc3	100	63.693	Gasterosteus_aculeatus
ENSKMAG00000001987	EDC3	99	56.719	ENSGAGG00000023477	EDC3	99	56.719	Gopherus_agassizii
ENSKMAG00000001987	EDC3	100	55.906	ENSGGOG00000003552	EDC3	100	55.906	Gorilla_gorilla
ENSKMAG00000001987	EDC3	100	63.900	ENSHBUG00000003635	edc3	100	63.900	Haplochromis_burtoni
ENSKMAG00000001987	EDC3	99	76.221	ENSHBUG00000020817	EDC3	99	76.221	Haplochromis_burtoni
ENSKMAG00000001987	EDC3	100	63.466	ENSHCOG00000016834	edc3	100	63.883	Hippocampus_comes
ENSKMAG00000001987	EDC3	99	61.493	ENSIPUG00000005695	edc3	99	61.493	Ictalurus_punctatus
ENSKMAG00000001987	EDC3	100	55.642	ENSSTOG00000013936	EDC3	100	55.642	Ictidomys_tridecemlineatus
ENSKMAG00000001987	EDC3	100	55.906	ENSJJAG00000008074	Edc3	100	55.906	Jaculus_jaculus
ENSKMAG00000001987	EDC3	100	62.729	ENSLBEG00000013435	edc3	99	62.525	Labrus_bergylta
ENSKMAG00000001987	EDC3	100	74.268	ENSLBEG00000017984	EDC3	100	74.268	Labrus_bergylta
ENSKMAG00000001987	EDC3	99	57.885	ENSLACG00000014149	EDC3	99	57.885	Latimeria_chalumnae
ENSKMAG00000001987	EDC3	99	56.556	ENSLOCG00000014625	edc3	99	57.534	Lepisosteus_oculatus
ENSKMAG00000001987	EDC3	100	55.273	ENSLAFG00000002992	EDC3	100	55.273	Loxodonta_africana
ENSKMAG00000001987	EDC3	100	55.945	ENSMFAG00000043074	EDC3	100	55.945	Macaca_fascicularis
ENSKMAG00000001987	EDC3	100	55.945	ENSMMUG00000011071	EDC3	100	55.945	Macaca_mulatta
ENSKMAG00000001987	EDC3	100	55.945	ENSMNEG00000035316	EDC3	100	55.945	Macaca_nemestrina
ENSKMAG00000001987	EDC3	100	55.750	ENSMLEG00000030372	EDC3	100	55.750	Mandrillus_leucophaeus
ENSKMAG00000001987	EDC3	100	63.115	ENSMAMG00000000505	edc3	100	63.655	Mastacembelus_armatus
ENSKMAG00000001987	EDC3	99	78.981	ENSMAMG00000005423	-	99	78.981	Mastacembelus_armatus
ENSKMAG00000001987	EDC3	99	74.895	ENSMZEG00005005654	EDC3	99	74.895	Maylandia_zebra
ENSKMAG00000001987	EDC3	100	63.693	ENSMZEG00005004892	edc3	100	63.693	Maylandia_zebra
ENSKMAG00000001987	EDC3	99	56.917	ENSMGAG00000002617	EDC3	99	56.917	Meleagris_gallopavo
ENSKMAG00000001987	EDC3	100	55.315	ENSMICG00000043190	EDC3	100	55.315	Microcebus_murinus
ENSKMAG00000001987	EDC3	100	55.945	ENSMOCG00000016205	Edc3	100	55.945	Microtus_ochrogaster
ENSKMAG00000001987	EDC3	99	64.792	ENSMMOG00000012278	edc3	99	64.792	Mola_mola
ENSKMAG00000001987	EDC3	99	55.336	ENSMODG00000009442	EDC3	99	55.336	Monodelphis_domestica
ENSKMAG00000001987	EDC3	100	64.108	ENSMALG00000008658	edc3	100	64.108	Monopterus_albus
ENSKMAG00000001987	EDC3	100	56.102	MGP_CAROLIEiJ_G0032280	Edc3	100	72.308	Mus_caroli
ENSKMAG00000001987	EDC3	100	55.906	ENSMUSG00000038957	Edc3	100	72.308	Mus_musculus
ENSKMAG00000001987	EDC3	100	56.102	MGP_PahariEiJ_G0015146	Edc3	100	72.308	Mus_pahari
ENSKMAG00000001987	EDC3	100	55.906	MGP_SPRETEiJ_G0033420	Edc3	100	72.308	Mus_spretus
ENSKMAG00000001987	EDC3	100	55.556	ENSMPUG00000017293	EDC3	100	55.556	Mustela_putorius_furo
ENSKMAG00000001987	EDC3	100	55.534	ENSMLUG00000016382	EDC3	100	55.534	Myotis_lucifugus
ENSKMAG00000001987	EDC3	100	55.750	ENSNGAG00000010923	Edc3	100	55.750	Nannospalax_galili
ENSKMAG00000001987	EDC3	100	63.693	ENSNBRG00000002434	edc3	100	63.693	Neolamprologus_brichardi
ENSKMAG00000001987	EDC3	99	74.583	ENSNBRG00000007881	EDC3	99	74.583	Neolamprologus_brichardi
ENSKMAG00000001987	EDC3	100	47.835	ENSNLEG00000014577	EDC3	100	47.835	Nomascus_leucogenys
ENSKMAG00000001987	EDC3	99	57.143	ENSMEUG00000009077	EDC3	99	57.143	Notamacropus_eugenii
ENSKMAG00000001987	EDC3	82	74.074	ENSOPRG00000009540	-	79	74.074	Ochotona_princeps
ENSKMAG00000001987	EDC3	100	63.693	ENSONIG00000008434	edc3	100	63.693	Oreochromis_niloticus
ENSKMAG00000001987	EDC3	99	70.955	ENSONIG00000002932	-	99	70.955	Oreochromis_niloticus
ENSKMAG00000001987	EDC3	76	51.637	ENSOCUG00000017740	EDC3	86	51.637	Oryctolagus_cuniculus
ENSKMAG00000001987	EDC3	100	62.112	ENSORLG00000004883	edc3	100	62.112	Oryzias_latipes
ENSKMAG00000001987	EDC3	100	79.536	ENSORLG00000014399	-	98	79.536	Oryzias_latipes
ENSKMAG00000001987	EDC3	100	79.325	ENSORLG00020019446	-	100	79.325	Oryzias_latipes_hni
ENSKMAG00000001987	EDC3	100	62.526	ENSORLG00020012262	edc3	100	62.526	Oryzias_latipes_hni
ENSKMAG00000001987	EDC3	100	62.526	ENSORLG00015005634	edc3	100	62.526	Oryzias_latipes_hsok
ENSKMAG00000001987	EDC3	100	79.325	ENSORLG00015017635	-	96	79.325	Oryzias_latipes_hsok
ENSKMAG00000001987	EDC3	100	63.693	ENSOMEG00000014026	edc3	100	63.693	Oryzias_melastigma
ENSKMAG00000001987	EDC3	100	80.802	ENSOMEG00000017354	EDC3	100	80.802	Oryzias_melastigma
ENSKMAG00000001987	EDC3	100	55.512	ENSOGAG00000014441	EDC3	100	55.512	Otolemur_garnettii
ENSKMAG00000001987	EDC3	100	55.403	ENSOARG00000003476	EDC3	100	55.403	Ovis_aries
ENSKMAG00000001987	EDC3	100	55.906	ENSPPAG00000040143	EDC3	100	55.906	Pan_paniscus
ENSKMAG00000001987	EDC3	100	55.709	ENSPPRG00000006257	EDC3	100	55.709	Panthera_pardus
ENSKMAG00000001987	EDC3	100	55.709	ENSPTIG00000017424	EDC3	100	55.709	Panthera_tigris_altaica
ENSKMAG00000001987	EDC3	100	55.906	ENSPTRG00000007279	EDC3	100	55.906	Pan_troglodytes
ENSKMAG00000001987	EDC3	100	55.750	ENSPANG00000015997	EDC3	100	55.750	Papio_anubis
ENSKMAG00000001987	EDC3	100	60.980	ENSPKIG00000019810	EDC3	100	60.980	Paramormyrops_kingsleyae
ENSKMAG00000001987	EDC3	99	60.156	ENSPKIG00000004416	edc3	99	60.352	Paramormyrops_kingsleyae
ENSKMAG00000001987	EDC3	99	52.372	ENSPSIG00000008474	EDC3	99	53.360	Pelodiscus_sinensis
ENSKMAG00000001987	EDC3	100	62.292	ENSPMGG00000007223	edc3	100	62.292	Periophthalmus_magnuspinnatus
ENSKMAG00000001987	EDC3	100	55.709	ENSPEMG00000015260	Edc3	100	55.709	Peromyscus_maniculatus_bairdii
ENSKMAG00000001987	EDC3	99	55.882	ENSPCIG00000006276	EDC3	70	55.882	Phascolarctos_cinereus
ENSKMAG00000001987	EDC3	100	63.485	ENSPFOG00000012204	edc3	100	63.485	Poecilia_formosa
ENSKMAG00000001987	EDC3	100	63.485	ENSPLAG00000014420	edc3	100	63.485	Poecilia_latipinna
ENSKMAG00000001987	EDC3	100	63.485	ENSPMEG00000023289	edc3	100	63.485	Poecilia_mexicana
ENSKMAG00000001987	EDC3	100	63.278	ENSPREG00000016022	edc3	100	63.278	Poecilia_reticulata
ENSKMAG00000001987	EDC3	100	54.921	ENSPPYG00000006642	EDC3	100	54.921	Pongo_abelii
ENSKMAG00000001987	EDC3	87	74.074	ENSPCAG00000002802	EDC3	80	74.074	Procavia_capensis
ENSKMAG00000001987	EDC3	100	55.512	ENSPCOG00000013364	EDC3	100	55.512	Propithecus_coquereli
ENSKMAG00000001987	EDC3	100	55.361	ENSPVAG00000014733	EDC3	100	55.361	Pteropus_vampyrus
ENSKMAG00000001987	EDC3	100	63.900	ENSPNYG00000021797	edc3	100	63.900	Pundamilia_nyererei
ENSKMAG00000001987	EDC3	99	76.221	ENSPNYG00000009669	EDC3	99	76.221	Pundamilia_nyererei
ENSKMAG00000001987	EDC3	100	61.133	ENSPNAG00000019657	edc3	100	61.133	Pygocentrus_nattereri
ENSKMAG00000001987	EDC3	99	55.842	ENSRNOG00000019579	Edc3	99	55.842	Rattus_norvegicus
ENSKMAG00000001987	EDC3	100	55.750	ENSRBIG00000019488	EDC3	100	55.750	Rhinopithecus_bieti
ENSKMAG00000001987	EDC3	100	55.750	ENSRROG00000034959	EDC3	100	55.750	Rhinopithecus_roxellana
ENSKMAG00000001987	EDC3	100	55.709	ENSSBOG00000004896	EDC3	100	55.709	Saimiri_boliviensis_boliviensis
ENSKMAG00000001987	EDC3	96	54.806	ENSSHAG00000015075	EDC3	95	54.806	Sarcophilus_harrisii
ENSKMAG00000001987	EDC3	100	65.751	ENSSFOG00015002439	edc3	100	65.751	Scleropages_formosus
ENSKMAG00000001987	EDC3	100	62.624	ENSSFOG00015016939	edc3	100	62.109	Scleropages_formosus
ENSKMAG00000001987	EDC3	100	64.315	ENSSMAG00000010695	edc3	100	64.523	Scophthalmus_maximus
ENSKMAG00000001987	EDC3	99	78.132	ENSSMAG00000010176	-	99	78.132	Scophthalmus_maximus
ENSKMAG00000001987	EDC3	100	80.761	ENSSDUG00000007671	EDC3	100	80.761	Seriola_dumerili
ENSKMAG00000001987	EDC3	100	64.315	ENSSDUG00000021844	edc3	100	64.523	Seriola_dumerili
ENSKMAG00000001987	EDC3	100	64.315	ENSSLDG00000022046	edc3	100	64.523	Seriola_lalandi_dorsalis
ENSKMAG00000001987	EDC3	82	70.161	ENSSARG00000003907	EDC3	76	70.161	Sorex_araneus
ENSKMAG00000001987	EDC3	99	55.731	ENSSPUG00000008232	EDC3	99	55.731	Sphenodon_punctatus
ENSKMAG00000001987	EDC3	100	79.622	ENSSPAG00000020327	EDC3	100	79.622	Stegastes_partitus
ENSKMAG00000001987	EDC3	100	64.315	ENSSPAG00000010009	edc3	100	64.315	Stegastes_partitus
ENSKMAG00000001987	EDC3	100	59.158	ENSSSCG00000001903	EDC3	100	59.158	Sus_scrofa
ENSKMAG00000001987	EDC3	99	56.719	ENSTGUG00000004007	EDC3	99	56.719	Taeniopygia_guttata
ENSKMAG00000001987	EDC3	100	63.450	ENSTRUG00000017078	edc3	100	63.450	Takifugu_rubripes
ENSKMAG00000001987	EDC3	100	63.017	ENSTNIG00000016047	edc3	100	63.017	Tetraodon_nigroviridis
ENSKMAG00000001987	EDC3	100	56.522	ENSTTRG00000007990	EDC3	100	56.522	Tursiops_truncatus
ENSKMAG00000001987	EDC3	100	55.709	ENSUAMG00000026710	-	100	55.709	Ursus_americanus
ENSKMAG00000001987	EDC3	100	55.709	ENSUMAG00000005006	EDC3	96	55.709	Ursus_maritimus
ENSKMAG00000001987	EDC3	82	66.667	ENSVPAG00000003499	-	76	66.667	Vicugna_pacos
ENSKMAG00000001987	EDC3	100	55.512	ENSVVUG00000018601	EDC3	100	55.512	Vulpes_vulpes
ENSKMAG00000001987	EDC3	70	64.970	ENSXETG00000010622	edc3	96	65.970	Xenopus_tropicalis
ENSKMAG00000001987	EDC3	100	63.354	ENSXMAG00000007377	edc3	100	63.354	Xiphophorus_maculatus