EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000002038 (Gene tree)
Gene ID: 108245047
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 1927 bases
Position: chrLWHD01000159.1:920486-922412
Accession: 108245047
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000002648	RRM_1	PF00076.22	2.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000002720	-	327	-	ENSKMAP00000002667	108 (aa)	-	-
ENSKMAT00000002702	-	797	XM_017431673	ENSKMAP00000002648	104 (aa)	XP_017287162	UPI0007F8CA2D

Gene Model

Click here to download ENSKMAG00000002038's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000002038's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000002038	slirp	73	47.368	ENSG00000119705	SLIRP	93	49.296	Homo_sapiens
ENSKMAG00000002038	slirp	96	67.000	ENSAPOG00000001298	slirp	100	67.000	Acanthochromis_polyacanthus
ENSKMAG00000002038	slirp	67	44.286	ENSAMEG00000003975	SLIRP	77	44.286	Ailuropoda_melanoleuca
ENSKMAG00000002038	slirp	94	66.327	ENSACIG00000023083	slirp	97	66.327	Amphilophus_citrinellus
ENSKMAG00000002038	slirp	94	67.347	ENSAOCG00000006342	slirp	99	67.347	Amphiprion_ocellaris
ENSKMAG00000002038	slirp	92	67.708	ENSAPEG00000015719	-	98	67.708	Amphiprion_percula
ENSKMAG00000002038	slirp	94	67.347	ENSAPEG00000015917	slirp	99	67.347	Amphiprion_percula
ENSKMAG00000002038	slirp	96	69.000	ENSATEG00000013525	slirp	100	69.000	Anabas_testudineus
ENSKMAG00000002038	slirp	94	56.122	ENSAMXG00000018693	slirp	98	56.122	Astyanax_mexicanus
ENSKMAG00000002038	slirp	95	46.465	ENSCJAG00000016946	SLIRP	85	46.465	Callithrix_jacchus
ENSKMAG00000002038	slirp	87	40.000	ENSCAFG00020015876	-	81	40.000	Canis_lupus_dingo
ENSKMAG00000002038	slirp	89	43.011	ENSCCAG00000030130	SLIRP	81	43.011	Cebus_capucinus
ENSKMAG00000002038	slirp	72	51.316	ENSCATG00000036327	SLIRP	78	51.316	Cercocebus_atys
ENSKMAG00000002038	slirp	85	45.455	ENSCSAG00000011736	SLIRP	81	45.455	Chlorocebus_sabaeus
ENSKMAG00000002038	slirp	78	59.259	ENSCPBG00000026327	SLIRP	82	59.259	Chrysemys_picta_bellii
ENSKMAG00000002038	slirp	72	48.684	ENSCANG00000032892	SLIRP	79	48.052	Colobus_angolensis_palliatus
ENSKMAG00000002038	slirp	99	42.857	ENSCGRG00001024068	Slirp	92	42.857	Cricetulus_griseus_chok1gshd
ENSKMAG00000002038	slirp	99	42.857	ENSCGRG00000017440	Slirp	92	42.857	Cricetulus_griseus_crigri
ENSKMAG00000002038	slirp	81	55.952	ENSCSEG00000015766	slirp	86	55.952	Cynoglossus_semilaevis
ENSKMAG00000002038	slirp	82	69.412	ENSCVAG00000012504	slirp	83	69.412	Cyprinodon_variegatus
ENSKMAG00000002038	slirp	88	65.934	ENSDARG00000097753	slirp	91	65.957	Danio_rerio
ENSKMAG00000002038	slirp	87	45.556	ENSDNOG00000007721	SLIRP	77	45.556	Dasypus_novemcinctus
ENSKMAG00000002038	slirp	88	43.478	ENSDORG00000012379	Slirp	77	43.478	Dipodomys_ordii
ENSKMAG00000002038	slirp	89	48.387	ENSETEG00000010345	SLIRP	81	48.387	Echinops_telfairi
ENSKMAG00000002038	slirp	85	44.318	ENSEASG00005020193	SLIRP	79	44.318	Equus_asinus_asinus
ENSKMAG00000002038	slirp	69	51.389	ENSEEUG00000007257	SLIRP	71	51.389	Erinaceus_europaeus
ENSKMAG00000002038	slirp	92	64.583	ENSELUG00000016800	slirp	95	64.583	Esox_lucius
ENSKMAG00000002038	slirp	81	45.238	ENSFCAG00000036326	SLIRP	84	45.238	Felis_catus
ENSKMAG00000002038	slirp	75	53.846	ENSFALG00000012583	SLIRP	77	52.439	Ficedula_albicollis
ENSKMAG00000002038	slirp	88	47.826	ENSFDAG00000008347	SLIRP	76	47.826	Fukomys_damarensis
ENSKMAG00000002038	slirp	77	68.750	ENSFHEG00000004709	slirp	87	68.750	Fundulus_heteroclitus
ENSKMAG00000002038	slirp	93	60.825	ENSGMOG00000016948	slirp	93	60.825	Gadus_morhua
ENSKMAG00000002038	slirp	75	57.692	ENSGALG00000031238	SLIRP	78	59.459	Gallus_gallus
ENSKMAG00000002038	slirp	96	67.000	ENSGAFG00000010998	slirp	100	67.000	Gambusia_affinis
ENSKMAG00000002038	slirp	79	63.415	ENSGACG00000020137	slirp	95	63.415	Gasterosteus_aculeatus
ENSKMAG00000002038	slirp	94	57.143	ENSGAGG00000009953	SLIRP	68	57.143	Gopherus_agassizii
ENSKMAG00000002038	slirp	73	47.368	ENSGGOG00000011059	-	73	50.000	Gorilla_gorilla
ENSKMAG00000002038	slirp	88	42.391	ENSHGLG00000018491	SLIRP	81	42.391	Heterocephalus_glaber_female
ENSKMAG00000002038	slirp	88	42.391	ENSHGLG00100014153	SLIRP	81	42.391	Heterocephalus_glaber_male
ENSKMAG00000002038	slirp	92	70.833	ENSHCOG00000006795	slirp	97	70.833	Hippocampus_comes
ENSKMAG00000002038	slirp	94	69.388	ENSIPUG00000010214	SLIRP	98	69.388	Ictalurus_punctatus
ENSKMAG00000002038	slirp	87	41.111	ENSSTOG00000034316	SLIRP	81	41.111	Ictidomys_tridecemlineatus
ENSKMAG00000002038	slirp	96	63.000	ENSLBEG00000007564	slirp	100	63.000	Labrus_bergylta
ENSKMAG00000002038	slirp	92	64.583	ENSLACG00000013434	SLIRP	92	64.583	Latimeria_chalumnae
ENSKMAG00000002038	slirp	73	50.649	ENSMFAG00000042960	SLIRP	79	50.649	Macaca_fascicularis
ENSKMAG00000002038	slirp	73	50.649	ENSMMUG00000029256	SLIRP	79	50.649	Macaca_mulatta
ENSKMAG00000002038	slirp	73	50.649	ENSMNEG00000028921	SLIRP	79	50.649	Macaca_nemestrina
ENSKMAG00000002038	slirp	72	51.316	ENSMLEG00000043644	SLIRP	78	51.316	Mandrillus_leucophaeus
ENSKMAG00000002038	slirp	94	70.408	ENSMZEG00005004617	slirp	99	70.408	Maylandia_zebra
ENSKMAG00000002038	slirp	87	38.889	ENSMAUG00000003857	Slirp	81	38.889	Mesocricetus_auratus
ENSKMAG00000002038	slirp	90	45.745	ENSMICG00000012080	SLIRP	80	45.745	Microcebus_murinus
ENSKMAG00000002038	slirp	75	42.308	ENSMOCG00000016019	Slirp	77	42.308	Microtus_ochrogaster
ENSKMAG00000002038	slirp	94	69.388	ENSMMOG00000018268	slirp	98	69.388	Mola_mola
ENSKMAG00000002038	slirp	67	52.857	ENSMODG00000005207	-	99	52.857	Monodelphis_domestica
ENSKMAG00000002038	slirp	86	68.539	ENSMALG00000012581	slirp	91	68.539	Monopterus_albus
ENSKMAG00000002038	slirp	79	43.478	MGP_CAROLIEiJ_G0017995	Slirp	85	43.478	Mus_caroli
ENSKMAG00000002038	slirp	79	43.478	ENSMUSG00000021040	Slirp	92	41.758	Mus_musculus
ENSKMAG00000002038	slirp	79	43.478	MGP_SPRETEiJ_G0018840	Slirp	82	43.478	Mus_spretus
ENSKMAG00000002038	slirp	78	51.852	ENSMLUG00000029544	-	71	51.852	Myotis_lucifugus
ENSKMAG00000002038	slirp	76	53.165	ENSMLUG00000024998	-	71	53.086	Myotis_lucifugus
ENSKMAG00000002038	slirp	66	47.826	ENSNGAG00000016363	Slirp	66	47.826	Nannospalax_galili
ENSKMAG00000002038	slirp	87	41.111	ENSNLEG00000027238	-	80	47.143	Nomascus_leucogenys
ENSKMAG00000002038	slirp	87	41.111	ENSNLEG00000032459	-	78	41.111	Nomascus_leucogenys
ENSKMAG00000002038	slirp	88	42.391	ENSODEG00000012580	SLIRP	76	45.714	Octodon_degus
ENSKMAG00000002038	slirp	94	70.408	ENSONIG00000011692	slirp	99	70.408	Oreochromis_niloticus
ENSKMAG00000002038	slirp	71	55.405	ENSOANG00000022366	SLIRP	67	55.405	Ornithorhynchus_anatinus
ENSKMAG00000002038	slirp	96	68.000	ENSORLG00000010761	slirp	78	68.000	Oryzias_latipes
ENSKMAG00000002038	slirp	96	67.000	ENSORLG00020022188	slirp	100	67.000	Oryzias_latipes_hni
ENSKMAG00000002038	slirp	95	67.677	ENSORLG00015020171	slirp	98	67.677	Oryzias_latipes_hsok
ENSKMAG00000002038	slirp	96	65.000	ENSOMEG00000019321	slirp	100	65.000	Oryzias_melastigma
ENSKMAG00000002038	slirp	73	47.368	ENSPPAG00000040710	-	73	50.000	Pan_paniscus
ENSKMAG00000002038	slirp	73	48.684	ENSPPRG00000014350	SLIRP	76	48.684	Panthera_pardus
ENSKMAG00000002038	slirp	73	48.684	ENSPTIG00000014196	SLIRP	76	48.684	Panthera_tigris_altaica
ENSKMAG00000002038	slirp	87	45.556	ENSPTRG00000030691	SLIRP	80	45.556	Pan_troglodytes
ENSKMAG00000002038	slirp	72	50.000	ENSPANG00000026323	SLIRP	78	50.000	Papio_anubis
ENSKMAG00000002038	slirp	67	62.857	ENSPKIG00000008831	slirp	69	62.857	Paramormyrops_kingsleyae
ENSKMAG00000002038	slirp	77	71.250	ENSPMGG00000010541	slirp	92	71.250	Periophthalmus_magnuspinnatus
ENSKMAG00000002038	slirp	69	48.611	ENSPEMG00000013234	Slirp	70	46.479	Peromyscus_maniculatus_bairdii
ENSKMAG00000002038	slirp	81	52.381	ENSPMAG00000009355	slirp	93	52.381	Petromyzon_marinus
ENSKMAG00000002038	slirp	76	46.835	ENSPCIG00000026842	-	85	46.835	Phascolarctos_cinereus
ENSKMAG00000002038	slirp	94	70.408	ENSPFOG00000006758	slirp	98	70.408	Poecilia_formosa
ENSKMAG00000002038	slirp	94	70.408	ENSPLAG00000011140	slirp	98	70.408	Poecilia_latipinna
ENSKMAG00000002038	slirp	94	70.408	ENSPMEG00000019535	slirp	98	70.408	Poecilia_mexicana
ENSKMAG00000002038	slirp	94	71.429	ENSPREG00000011673	slirp	98	71.429	Poecilia_reticulata
ENSKMAG00000002038	slirp	66	55.072	ENSPPYG00000006030	SLIRP	63	55.072	Pongo_abelii
ENSKMAG00000002038	slirp	90	43.617	ENSPCOG00000015159	SLIRP	80	43.617	Propithecus_coquereli
ENSKMAG00000002038	slirp	95	66.667	ENSPNAG00000008633	slirp	100	66.667	Pygocentrus_nattereri
ENSKMAG00000002038	slirp	64	50.746	ENSRBIG00000032998	-	62	50.746	Rhinopithecus_bieti
ENSKMAG00000002038	slirp	63	52.308	ENSRBIG00000031396	-	65	52.308	Rhinopithecus_bieti
ENSKMAG00000002038	slirp	67	48.571	ENSRBIG00000035817	-	64	48.571	Rhinopithecus_bieti
ENSKMAG00000002038	slirp	88	46.739	ENSRBIG00000032222	-	79	49.351	Rhinopithecus_bieti
ENSKMAG00000002038	slirp	88	46.739	ENSRROG00000036656	-	79	49.351	Rhinopithecus_roxellana
ENSKMAG00000002038	slirp	63	50.769	ENSRROG00000035604	-	65	50.769	Rhinopithecus_roxellana
ENSKMAG00000002038	slirp	72	50.667	ENSRROG00000041312	-	74	50.667	Rhinopithecus_roxellana
ENSKMAG00000002038	slirp	64	52.239	ENSRROG00000017133	-	71	51.471	Rhinopithecus_roxellana
ENSKMAG00000002038	slirp	79	48.780	ENSSBOG00000020014	SLIRP	78	50.667	Saimiri_boliviensis_boliviensis
ENSKMAG00000002038	slirp	90	53.061	ENSSFOG00015011165	slirp	85	61.905	Scleropages_formosus
ENSKMAG00000002038	slirp	96	48.039	ENSSMAG00000012930	slirp	100	48.039	Scophthalmus_maximus
ENSKMAG00000002038	slirp	96	65.000	ENSSDUG00000021883	slirp	66	65.000	Seriola_dumerili
ENSKMAG00000002038	slirp	96	65.000	ENSSLDG00000023136	slirp	91	65.000	Seriola_lalandi_dorsalis
ENSKMAG00000002038	slirp	79	63.953	ENSSPUG00000009346	SLIRP	88	63.953	Sphenodon_punctatus
ENSKMAG00000002038	slirp	96	60.000	ENSSPAG00000013477	slirp	100	60.000	Stegastes_partitus
ENSKMAG00000002038	slirp	87	44.444	ENSSSCG00000028167	SLIRP	81	44.444	Sus_scrofa
ENSKMAG00000002038	slirp	75	55.128	ENSTGUG00000012337	SLIRP	77	53.659	Taeniopygia_guttata
ENSKMAG00000002038	slirp	94	61.616	ENSTRUG00000020127	slirp	98	61.616	Takifugu_rubripes
ENSKMAG00000002038	slirp	87	44.444	ENSUAMG00000022445	SLIRP	81	44.444	Ursus_americanus
ENSKMAG00000002038	slirp	87	43.333	ENSUMAG00000007166	SLIRP	81	43.333	Ursus_maritimus
ENSKMAG00000002038	slirp	83	45.977	ENSVPAG00000001781	SLIRP	81	45.977	Vicugna_pacos
ENSKMAG00000002038	slirp	69	45.833	ENSVVUG00000004436	SLIRP	65	45.833	Vulpes_vulpes
ENSKMAG00000002038	slirp	78	62.963	ENSXETG00000030343	SLIRP	91	62.963	Xenopus_tropicalis
ENSKMAG00000002038	slirp	96	68.000	ENSXCOG00000009422	slirp	100	68.000	Xiphophorus_couchianus
ENSKMAG00000002038	slirp	96	70.000	ENSXMAG00000015655	slirp	100	70.000	Xiphophorus_maculatus