EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000002141 (Gene tree)
Gene ID: 108246188
Gene Symbol: xrcc6
Alias: Ku autoantigen|Ku70|g22p1|wu:fi87b06|zgc:64131
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 10329 bases
Position: chrLWHD01000202.1:549280-559608
Accession: 108246188
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000002841	SAP	PF02037.27	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000002899	-	2198	XM_017433599	ENSKMAP00000002841	610 (aa)	XP_017289088	UPI0007F8DC24

Gene Model

Click here to download ENSKMAG00000002141's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000002141's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000002141	xrcc6	99	55.993	ENSG00000196419	XRCC6	99	56.158	Homo_sapiens
ENSKMAG00000002141	xrcc6	99	86.700	ENSAPOG00000012704	xrcc6	100	86.700	Acanthochromis_polyacanthus
ENSKMAG00000002141	xrcc6	99	85.878	ENSACIG00000021277	xrcc6	99	85.878	Amphilophus_citrinellus
ENSKMAG00000002141	xrcc6	99	86.535	ENSAOCG00000021344	xrcc6	99	86.535	Amphiprion_ocellaris
ENSKMAG00000002141	xrcc6	99	86.535	ENSAPEG00000020712	xrcc6	99	86.535	Amphiprion_percula
ENSKMAG00000002141	xrcc6	99	87.336	ENSATEG00000007119	xrcc6	99	87.336	Anabas_testudineus
ENSKMAG00000002141	xrcc6	90	60.878	ENSAPLG00000004469	XRCC6	98	60.878	Anas_platyrhynchos
ENSKMAG00000002141	xrcc6	99	55.665	ENSANAG00000018684	XRCC6	98	56.881	Aotus_nancymaae
ENSKMAG00000002141	xrcc6	99	50.000	ENSANAG00000020017	-	99	49.505	Aotus_nancymaae
ENSKMAG00000002141	xrcc6	99	49.589	ENSANAG00000035230	-	99	49.589	Aotus_nancymaae
ENSKMAG00000002141	xrcc6	99	46.732	ENSANAG00000023445	-	99	46.895	Aotus_nancymaae
ENSKMAG00000002141	xrcc6	99	86.043	ENSACLG00000018608	xrcc6	99	86.043	Astatotilapia_calliptera
ENSKMAG00000002141	xrcc6	99	77.303	ENSAMXG00000007545	xrcc6	99	77.303	Astyanax_mexicanus
ENSKMAG00000002141	xrcc6	99	55.665	ENSCJAG00000045512	XRCC6	99	55.829	Callithrix_jacchus
ENSKMAG00000002141	xrcc6	99	55.172	ENSTSYG00000011348	XRCC6	99	55.501	Carlito_syrichta
ENSKMAG00000002141	xrcc6	99	52.381	ENSCCAG00000030041	-	94	52.217	Cebus_capucinus
ENSKMAG00000002141	xrcc6	99	44.975	ENSCCAG00000035711	-	99	44.975	Cebus_capucinus
ENSKMAG00000002141	xrcc6	99	46.700	ENSCCAG00000037663	-	96	46.700	Cebus_capucinus
ENSKMAG00000002141	xrcc6	92	54.618	ENSCCAG00000030468	-	99	54.618	Cebus_capucinus
ENSKMAG00000002141	xrcc6	99	56.158	ENSCATG00000042366	XRCC6	99	56.322	Cercocebus_atys
ENSKMAG00000002141	xrcc6	99	56.908	ENSCLAG00000016669	XRCC6	99	56.414	Chinchilla_lanigera
ENSKMAG00000002141	xrcc6	99	56.158	ENSCSAG00000005784	XRCC6	99	56.322	Chlorocebus_sabaeus
ENSKMAG00000002141	xrcc6	99	60.033	ENSCPBG00000020535	XRCC6	99	60.197	Chrysemys_picta_bellii
ENSKMAG00000002141	xrcc6	99	33.934	ENSCING00000000633	-	95	34.596	Ciona_intestinalis
ENSKMAG00000002141	xrcc6	99	56.158	ENSCANG00000031032	XRCC6	99	56.322	Colobus_angolensis_palliatus
ENSKMAG00000002141	xrcc6	99	52.554	ENSCGRG00001019029	Xrcc6	99	52.554	Cricetulus_griseus_chok1gshd
ENSKMAG00000002141	xrcc6	99	57.002	ENSCGRG00000001528	Xrcc6	99	57.002	Cricetulus_griseus_crigri
ENSKMAG00000002141	xrcc6	99	79.475	ENSCSEG00000020434	xrcc6	99	79.475	Cynoglossus_semilaevis
ENSKMAG00000002141	xrcc6	99	86.535	ENSCVAG00000002189	xrcc6	99	86.535	Cyprinodon_variegatus
ENSKMAG00000002141	xrcc6	99	75.698	ENSDARG00000071551	xrcc6	99	75.698	Danio_rerio
ENSKMAG00000002141	xrcc6	78	53.528	ENSETEG00000015333	-	77	53.528	Echinops_telfairi
ENSKMAG00000002141	xrcc6	99	55.428	ENSEASG00005001514	XRCC6	99	56.086	Equus_asinus_asinus
ENSKMAG00000002141	xrcc6	99	55.592	ENSECAG00000017563	XRCC6	99	56.050	Equus_caballus
ENSKMAG00000002141	xrcc6	99	74.548	ENSELUG00000020301	xrcc6	99	74.548	Esox_lucius
ENSKMAG00000002141	xrcc6	99	59.217	ENSFALG00000011908	XRCC6	96	59.380	Ficedula_albicollis
ENSKMAG00000002141	xrcc6	99	89.163	ENSFHEG00000016833	xrcc6	99	89.163	Fundulus_heteroclitus
ENSKMAG00000002141	xrcc6	99	68.893	ENSGMOG00000013524	xrcc6	100	68.893	Gadus_morhua
ENSKMAG00000002141	xrcc6	99	58.537	ENSGALG00000011932	XRCC6	99	58.699	Gallus_gallus
ENSKMAG00000002141	xrcc6	99	85.878	ENSGAFG00000008130	xrcc6	99	85.878	Gambusia_affinis
ENSKMAG00000002141	xrcc6	99	83.713	ENSGACG00000004868	xrcc6	99	83.713	Gasterosteus_aculeatus
ENSKMAG00000002141	xrcc6	99	59.868	ENSGAGG00000017518	XRCC6	99	60.033	Gopherus_agassizii
ENSKMAG00000002141	xrcc6	99	55.829	ENSGGOG00000015885	XRCC6	99	55.993	Gorilla_gorilla
ENSKMAG00000002141	xrcc6	93	86.372	ENSHBUG00000023281	xrcc6	99	86.372	Haplochromis_burtoni
ENSKMAG00000002141	xrcc6	99	56.343	ENSHGLG00000018078	XRCC6	99	56.343	Heterocephalus_glaber_female
ENSKMAG00000002141	xrcc6	99	56.343	ENSHGLG00100011264	XRCC6	99	56.343	Heterocephalus_glaber_male
ENSKMAG00000002141	xrcc6	99	80.131	ENSHCOG00000009821	xrcc6	99	80.131	Hippocampus_comes
ENSKMAG00000002141	xrcc6	99	76.316	ENSIPUG00000000767	xrcc6	99	76.316	Ictalurus_punctatus
ENSKMAG00000002141	xrcc6	99	55.757	ENSSTOG00000009490	XRCC6	99	55.757	Ictidomys_tridecemlineatus
ENSKMAG00000002141	xrcc6	99	52.303	ENSJJAG00000017136	Xrcc6	99	53.289	Jaculus_jaculus
ENSKMAG00000002141	xrcc6	99	85.691	ENSLBEG00000002691	xrcc6	99	85.691	Labrus_bergylta
ENSKMAG00000002141	xrcc6	87	72.000	ENSLOCG00000011533	xrcc6	99	72.000	Lepisosteus_oculatus
ENSKMAG00000002141	xrcc6	99	56.158	ENSMFAG00000003352	XRCC6	99	56.322	Macaca_fascicularis
ENSKMAG00000002141	xrcc6	99	56.158	ENSMMUG00000001856	XRCC6	99	56.322	Macaca_mulatta
ENSKMAG00000002141	xrcc6	99	56.158	ENSMNEG00000035076	XRCC6	99	56.322	Macaca_nemestrina
ENSKMAG00000002141	xrcc6	99	56.158	ENSMLEG00000019869	XRCC6	99	56.322	Mandrillus_leucophaeus
ENSKMAG00000002141	xrcc6	96	83.618	ENSMAMG00000003405	xrcc6	97	83.618	Mastacembelus_armatus
ENSKMAG00000002141	xrcc6	99	84.098	ENSMAMG00000003368	xrcc6	99	84.098	Mastacembelus_armatus
ENSKMAG00000002141	xrcc6	99	85.878	ENSMZEG00005028080	xrcc6	99	85.878	Maylandia_zebra
ENSKMAG00000002141	xrcc6	99	58.699	ENSMGAG00000012146	XRCC6	99	58.862	Meleagris_gallopavo
ENSKMAG00000002141	xrcc6	99	56.672	ENSMAUG00000017340	Xrcc6	99	56.672	Mesocricetus_auratus
ENSKMAG00000002141	xrcc6	99	56.507	ENSMOCG00000015717	Xrcc6	99	56.343	Microtus_ochrogaster
ENSKMAG00000002141	xrcc6	99	83.636	ENSMMOG00000003536	xrcc6	99	83.636	Mola_mola
ENSKMAG00000002141	xrcc6	99	85.550	ENSMALG00000013912	xrcc6	95	85.550	Monopterus_albus
ENSKMAG00000002141	xrcc6	99	53.115	MGP_CAROLIEiJ_G0020067	Xrcc6	99	52.951	Mus_caroli
ENSKMAG00000002141	xrcc6	99	57.049	ENSMUSG00000022471	Xrcc6	99	57.795	Mus_musculus
ENSKMAG00000002141	xrcc6	99	57.213	MGP_PahariEiJ_G0020069	Xrcc6	99	57.049	Mus_pahari
ENSKMAG00000002141	xrcc6	96	57.192	MGP_SPRETEiJ_G0020967	Xrcc6	99	57.192	Mus_spretus
ENSKMAG00000002141	xrcc6	99	56.178	ENSNGAG00000013750	Xrcc6	99	56.013	Nannospalax_galili
ENSKMAG00000002141	xrcc6	99	86.207	ENSNBRG00000004125	xrcc6	99	86.207	Neolamprologus_brichardi
ENSKMAG00000002141	xrcc6	95	57.487	ENSOPRG00000002386	XRCC6	99	57.487	Ochotona_princeps
ENSKMAG00000002141	xrcc6	99	55.974	ENSODEG00000015847	XRCC6	99	55.974	Octodon_degus
ENSKMAG00000002141	xrcc6	99	85.855	ENSONIG00000019715	xrcc6	99	85.855	Oreochromis_niloticus
ENSKMAG00000002141	xrcc6	67	58.394	ENSOANG00000011328	XRCC6	98	58.394	Ornithorhynchus_anatinus
ENSKMAG00000002141	xrcc6	99	56.579	ENSOCUG00000006948	XRCC6	99	57.072	Oryctolagus_cuniculus
ENSKMAG00000002141	xrcc6	99	84.754	ENSORLG00020007820	xrcc6	99	84.754	Oryzias_latipes_hni
ENSKMAG00000002141	xrcc6	99	84.426	ENSORLG00015006406	xrcc6	99	84.426	Oryzias_latipes_hsok
ENSKMAG00000002141	xrcc6	99	85.410	ENSOMEG00000008998	xrcc6	99	85.410	Oryzias_melastigma
ENSKMAG00000002141	xrcc6	99	55.921	ENSOGAG00000008821	XRCC6	99	56.086	Otolemur_garnettii
ENSKMAG00000002141	xrcc6	92	55.858	ENSPPAG00000037167	XRCC6	99	55.858	Pan_paniscus
ENSKMAG00000002141	xrcc6	99	55.993	ENSPTRG00000022548	XRCC6	99	57.045	Pan_troglodytes
ENSKMAG00000002141	xrcc6	99	55.993	ENSPTRG00000045824	XRCC6	99	57.045	Pan_troglodytes
ENSKMAG00000002141	xrcc6	99	55.993	ENSPANG00000001252	XRCC6	97	59.389	Papio_anubis
ENSKMAG00000002141	xrcc6	99	71.217	ENSPKIG00000003974	xrcc6	99	71.217	Paramormyrops_kingsleyae
ENSKMAG00000002141	xrcc6	99	81.229	ENSPMGG00000014220	xrcc6	100	81.395	Periophthalmus_magnuspinnatus
ENSKMAG00000002141	xrcc6	99	56.013	ENSPEMG00000023446	Xrcc6	99	55.848	Peromyscus_maniculatus_bairdii
ENSKMAG00000002141	xrcc6	99	57.661	ENSPCIG00000026409	XRCC6	99	57.661	Phascolarctos_cinereus
ENSKMAG00000002141	xrcc6	99	88.506	ENSPFOG00000017173	xrcc6	99	88.506	Poecilia_formosa
ENSKMAG00000002141	xrcc6	99	88.013	ENSPLAG00000000562	xrcc6	99	88.013	Poecilia_latipinna
ENSKMAG00000002141	xrcc6	99	88.342	ENSPMEG00000018478	xrcc6	99	88.342	Poecilia_mexicana
ENSKMAG00000002141	xrcc6	99	87.889	ENSPREG00000020957	xrcc6	93	87.889	Poecilia_reticulata
ENSKMAG00000002141	xrcc6	99	49.918	ENSPPYG00000011876	XRCC6	99	49.261	Pongo_abelii
ENSKMAG00000002141	xrcc6	99	55.519	ENSPVAG00000001168	XRCC6	99	55.189	Pteropus_vampyrus
ENSKMAG00000002141	xrcc6	99	85.714	ENSPNYG00000003815	xrcc6	99	81.562	Pundamilia_nyererei
ENSKMAG00000002141	xrcc6	99	56.721	ENSRNOG00000006392	Xrcc6	99	56.557	Rattus_norvegicus
ENSKMAG00000002141	xrcc6	99	51.888	ENSRBIG00000039794	XRCC6	98	53.103	Rhinopithecus_bieti
ENSKMAG00000002141	xrcc6	99	56.158	ENSRROG00000030297	XRCC6	99	56.322	Rhinopithecus_roxellana
ENSKMAG00000002141	xrcc6	67	50.739	ENSSBOG00000024724	-	99	50.739	Saimiri_boliviensis_boliviensis
ENSKMAG00000002141	xrcc6	99	56.158	ENSSHAG00000010790	XRCC6	99	56.158	Sarcophilus_harrisii
ENSKMAG00000002141	xrcc6	99	74.836	ENSSFOG00015014409	xrcc6	99	74.836	Scleropages_formosus
ENSKMAG00000002141	xrcc6	99	87.521	ENSSMAG00000006496	xrcc6	99	87.521	Scophthalmus_maximus
ENSKMAG00000002141	xrcc6	99	87.192	ENSSDUG00000007542	xrcc6	99	87.192	Seriola_dumerili
ENSKMAG00000002141	xrcc6	99	86.700	ENSSLDG00000009974	xrcc6	99	86.700	Seriola_lalandi_dorsalis
ENSKMAG00000002141	xrcc6	99	58.814	ENSSPUG00000012086	XRCC6	99	58.979	Sphenodon_punctatus
ENSKMAG00000002141	xrcc6	99	87.521	ENSSPAG00000015199	xrcc6	99	87.521	Stegastes_partitus
ENSKMAG00000002141	xrcc6	95	60.892	ENSTGUG00000009852	-	94	60.892	Taeniopygia_guttata
ENSKMAG00000002141	xrcc6	100	79.508	ENSTRUG00000017070	xrcc6	100	79.508	Takifugu_rubripes
ENSKMAG00000002141	xrcc6	96	78.305	ENSTNIG00000012947	xrcc6	99	78.305	Tetraodon_nigroviridis
ENSKMAG00000002141	xrcc6	95	52.324	ENSTBEG00000011736	XRCC6	99	52.324	Tupaia_belangeri
ENSKMAG00000002141	xrcc6	99	46.645	ENSTTRG00000006749	XRCC6	99	47.463	Tursiops_truncatus
ENSKMAG00000002141	xrcc6	99	88.177	ENSXMAG00000009691	xrcc6	99	88.177	Xiphophorus_maculatus